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A Cross-Sectional Study of Compositional and Functional Profiles of Gut Microbiota in Sardinian Centenarians
Sardinia, Italy, has a high prevalence of residents who live more than 100 years. The reasons for longevity in this isolated region are currently unknown. Gut microbiota may hold a clue. To explore the role gut microbiota may play in healthy aging and longevity, we used metagenomic sequencing to det...
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description | Sardinia, Italy, has a high prevalence of residents who live more than 100 years. The reasons for longevity in this isolated region are currently unknown. Gut microbiota may hold a clue. To explore the role gut microbiota may play in healthy aging and longevity, we used metagenomic sequencing to determine the compositional and functional differences in gut microbiota associated with populations of different ages in Sardinia. Our data revealed that the gut microbiota of both young and elderly Sardinians shared similar taxonomic and functional profiles. A different pattern was found in centenarians. Within the centenarian group, the gut microbiota was correlated with the functional independence measurement of the host. Centenarians had a higher diversity of core microbiota species and microbial genes than those in the young and elderly. We found that the gut microbiota in Sardinian centenarians displayed a rearranged taxonomic pattern compared with those of the young and elderly, featured by depletion of
and
and enriched for
and
Moreover, functional analysis revealed that the microbiota in centenarians had high capacity for central metabolism, especially glycolysis and fermentation to short-chain fatty acids (SCFAs), although the gut microbiota in centenarians was low in genes encoding enzymes involved in degradation of carbohydrates, including fibers and galactose.
The gut microbiota has been proposed as a promising determinant for human health. Centenarians as a model for extreme aging may help us understand the correlation of gut microbiota with healthy aging and longevity. Here we confirmed that centenarians had microbiota elements usually associated with benefits to health. Our finding of a high capacity of glycolysis and related SCFA production represented a healthy microbiome and environment that is regarded as beneficial for host gut epithelium. The low abundance of genes encoding components of pathways involved in carbohydrate degradation was also found in the gut microbiota of Sardinian centenarians and is often associated with poor gut health. Overall, our study here represents an expansion of previous research investigating the age-related changes in gut microbiota. Furthermore, our study provides a new prospective for potential targets for gut microbiota intervention directed at limiting gut inflammation and pathology and enhancing a healthy gut barrier. |
doi_str_mv | 10.1128/msystems.00325-19 |
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and
and enriched for
and
Moreover, functional analysis revealed that the microbiota in centenarians had high capacity for central metabolism, especially glycolysis and fermentation to short-chain fatty acids (SCFAs), although the gut microbiota in centenarians was low in genes encoding enzymes involved in degradation of carbohydrates, including fibers and galactose.
The gut microbiota has been proposed as a promising determinant for human health. Centenarians as a model for extreme aging may help us understand the correlation of gut microbiota with healthy aging and longevity. Here we confirmed that centenarians had microbiota elements usually associated with benefits to health. Our finding of a high capacity of glycolysis and related SCFA production represented a healthy microbiome and environment that is regarded as beneficial for host gut epithelium. The low abundance of genes encoding components of pathways involved in carbohydrate degradation was also found in the gut microbiota of Sardinian centenarians and is often associated with poor gut health. Overall, our study here represents an expansion of previous research investigating the age-related changes in gut microbiota. Furthermore, our study provides a new prospective for potential targets for gut microbiota intervention directed at limiting gut inflammation and pathology and enhancing a healthy gut barrier.</description><identifier>ISSN: 2379-5077</identifier><identifier>EISSN: 2379-5077</identifier><identifier>DOI: 10.1128/msystems.00325-19</identifier><identifier>PMID: 31289141</identifier><language>eng</language><publisher>United States: American Society for Microbiology</publisher><subject>Age groups ; Aging ; Biodegradation ; Bioinformatics ; Carbohydrates ; centenarian ; Cross-sectional studies ; Editor's Pick ; Epithelium ; Fatty acids ; Fermentation ; Galactose ; Geriatrics ; Glycolysis ; gut microbiota ; Host-Microbe Biology ; Immunology ; Intestinal microflora ; Longevity ; Metabolism ; metagenomic sequencing ; Microbiomes ; Microbiota ; Oldest old people ; Statistical analysis ; Taxonomy ; Variance analysis</subject><ispartof>mSystems, 2019-07, Vol.4 (4)</ispartof><rights>Copyright © 2019 Wu et al.</rights><rights>Copyright © 2019 Wu et al. This work is published under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Copyright © 2019 Wu et al. 2019 Wu et al.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c559t-96c89db497ee265ad67d1312b315e1e32eab55bcd087c1aa8286a80d6ff803643</citedby><cites>FETCH-LOGICAL-c559t-96c89db497ee265ad67d1312b315e1e32eab55bcd087c1aa8286a80d6ff803643</cites><orcidid>0000-0003-0690-5006</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2267456060/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2267456060?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,3188,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31289141$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Thaiss, Christoph A.</contributor><creatorcontrib>Wu, Lu</creatorcontrib><creatorcontrib>Zeng, Tiansheng</creatorcontrib><creatorcontrib>Zinellu, Angelo</creatorcontrib><creatorcontrib>Rubino, Salvatore</creatorcontrib><creatorcontrib>Kelvin, David J</creatorcontrib><creatorcontrib>Carru, Ciriaco</creatorcontrib><title>A Cross-Sectional Study of Compositional and Functional Profiles of Gut Microbiota in Sardinian Centenarians</title><title>mSystems</title><addtitle>mSystems</addtitle><description>Sardinia, Italy, has a high prevalence of residents who live more than 100 years. The reasons for longevity in this isolated region are currently unknown. Gut microbiota may hold a clue. To explore the role gut microbiota may play in healthy aging and longevity, we used metagenomic sequencing to determine the compositional and functional differences in gut microbiota associated with populations of different ages in Sardinia. Our data revealed that the gut microbiota of both young and elderly Sardinians shared similar taxonomic and functional profiles. A different pattern was found in centenarians. Within the centenarian group, the gut microbiota was correlated with the functional independence measurement of the host. Centenarians had a higher diversity of core microbiota species and microbial genes than those in the young and elderly. We found that the gut microbiota in Sardinian centenarians displayed a rearranged taxonomic pattern compared with those of the young and elderly, featured by depletion of
and
and enriched for
and
Moreover, functional analysis revealed that the microbiota in centenarians had high capacity for central metabolism, especially glycolysis and fermentation to short-chain fatty acids (SCFAs), although the gut microbiota in centenarians was low in genes encoding enzymes involved in degradation of carbohydrates, including fibers and galactose.
