Loading…

An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis

Trichomes are specialized epidermal cells located on aerial parts of plants and are associated with a wide array of biological processes. Trichomes protect plants from adverse conditions including UV light and herbivore attack and are also an important source of a number of phytochemicals. The simpl...

Full description

Saved in:
Bibliographic Details
Published in:Frontiers in plant science 2014-06, Vol.5, p.259-259
Main Authors: Pattanaik, Sitakanta, Patra, Barunava, Singh, Sanjay Kumar, Yuan, Ling
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c4679-c69ce3efe8e3c09145abe1a193186b9bd386f1d8391f7a31f579d16cc027b0d13
cites cdi_FETCH-LOGICAL-c4679-c69ce3efe8e3c09145abe1a193186b9bd386f1d8391f7a31f579d16cc027b0d13
container_end_page 259
container_issue
container_start_page 259
container_title Frontiers in plant science
container_volume 5
creator Pattanaik, Sitakanta
Patra, Barunava
Singh, Sanjay Kumar
Yuan, Ling
description Trichomes are specialized epidermal cells located on aerial parts of plants and are associated with a wide array of biological processes. Trichomes protect plants from adverse conditions including UV light and herbivore attack and are also an important source of a number of phytochemicals. The simple unicellular trichomes of Arabidopsis serve as an excellent model to study molecular mechanism of cell differentiation and pattern formation in plants. The emerging picture suggests that the developmental process is controlled by a transcriptional network involving three major groups of transcription factors (TFs): the R2R3 MYB, basic helix-loop-helix (bHLH), and WD40 repeat (WDR) protein. These regulatory proteins form a trimeric activator complex that positively regulates trichome development. The single repeat R3 MYBs act as negative regulators of trichome development. They compete with the R2R3 MYBs to bind the bHLH factor and form a repressor complex. In addition to activator-repressor mechanism, a depletion mechanism may operate in parallel during trichome development. In this mechanism, the bHLH factor traps the WDR protein which results in depletion of WDR protein in neighboring cells. Consequently, the cells with high levels of bHLH and WDR proteins are developed into trichomes. A group of C2H2 zinc finger TFs has also been implicated in trichome development. Phytohormones, including gibberellins and jasmonic acid, play significant roles in this developmental process. Recently, microRNAs have been shown to be involved in trichome development. Furthermore, it has been demonstrated that the activities of the key regulatory proteins involved in trichome development are controlled by the 26S/ubiquitin proteasome system (UPS), highlighting the complexity of the regulatory network controlling this developmental process. To complement several excellent recent relevant reviews, this review focuses on the transcriptional network and hormonal interplay controlling trichome development in Arabidopsis.
doi_str_mv 10.3389/fpls.2014.00259
format article
fullrecord <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_1634d36183054e26ace8daf7598ab004</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_1634d36183054e26ace8daf7598ab004</doaj_id><sourcerecordid>1545189859</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4679-c69ce3efe8e3c09145abe1a193186b9bd386f1d8391f7a31f579d16cc027b0d13</originalsourceid><addsrcrecordid>eNpVkk1rGzEQhpfS0oQ0596K6KmH2pFWHytdCib0IxDIpYXehFaatZVopa0kO-Tfd20nIdFlhOadZzTD2zQfCV5SKtXFMIWybDFhS4xbrt40p0QItmCi_fv2xf2kOS_lFs-HY6xU9745aTkmsuPitLlbRZR2kHce7lEaUN0AWkMElGG9Daam_IAi1PuU75BNseYUgo9rVLO3mzQCcrCDkKYRYkU-HurH5CCgKZhYv6JVNr13aSq-fGjeDSYUOH-MZ82fH99_X_5aXN_8vLpcXS8sE51aWKEsUBhAArVYEcZND8QQRYkUveodlWIgTlJFhs5QMvBOOSKsxW3XY0foWXN15LpkbvWU_Wjyg07G68NDymttcvU2gCaCMkcFkRRzBq0wFqQzQ8eVND3GbGZ9O7KmbT-Cs_OY2YRX0NeZ6Dd6nXaa4Y5Isgd8PgJSqV4X6yvYzbzJCLbO7VvZcjGLvjx2yenfFkrVoy8WwrxCSNuiCWecSCW5mqUXR6nNqZQMw_NfCNZ7W-i9LfTeFvpgi7ni08sRnvVPJqD_AQ5YtYU</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1545189859</pqid></control><display><type>article</type><title>An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis</title><source>PubMed