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Upstream ORF affects MYCN translation depending on exon 1b alternative splicing

The MYCN gene is transcribed into two major mRNAs: one full-length (MYCN) and one exon 1b-spliced (MYCNDelta1b) mRNA. But nothing is known about their respective ability to translate the MYCN protein. Plasmids were prepared to enable translation from the upstream (uORF) and major ORF of the two MYCN...

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Published in:BMC cancer 2009-12, Vol.9 (1), p.445-445, Article 445
Main Authors: Besançon, Roger, Valsesia-Wittmann, Sandrine, Locher, Clara, Delloye-Bourgeois, Céline, Furhman, Lydie, Tutrone, Giovani, Bertrand, Christophe, Jallas, Anne-Catherine, Garin, Elisabeth, Puisieux, Alain
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cited_by cdi_FETCH-LOGICAL-b783t-a6a5c351562f24ae058044b09c2a3d5c4cb0ee0766a3545038850d1dca1eb6b43
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creator Besançon, Roger
Valsesia-Wittmann, Sandrine
Locher, Clara
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Furhman, Lydie
Tutrone, Giovani
Bertrand, Christophe
Jallas, Anne-Catherine
Garin, Elisabeth
Puisieux, Alain
description The MYCN gene is transcribed into two major mRNAs: one full-length (MYCN) and one exon 1b-spliced (MYCNDelta1b) mRNA. But nothing is known about their respective ability to translate the MYCN protein. Plasmids were prepared to enable translation from the upstream (uORF) and major ORF of the two MYCN transcripts. Translation was studied after transfection in neuroblastoma SH-EP cell line. Impact of the upstream AUG on translation was evaluated after directed mutagenesis. Functional study with the two MYCN mRNAs was conducted by a cell viability assay. Existence of a new protein encoded by the MYCNDelta1b uORF was explored by designing a rabbit polyclonal antibody against a specific epitope of this protein. Both are translated, but higher levels of protein were seen with MYCNDelta1b mRNA. An upstream ORF was shown to have positive cis-regulatory activity on translation from MYCN but not from MYCNDelta1b mRNA. In transfected SH-EP neuroblastoma cells, high MYCN dosage obtained with MYCNDelta1b mRNA translation induces an antiapoptotic effect after serum deprivation that was not observed with low MYCN expression obtained with MYCN mRNA. Here, we showed that MYCNOT: MYCN Overlap Transcript, a new protein of unknown function is translated from the upstream AUG of MYCNDelta1b mRNA. Existence of upstream ORF in MYCN transcripts leads to a new level of MYCN regulation. The resulting MYCN dosage has a weak but significant anti-apoptotic activity after intrinsic apoptosis induction.
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In transfected SH-EP neuroblastoma cells, high MYCN dosage obtained with MYCNDelta1b mRNA translation induces an antiapoptotic effect after serum deprivation that was not observed with low MYCN expression obtained with MYCN mRNA. Here, we showed that MYCNOT: MYCN Overlap Transcript, a new protein of unknown function is translated from the upstream AUG of MYCNDelta1b mRNA. Existence of upstream ORF in MYCN transcripts leads to a new level of MYCN regulation. 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This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><rights>Copyright ©2009 Besançon et al; licensee BioMed Central Ltd. 2009 Besançon et al; licensee BioMed Central Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b783t-a6a5c351562f24ae058044b09c2a3d5c4cb0ee0766a3545038850d1dca1eb6b43</citedby><cites>FETCH-LOGICAL-b783t-a6a5c351562f24ae058044b09c2a3d5c4cb0ee0766a3545038850d1dca1eb6b43</cites><orcidid>0000-0002-7162-0034 ; 0000-0002-9938-3798</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC2810302/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/918032549?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25732,27903,27904,36991,36992,44569,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20017904$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://inserm.hal.science/inserm-00663547$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Besançon, Roger</creatorcontrib><creatorcontrib>Valsesia-Wittmann, Sandrine</creatorcontrib><creatorcontrib>Locher, Clara</creatorcontrib><creatorcontrib>Delloye-Bourgeois, Céline</creatorcontrib><creatorcontrib>Furhman, Lydie</creatorcontrib><creatorcontrib>Tutrone, Giovani</creatorcontrib><creatorcontrib>Bertrand, Christophe</creatorcontrib><creatorcontrib>Jallas, Anne-Catherine</creatorcontrib><creatorcontrib>Garin, Elisabeth</creatorcontrib><creatorcontrib>Puisieux, Alain</creatorcontrib><title>Upstream ORF affects MYCN translation depending on exon 1b alternative splicing</title><title>BMC cancer</title><addtitle>BMC Cancer</addtitle><description>The MYCN gene is transcribed into two major mRNAs: one full-length (MYCN) and one exon 1b-spliced (MYCNDelta1b) mRNA. 