Identification and molecular evolution of the GLX genes in 21 plant species: a focus on the Gossypium hirsutum

• Published in: BMC genomics 2023-08, Vol.24 (1), p.1-474, Article 474
• Main Authors: Xu, Menglin, Zuo, Dongyun, Wang, Qiaolian, Lv, Limin, Zhang, Youping, Jiao, Huixin, Zhang, Xiang, Yang, Yi, Song, Guoli, Cheng, Hailiang
• Format: Article
• Language: English
• Subjects: Abiotic stress; Acclimatization (Plants); Algae; Analysis; Binding sites; Cotton; Data analysis; Detoxification; Drought; Environmental aspects; Evolution; Evolutionary biology; Evolutionary genetics; Flowers & plants; Genes; Genetic aspects; Genomes; Genomics; Gibberellins; Glutamine; Glyoxalase family; Heat treatment; Heavy metals; High temperature; Homeostasis; Hydroxyacylglutathione hydrolase; Information management; Lactoylglutathione lyase; Lipids; Methods; Molecular evolution; Phylogenetics; Phylogeny; Plant genetics; Plant growth; Plant hormones; Plant species; Plants (botany); Protein interaction; Proteins; Pyruvaldehyde; Salinity; Soils, Salts in; Transcription factors; Transcriptomes; Water shortages
• ISSN: 1471-2164; 1471-2164
• DOI: 10.1186/s12864-023-09524-w

The glyoxalase system includes glyoxalase I (GLXI), glyoxalase II (GLXII) and glyoxalase III (GLXIII), which are responsible for methylglyoxal (MG) detoxification and involved in abiotic stress responses such as drought, salinity and heavy metal. In this study, a total of 620 GLX family genes were identified from 21 different plant species. The results of evolutionary analysis showed that GLX genes exist in all species from lower plants to higher plants, inferring that GLX genes might be important for plants, and GLXI and GLXII account for the majority. In addition, motif showed an expanding trend in the process of evolution. The analysis of cis-acting elements in 21 different plant species showed that the promoter region of the GLX genes were rich in phytohormones and biotic and abiotic stress-related elements, indicating that GLX genes can participate in a variety of life processes. In cotton, GLXs could be divided into two groups and most GLXIs distributed in group I, GLXIIs and GLXIIIs mainly belonged to group II, indicating that there are more similarities between GLXII and GLXIII in cotton evolution. The transcriptome data analysis and quantitative real-time PCR analysis (qRT-PCR) show that some members of GLX family would respond to high temperature treatment in G.hirsutum. The protein interaction network of GLXs in G.hirsutum implied that most members can participate in various life processes through protein interactions. The results elucidated the evolutionary history of GLX family genes in plants and lay the foundation for their functions analysis in cotton.