Central(OA)</source><creator>Pattanaik, Sitakanta ; Patra, Barunava ; Singh, Sanjay Kumar ; Yuan, Ling</creator><creatorcontrib>Pattanaik, Sitakanta ; Patra, Barunava ; Singh, Sanjay Kumar ; Yuan, Ling ; Univ. of California, Oakland, CA (United States)</creatorcontrib><description>Trichomes are specialized epidermal cells located on aerial parts of plants and are associated with a wide array of biological processes. Trichomes protect plants from adverse conditions including UV light and herbivore attack and are also an important source of a number of phytochemicals. The simple unicellular trichomes of Arabidopsis serve as an excellent model to study molecular mechanism of cell differentiation and pattern formation in plants. The emerging picture suggests that the developmental process is controlled by a transcriptional network involving three major groups of transcription factors (TFs): the R2R3 MYB, basic helix-loop-helix (bHLH), and WD40 repeat (WDR) protein. These regulatory proteins form a trimeric activator complex that positively regulates trichome development. The single repeat R3 MYBs act as negative regulators of trichome development. They compete with the R2R3 MYBs to bind the bHLH factor and form a repressor complex. In addition to activator-repressor mechanism, a depletion mechanism may operate in parallel during trichome development. In this mechanism, the bHLH factor traps the WDR protein which results in depletion of WDR protein in neighboring cells. Consequently, the cells with high levels of bHLH and WDR proteins are developed into trichomes. A group of C2H2 zinc finger TFs has also been implicated in trichome development. Phytohormones, including gibberellins and jasmonic acid, play significant roles in this developmental process. Recently, microRNAs have been shown to be involved in trichome development. Furthermore, it has been demonstrated that the activities of the key regulatory proteins involved in trichome development are controlled by the 26S/ubiquitin proteasome system (UPS), highlighting the complexity of the regulatory network controlling this developmental process. To complement several excellent recent relevant reviews, this review focuses on the transcriptional network and hormonal interplay controlling trichome development in Arabidopsis.</description><identifier>ISSN: 1664-462X</identifier><identifier>EISSN: 1664-462X</identifier><identifier>DOI: 10.3389/fpls.2014.00259</identifier><identifier>PMID: 25018756</identifier><language>eng</language><publisher>Switzerland: Frontiers Research Foundation</publisher><subject>BASIC BIOLOGICAL SCIENCES ; gene regulation ; microRNA ; Plant Science ; Plant Sciences ; posttranslational modification ; Transcription Factors ; Trichome ; ubiquitin/26S proteasome</subject><ispartof>Frontiers in plant science, 2014-06, Vol.5, p.259-259</ispartof><rights>Copyright © 2014 Pattanaik, Patra, Singh and Yuan. 2014</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4679-c69ce3efe8e3c09145abe1a193186b9bd386f1d8391f7a31f579d16cc027b0d13</citedby><cites>FETCH-LOGICAL-c4679-c69ce3efe8e3c09145abe1a193186b9bd386f1d8391f7a31f579d16cc027b0d13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4071814/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4071814/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25018756$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://www.osti.gov/servlets/purl/1628256$$D View this record in Osti.gov$$Hfree_for_read</backlink></links><search><creatorcontrib>Pattanaik, Sitakanta</creatorcontrib><creatorcontrib>Patra, Barunava</creatorcontrib><creatorcontrib>Singh, Sanjay Kumar</creatorcontrib><creatorcontrib>Yuan, Ling</creatorcontrib><creatorcontrib>Univ. of California, Oakland, CA (United States)</creatorcontrib><title>An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis</title><title>Frontiers in plant science</title><addtitle>Front Plant Sci</addtitle><description>Trichomes are specialized epidermal cells located on aerial parts of plants and are associated with a wide array of biological processes. Trichomes protect plants from adverse conditions including UV light and herbivore attack and