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Valsesia-Wittmann, Sandrine ; Locher, Clara ; Delloye-Bourgeois, Céline ; Furhman, Lydie ; Tutrone, Giovani ; Bertrand, Christophe ; Jallas, Anne-Catherine ; Garin, Elisabeth ; Puisieux, Alain</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b783t-a6a5c351562f24ae058044b09c2a3d5c4cb0ee0766a3545038850d1dca1eb6b43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2009</creationdate><topic>Adult</topic><topic>Alternative Splicing</topic><topic>Alternative Splicing - genetics</topic><topic>Apoptosis</topic><topic>Base Sequence</topic><topic>Cancer</topic><topic>Cell Survival</topic><topic>Cell Survival - genetics</topic><topic>Cells, Cultured</topic><topic>Embryos</topic><topic>Exon (Molecular genetics)</topic><topic>Exons</topic><topic>Exons - genetics</topic><topic>Experiments</topic><topic>Fetus</topic><topic>Fetus - metabolism</topic><topic>Gene Dosage</topic><topic>Gene Dosage - physiology</topic><topic>Gene Expression</topic><topic>Gene Expression - physiology</topic><topic>Genes</topic><topic>Genetic translation</topic><topic>Humans</topic><topic>Life Sciences</topic><topic>N-Myc Proto-Oncogene Protein</topic><topic>Nuclear Proteins</topic><topic>Nuclear Proteins - genetics</topic><topic>Nuclear Proteins - metabolism</topic><topic>Oncogene Proteins</topic><topic>Oncogene Proteins - genetics</topic><topic>Oncogene Proteins - metabolism</topic><topic>Open Reading Frames</topic><topic>Open Reading Frames - genetics</topic><topic>Open Reading Frames - physiology</topic><topic>Physiological aspects</topic><topic>Plasmids</topic><topic>Protein Biosynthesis</topic><topic>Protein Isoforms</topic><topic>Protein Isoforms - genetics</topic><topic>Proteins</topic><topic>RNA Splice Sites</topic><topic>RNA Splice Sites - genetics</topic><topic>RNA, Messenger</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Besançon, Roger</creatorcontrib><creatorcontrib>Valsesia-Wittmann, Sandrine</creatorcontrib><creatorcontrib>Locher, Clara</creatorcontrib><creatorcontrib>Delloye-Bourgeois, Céline</creatorcontrib><creatorcontrib>Furhman, Lydie</creatorcontrib><creatorcontrib>Tutrone, Giovani</creatorcontrib><creatorcontrib>Bertrand, Christophe</creatorcontrib><creatorcontrib>Jallas, Anne-Catherine</creatorcontrib><creatorcontrib>Garin, Elisabeth</creatorcontrib><creatorcontrib>Puisieux, Alain</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>ProQuest Health &amp; 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But nothing is known about their respective ability to translate the MYCN protein. Plasmids were prepared to enable translation from the upstream (uORF) and major ORF of the two MYCN transcripts. Translation was studied after transfection in neuroblastoma SH-EP cell line. Impact of the upstream AUG on translation was evaluated after directed mutagenesis. Functional study with the two MYCN mRNAs was conducted by a cell viability assay. Existence of a new protein encoded by the MYCNDelta1b uORF was explored by designing a rabbit polyclonal antibody against a specific epitope of this protein. Both are translated, but higher levels of protein were seen with MYCNDelta1b mRNA. An upstream ORF was shown to have positive cis-regulatory activity on translation from MYCN but not from MYCNDelta1b mRNA. In transfected SH-EP neuroblastoma cells, high MYCN dosage obtained with MYCNDelta1b mRNA translation induces an antiapoptotic effect after serum deprivation that was not observed with low MYCN expression obtained with MYCN mRNA. Here, we showed that MYCNOT: MYCN Overlap Transcript, a new protein of unknown function is translated from the upstream AUG of MYCNDelta1b mRNA. Existence of upstream ORF in MYCN transcripts leads to a new level of MYCN regulation. The resulting MYCN dosage has a weak but significant anti-apoptotic activity after intrinsic apoptosis induction.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>20017904</pmid><doi>10.1186/1471-2407-9-445</doi><orcidid>https://orcid.org/0000-0002-7162-0034</orcidid><orcidid>https://orcid.org/0000-0002-9938-3798</orcidid><oa>free_for_read</oa></addata></record>
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subjects Adult
Alternative Splicing
Alternative Splicing - genetics
Apoptosis
Base Sequence
Cancer
Cell Survival
Cell Survival - genetics
Cells, Cultured
Embryos
Exon (Molecular genetics)
Exons
Exons - genetics
Experiments
Fetus
Fetus - metabolism
Gene Dosage
Gene Dosage - physiology
Gene Expression
Gene Expression - physiology
Genes
Genetic translation
Humans
Life Sciences
N-Myc Proto-Oncogene Protein
Nuclear Proteins
Nuclear Proteins - genetics
Nuclear Proteins - metabolism
Oncogene Proteins
Oncogene Proteins - genetics
Oncogene Proteins - metabolism
Open Reading Frames
Open Reading Frames - genetics
Open Reading Frames - physiology
Physiological aspects
Plasmids
Protein Biosynthesis
Protein Isoforms
Protein Isoforms - genetics
Proteins
RNA Splice Sites
RNA Splice Sites - genetics
RNA, Messenger
RNA, Messenger - genetics
RNA, Messenger - metabolism
title Upstream ORF affects MYCN translation depending on exon 1b alternative splicing
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