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Meibomian glands segmentation in infrared images with limited annotation
To investigate a pioneering framework for the segmentation of meibomian glands (MGs), using limited annotations to reduce the workload on ophthalmologists and enhance the efficiency of clinical diagnosis. Totally 203 infrared meibomian images from 138 patients with dry eye disease, accompanied by co...
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Published in: | International journal of ophthalmology 2024-03, Vol.17 (3), p.401-407 |
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container_title | International journal of ophthalmology |
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creator | Lin, Jia-Wen Lin, Ling-Jie Lu, Feng Lai, Tai-Chen Zou, Jing Guo, Lin-Ling Lin, Zhi-Ming Li, Li |
description | To investigate a pioneering framework for the segmentation of meibomian glands (MGs), using limited annotations to reduce the workload on ophthalmologists and enhance the efficiency of clinical diagnosis.
Totally 203 infrared meibomian images from 138 patients with dry eye disease, accompanied by corresponding annotations, were gathered for the study. A rectified scribble-supervised gland segmentation (RSSGS) model, incorporating temporal ensemble prediction, uncertainty estimation, and a transformation equivariance constraint, was introduced to address constraints imposed by limited supervision information inherent in scribble annotations. The viability and efficacy of the proposed model were assessed based on accuracy, intersection over union (IoU), and dice coefficient.
Using manual labels as the gold standard, RSSGS demonstrated outcomes with an accuracy of 93.54%, a dice coefficient of 78.02%, and an IoU of 64.18%. Notably, these performance metrics exceed the current weakly supervised state-of-the-art methods by 0.76%, 2.06%, and 2.69%, respectively. Furthermore, despite achieving a substantial 80% reduction in annotation costs, it only lags behind fully annotated methods by 0.72%, 1.51%, and 2.04%.
An innovative automatic segmentation model is developed for MGs in infrared eyelid images, using scribble annotation for training. This model maintains an exceptionally high level of segmentation accuracy while substantially reducing training costs. It holds substantial utility for calculating clinical parameters, thereby greatly enhancing the diagnostic efficiency of ophthalmologists in evaluating meibomian gland dysfunction. |
doi_str_mv | 10.18240/ijo.2024.03.01 |
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Totally 203 infrared meibomian images from 138 patients with dry eye disease, accompanied by corresponding annotations, were gathered for the study. A rectified scribble-supervised gland segmentation (RSSGS) model, incorporating temporal ensemble prediction, uncertainty estimation, and a transformation equivariance constraint, was introduced to address constraints imposed by limited supervision information inherent in scribble annotations. The viability and efficacy of the proposed model were assessed based on accuracy, intersection over union (IoU), and dice coefficient.
Using manual labels as the gold standard, RSSGS demonstrated outcomes with an accuracy of 93.54%, a dice coefficient of 78.02%, and an IoU of 64.18%. Notably, these performance metrics exceed the current weakly supervised state-of-the-art methods by 0.76%, 2.06%, and 2.69%, respectively. Furthermore, despite achieving a substantial 80% reduction in annotation costs, it only lags behind fully annotated methods by 0.72%, 1.51%, and 2.04%.
An innovative automatic segmentation model is developed for MGs in infrared eyelid images, using scribble annotation for training. This model maintains an exceptionally high level of segmentation accuracy while substantially reducing training costs. It holds substantial utility for calculating clinical parameters, thereby greatly enhancing the diagnostic efficiency of ophthalmologists in evaluating meibomian gland dysfunction.</description><identifier>ISSN: 2222-3959</identifier><identifier>EISSN: 2227-4898</identifier><identifier>DOI: 10.18240/ijo.2024.03.01</identifier><identifier>PMID: 38721512</identifier><language>eng</language><publisher>China: International Journal of Ophthalmology Press</publisher><subject>infrared meibomian glands images ; Intelligent Ophthalmology ; meibomian gland dysfunction ; meibomian glands segmentation ; scribbled annotation ; weak supervision</subject><ispartof>International journal of ophthalmology, 2024-03, Vol.17 (3), p.401-407</ispartof><rights>International Journal of Ophthalmology Press.</rights><rights>International Journal of Ophthalmology Press 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11074176/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11074176/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,725,778,782,883,27907,27908,53774,53776</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38721512$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lin, Jia-Wen</creatorcontrib><creatorcontrib>Lin, Ling-Jie</creatorcontrib><creatorcontrib>Lu, Feng</creatorcontrib><creatorcontrib>Lai, Tai-Chen</creatorcontrib><creatorcontrib>Zou, Jing</creatorcontrib><creatorcontrib>Guo, Lin-Ling</creatorcontrib><creatorcontrib>Lin, Zhi-Ming</creatorcontrib><creatorcontrib>Li, Li</creatorcontrib><creatorcontrib>Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, Fujian Province, China; Department of Ophthalmology, Fujian Provincial Hospital South Branch, Fujian Provincial Hospital, Fuzhou 350001, Fujian Province, China</creatorcontrib><creatorcontrib>College of Computer and Data Science, Fuzhou University, Fuzhou 350108, Fujian Province, China; Fujian Provincial Key Laboratory of Networking Computing and Intelligent Information Processing, Fuzhou University, Fuzhou 350108, Fujian Province, China</creatorcontrib><creatorcontrib>Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, Fujian Province, China</creatorcontrib><title>Meibomian glands segmentation in infrared images with limited annotation</title><title>International journal of ophthalmology</title><addtitle>Int J Ophthalmol</addtitle><description>To investigate a pioneering framework for the segmentation of meibomian glands (MGs), using limited annotations to reduce the workload on ophthalmologists and enhance the efficiency of clinical diagnosis.