are also an important source of a number of phytochemicals. The simple unicellular trichomes of Arabidopsis serve as an excellent model to study molecular mechanism of cell differentiation and pattern formation in plants. The emerging picture suggests that the developmental process is controlled by a transcriptional network involving three major groups of transcription factors (TFs): the R2R3 MYB, basic helix-loop-helix (bHLH), and WD40 repeat (WDR) protein. These regulatory proteins form a trimeric activator complex that positively regulates trichome development. The single repeat R3 MYBs act as negative regulators of trichome development. They compete with the R2R3 MYBs to bind the bHLH factor and form a repressor complex. In addition to activator-repressor mechanism, a depletion mechanism may operate in parallel during trichome development. In this mechanism, the bHLH factor traps the WDR protein which results in depletion of WDR protein in neighboring cells. Consequently, the cells with high levels of bHLH and WDR proteins are developed into trichomes. A group of C2H2 zinc finger TFs has also been implicated in trichome development. Phytohormones, including gibberellins and jasmonic acid, play significant roles in this developmental process. Recently, microRNAs have been shown to be involved in trichome development. Furthermore, it has been demonstrated that the activities of the key regulatory proteins involved in trichome development are controlled by the 26S/ubiquitin proteasome system (UPS), highlighting the complexity of the regulatory network controlling this developmental process. To complement several excellent recent relevant reviews, this review focuses on the transcriptional network and hormonal interplay controlling trichome development in Arabidopsis.</description><subject>BASIC BIOLOGICAL SCIENCES</subject><subject>gene regulation</subject><subject>microRNA</subject><subject>Plant Science</subject><subject>Plant Sciences</subject><subject>posttranslational modification</subject><subject>Transcription Factors</subject><subject>Trichome</subject><subject>ubiquitin/26S proteasome</subject><issn>1664-462X</issn><issn>1664-462X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkk1rGzEQhpfS0oQ0596K6KmH2pFWHytdCib0IxDIpYXehFaatZVopa0kO-Tfd20nIdFlhOadZzTD2zQfCV5SKtXFMIWybDFhS4xbrt40p0QItmCi_fv2xf2kOS_lFs-HY6xU9745aTkmsuPitLlbRZR2kHce7lEaUN0AWkMElGG9Daam_IAi1PuU75BNseYUgo9rVLO3mzQCcrCDkKYRYkU-HurH5CCgKZhYv6JVNr13aSq-fGjeDSYUOH-MZ82fH99_X_5aXN_8vLpcXS8sE51aWKEsUBhAArVYEcZND8QQRYkUveodlWIgTlJFhs5QMvBOOSKsxW3XY0foWXN15LpkbvWU_Wjyg07G68NDymttcvU2gCaCMkcFkRRzBq0wFqQzQ8eVND3GbGZ9O7KmbT-Cs_OY2YRX0NeZ6Dd6nXaa4Y5Isgd8PgJSqV4X6yvYzbzJCLbO7VvZcjGLvjx2yenfFkrVoy8WwrxCSNuiCWecSCW5mqUXR6nNqZQMw_NfCNZ7W-i9LfTeFvpgi7ni08sRnvVPJqD_AQ5YtYU</recordid><startdate>20140605</startdate><enddate>20140605</enddate><creator>Pattanaik, Sitakanta</creator><creator>Patra, Barunava</creator><creator>Singh, Sanjay Kumar</creator><creator>Yuan, Ling</creator><general>Frontiers Research Foundation</general><general>Frontiers Media S.A</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>OIOZB</scope><scope>OTOTI</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20140605</creationdate><title>An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis</title><author>Pattanaik, Sitakanta ; Patra, Barunava ; Singh, Sanjay Kumar ; Yuan, Ling</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4679-c69ce3efe8e3c09145abe1a193186b9bd386f1d8391f7a31f579d16cc027b0d13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>BASIC BIOLOGICAL SCIENCES</topic><topic>gene regulation</topic><topic>microRNA</topic><topic>Plant Science</topic><topic>Plant Sciences</topic><topic>posttranslational modification</topic><topic>Transcription Factors</topic><topic>Trichome</topic><topic>ubiquitin/26S proteasome</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pattanaik, Sitakanta</creatorcontrib><creatorcontrib>Patra, Barunava</creatorcontrib><creatorcontrib>Singh, Sanjay Kumar</creatorcontrib><creatorcontrib>Yuan, Ling</creatorcontrib><creatorcontrib>Univ. of California, Oakland, CA (United States)</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>OSTI.GOV - Hybrid</collection><collection>OSTI.GOV</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in plant science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Pattanaik, Sitakanta</au><au>Patra, Barunava</au><au>Singh, Sanjay Kumar</au><au>Yuan, Ling</au><aucorp>Univ. of California, Oakland, CA (United States)</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis</atitle><jtitle>Frontiers in plant science</jtitle><addtitle>Front Plant Sci</addtitle><date>2014-06-05</date><risdate>2014</risdate><volume>5</volume><spage>259</spage><epage>259</epage><pages>259-259</pages><issn>1664-462X</issn><eissn>1664-462X</eissn><abstract>Trichomes are specialized epidermal cells located on aerial parts of plants and are associated with a wide array of biological processes. Trichomes protect plants from adverse conditions including UV light and herbivore attack and are also an important source of a number of phytochemicals. The simple unicellular trichomes of Arabidopsis serve as an excellent model to study molecular mechanism of cell differentiation and pattern formation in plants. The emerging picture suggests that the developmental process is controlled by a transcriptional network involving three major groups of transcription factors (TFs): the R2R3 MYB, basic helix-loop-helix (bHLH), and WD40 repeat (WDR) protein. These regulatory proteins form a trimeric activator complex that positively regulates trichome development. The single repeat R3 MYBs act as negative regulators of trichome development. They compete with the R2R3 MYBs to bind the bHLH factor and form a repressor complex. In addition to activator-repressor mechanism, a depletion mechanism may operate in parallel during trichome development. In this mechanism, the bHLH factor traps the WDR protein which results in depletion of WDR protein in neighboring cells. Consequently, the cells with high levels of bHLH and WDR proteins are developed into trichomes. A group of C2H2 zinc finger TFs has also been implicated in trichome development. Phytohormones, including gibberellins and jasmonic acid, play significant roles in this developmental process. Recently, microRNAs have been shown to be involved in trichome development. Furthermore, it has been demonstrated that the activities of the key regulatory proteins involved in trichome development are controlled by the 26S/ubiquitin proteasome system (UPS), highlighting the complexity of the regulatory network controlling this developmental process. To complement several excellent recent relevant reviews, this review focuses on the transcriptional network and hormonal interplay controlling trichome development in Arabidopsis.</abstract><cop>Switzerland</cop><pub>Frontiers Research Foundation</pub><pmid>25018756</pmid><doi>10.3389/fpls.2014.00259</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1664-462X
ispartof Frontiers in plant science, 2014-06, Vol.5, p.259-259
issn 1664-462X
1664-462X
language eng
recordid cdi_doaj_primary_oai_doaj_org_article_1634d36183054e26ace8daf7598ab004
source PubMed Central(OA)
subjects BASIC BIOLOGICAL SCIENCES
gene regulation
microRNA
Plant Science
Plant Sciences
posttranslational modification
Transcription Factors
Trichome
ubiquitin/26S proteasome
title An overview of the gene regulatory network controlling trichome development in the model plant, Arabidopsis
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-29T09%3A59%3A38IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=An%20overview%20of%20the%20gene%20regulatory%20network%20controlling%20trichome%20development%20in%20the%20model%20plant,%20Arabidopsis&rft.jtitle=Frontiers%20in%20plant%20science&rft.au=Pattanaik,%20Sitakanta&rft.aucorp=Univ.%20of%20California,%20Oakland,%20CA%20(United%20States)&rft.date=2014-06-05&rft.volume=5&rft.spage=259&rft.epage=259&rft.pages=259-259&rft.issn=1664-462X&rft.eissn=1664-462X&rft_id=info:doi/10.3389/fpls.2014.00259&rft_dat=%3Cproquest_doaj_%3E1545189859%3C/proquest_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c4679-c69ce3efe8e3c09145abe1a193186b9bd386f1d8391f7a31f579d16cc027b0d13%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=1545189859&rft_id=info:pmid/25018756&rfr_iscdi=true