Totally 203 infrared meibomian images from 138 patients with dry eye disease, accompanied by corresponding annotations, were gathered for the study. A rectified scribble-supervised gland segmentation (RSSGS) model, incorporating temporal ensemble prediction, uncertainty estimation, and a transformation equivariance constraint, was introduced to address constraints imposed by limited supervision information inherent in scribble annotations. The viability and efficacy of the proposed model were assessed based on accuracy, intersection over union (IoU), and dice coefficient.
Using manual labels as the gold standard, RSSGS demonstrated outcomes with an accuracy of 93.54%, a dice coefficient of 78.02%, and an IoU of 64.18%. Notably, these performance metrics exceed the current weakly supervised state-of-the-art methods by 0.76%, 2.06%, and 2.69%, respectively. Furthermore, despite achieving a substantial 80% reduction in annotation costs, it only lags behind fully annotated methods by 0.72%, 1.51%, and 2.04%.
An innovative automatic segmentation model is developed for MGs in infrared eyelid images, using scribble annotation for training. This model maintains an exceptionally high level of segmentation accuracy while substantially reducing training costs. It holds substantial utility for calculating clinical parameters, thereby greatly enhancing the diagnostic efficiency of ophthalmologists in evaluating meibomian gland dysfunction.</description><subject>infrared meibomian glands images</subject><subject>Intelligent Ophthalmology</subject><subject>meibomian gland dysfunction</subject><subject>meibomian glands segmentation</subject><subject>scribbled annotation</subject><subject>weak supervision</subject><issn>2222-3959</issn><issn>2227-4898</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkU1P3DAQhq2qCBBw5lbl2EsWj79zQhVqCxKIC5wtfyV4lcRgZ1v139e7CwiskWyNXz8z4xehc8ArUIThi7hOK4IJW2G6wvAFHRNCZMtUp77uzqSlHe-O0Fkpa1yX4BgwO0RHVEkCHMgxur4L0aYpmrkZRjP70pQwTGFezBLT3MRt9Nnk4Js4mSGU5m9cnpoxTnGpOTPPaS89RQe9GUs4e91P0OOvnw9X1-3t_e-bqx-3rWPAllZQC1g57GjvKBUScyqsw13gBIzgfS99sMR13kvesU45AT21veRGgXCW0RN0s-f6ZNb6Odeu8j-dTNS7RMqDNnmJbgwapGfAvZXKK8a5V4ZiYUyg1MhgJamsyz3reWOn4F0dO5vxE_TzzRyf9JD-aAAsGUhRCd9fCTm9bEJZ9BSLC2P9ypA2RdM6H1AhRFelF3upy6mUHPr3OoD1zk9d_dRbPzWmGkN98e1je-_6N_fof1p-nHs</recordid><startdate>20240318</startdate><enddate>20240318</enddate><creator>Lin, Jia-Wen</creator><creator>Lin, Ling-Jie</creator><creator>Lu, Feng</creator><creator>Lai, Tai-Chen</creator><creator>Zou, Jing</creator><creator>Guo, Lin-Ling</creator><creator>Lin, Zhi-Ming</creator><creator>Li, Li</creator><general>International Journal of Ophthalmology Press</general><general>Press of International Journal of Ophthalmology (IJO PRESS)</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20240318</creationdate><title>Meibomian glands segmentation in infrared images with limited annotation</title><author>Lin, Jia-Wen ; Lin, Ling-Jie ; Lu, Feng ; Lai, Tai-Chen ; Zou, Jing ; Guo, Lin-Ling ; Lin, Zhi-Ming ; Li, Li</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c414t-63b108c0c3fc33670536bc09e521a65ff7deb2c9dd759498c61f3bf75a816cb43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>infrared meibomian glands images</topic><topic>Intelligent Ophthalmology</topic><topic>meibomian gland dysfunction</topic><topic>meibomian glands segmentation</topic><topic>scribbled annotation</topic><topic>weak supervision</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lin, Jia-Wen</creatorcontrib><creatorcontrib>Lin, Ling-Jie</creatorcontrib><creatorcontrib>Lu, Feng</creatorcontrib><creatorcontrib>Lai, Tai-Chen</creatorcontrib><creatorcontrib>Zou, Jing</creatorcontrib><creatorcontrib>Guo, Lin-Ling</creatorcontrib><creatorcontrib>Lin, Zhi-Ming</creatorcontrib><creatorcontrib>Li, Li</creatorcontrib><creatorcontrib>Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, Fujian Province, China; Department of Ophthalmology, Fujian Provincial Hospital South Branch, Fujian Provincial Hospital, Fuzhou 350001, Fujian Province, China</creatorcontrib><creatorcontrib>College of Computer and Data Science, Fuzhou University, Fuzhou 350108, Fujian Province, China; Fujian Provincial Key Laboratory of Networking Computing and Intelligent Information Processing, Fuzhou University, Fuzhou 350108, Fujian Province, China</creatorcontrib><creatorcontrib>Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, Fujian Province, China</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Directory of Open Access Journals</collection><jtitle>International journal of ophthalmology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lin, Jia-Wen</au><au>Lin, Ling-Jie</au><au>Lu, Feng</au><au>Lai, Tai-Chen</au><au>Zou, Jing</au><au>Guo, Lin-Ling</au><au>Lin, Zhi-Ming</au><au>Li, Li</au><aucorp>Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, Fujian Province, China; Department of Ophthalmology, Fujian Provincial Hospital South Branch, Fujian Provincial Hospital, Fuzhou 350001, Fujian Province, China</aucorp><aucorp>College of Computer and Data Science, Fuzhou University, Fuzhou 350108, Fujian Province, China; Fujian Provincial Key Laboratory of Networking Computing and Intelligent Information Processing, Fuzhou University, Fuzhou 350108, Fujian Province, China</aucorp><aucorp>Shengli Clinical Medical College of Fujian Medical University, Fuzhou 350001, Fujian Province, China</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Meibomian glands segmentation in infrared images with limited annotation</atitle><jtitle>International journal of ophthalmology</jtitle><addtitle>Int J Ophthalmol</addtitle><date>2024-03-18</date><risdate>2024</risdate><volume>17</volume><issue>3</issue><spage>401</spage><epage>407</epage><pages>401-407</pages><issn>2222-3959</issn><eissn>2227-4898</eissn><abstract>To investigate a pioneering framework for the segmentation of meibomian glands (MGs), using limited annotations to reduce the workload on ophthalmologists and enhance the efficiency of clinical diagnosis.
Totally 203 infrared meibomian images from 138 patients with dry eye disease, accompanied by corresponding annotations, were gathered for the study. A rectified scribble-supervised gland segmentation (RSSGS) model, incorporating temporal ensemble prediction, uncertainty estimation, and a transformation equivariance constraint, was introduced to address constraints imposed by limited supervision information inherent in scribble annotations. The viability and efficacy of the proposed model were assessed based on accuracy, intersection over union (IoU), and dice coefficient.
Using manual labels as the gold standard, RSSGS demonstrated outcomes with an accuracy of 93.54%, a dice coefficient of 78.02%, and an IoU of 64.18%. Notably, these performance metrics exceed the current weakly supervised state-of-the-art methods by 0.76%, 2.06%, and 2.69%, respectively. Furthermore, despite achieving a substantial 80% reduction in annotation costs, it only lags behind fully annotated methods by 0.72%, 1.51%, and 2.04%.
An innovative automatic segmentation model is developed for MGs in infrared eyelid images, using scribble annotation for training. This model maintains an exceptionally high level of segmentation accuracy while substantially reducing training costs. It holds substantial utility for calculating clinical parameters, thereby greatly enhancing the diagnostic efficiency of ophthalmologists in evaluating meibomian gland dysfunction.</abstract><cop>China</cop><pub>International Journal of Ophthalmology Press</pub><pmid>38721512</pmid><doi>10.18240/ijo.2024.03.01</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | infrared meibomian glands images Intelligent Ophthalmology meibomian gland dysfunction meibomian glands segmentation scribbled annotation weak supervision |
title | Meibomian glands segmentation in infrared images with limited annotation |
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