The gut microbiota has been proposed as a promising determinant for human health. Centenarians as a model for extreme aging may help us understand the correlation of gut microbiota with healthy aging and longevity. Here we confirmed that centenarians had microbiota elements usually associated with benefits to health. Our finding of a high capacity of glycolysis and related SCFA production represented a healthy microbiome and environment that is regarded as beneficial for host gut epithelium. The low abundance of genes encoding components of pathways involved in carbohydrate degradation was also found in the gut microbiota of Sardinian centenarians and is often associated with poor gut health. Overall, our study here represents an expansion of previous research investigating the age-related changes in gut microbiota. Furthermore, our study provides a new prospective for potential targets for gut microbiota intervention directed at limiting gut inflammation and pathology and enhancing a healthy gut barrier.</description><subject>Age groups</subject><subject>Aging</subject><subject>Biodegradation</subject><subject>Bioinformatics</subject><subject>Carbohydrates</subject><subject>centenarian</subject><subject>Cross-sectional studies</subject><subject>Editor's Pick</subject><subject>Epithelium</subject><subject>Fatty acids</subject><subject>Fermentation</subject><subject>Galactose</subject><subject>Geriatrics</subject><subject>Glycolysis</subject><subject>gut microbiota</subject><subject>Host-Microbe Biology</subject><subject>Immunology</subject><subject>Intestinal microflora</subject><subject>Longevity</subject><subject>Metabolism</subject><subject>metagenomic sequencing</subject><subject>Microbiomes</subject><subject>Microbiota</subject><subject>Oldest old people</subject><subject>Statistical analysis</subject><subject>Taxonomy</subject><subject>Variance analysis</subject><issn>2379-5077</issn><issn>2379-5077</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkk9r3DAQxU1paUKaD9BLMfTSi1ONZMnSpRBMkwZSWtj2LPTPqRZb2kp2YL995ewmJD1pGL33Y0Z6VfUe0AUA5p-nvM-zm_IFQgTTBsSr6hSTTjQUdd3rZ_VJdZ7zFiEEjHSAxdvqhBSAgBZOq_Gy7lPMudk4M_sY1Fhv5sXu6zjUfZx2MftjWwVbXy3hUfUzxcGPLq_C62Wuv3uTovZxVrUP9UYl64NXoe5dmF1QqdT5XfVmUGN258fzrPp99fVX_625_XF901_eNoZSMTeCGS6sbkXnHGZUWdZZKCNrAtSBI9gpTak2FvHOgFIcc6Y4smwYOCKsJWfVzYFro9rKXfKTSnsZlZcPjZjupEqzN6OTwEEXixCCQYs01lC4ZMBIYUWFZoX15cDaLXpy1pR1khpfQF_eBP9H3sV7yRgwoKgAPh0BKf5dXJ7l5LNx46iCi0uWGFPaMi74Kv34n3Qbl1Ree1WxrqUMsVUFB5VZPy654WkYQHKNhpw2h2jIh2hIEMXz4fkWT47HIJB_5rC3Tg</recordid><startdate>20190709</startdate><enddate>20190709</enddate><creator>Wu, Lu</creator><creator>Zeng, Tiansheng</creator><creator>Zinellu, Angelo</creator><creator>Rubino, Salvatore</creator><creator>Kelvin, David J</creator><creator>Carru, Ciriaco</creator><general>American Society for Microbiology</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-0690-5006</orcidid></search><sort><creationdate>20190709</creationdate><title>A Cross-Sectional Study of Compositional and Functional Profiles of Gut Microbiota in Sardinian Centenarians</title><author>Wu, Lu ; Zeng, Tiansheng ; Zinellu, Angelo ; Rubino, Salvatore ; Kelvin, David J ; Carru, Ciriaco</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c559t-96c89db497ee265ad67d1312b315e1e32eab55bcd087c1aa8286a80d6ff803643</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Age groups</topic><topic>Aging</topic><topic>Biodegradation</topic><topic>Bioinformatics</topic><topic>Carbohydrates</topic><topic>centenarian</topic><topic>Cross-sectional studies</topic><topic>Editor's Pick</topic><topic>Epithelium</topic><topic>Fatty acids</topic><topic>Fermentation</topic><topic>Galactose</topic><topic>Geriatrics</topic><topic>Glycolysis</topic><topic>gut microbiota</topic><topic>Host-Microbe Biology</topic><topic>Immunology</topic><topic>Intestinal microflora</topic><topic>Longevity</topic><topic>Metabolism</topic><topic>metagenomic sequencing</topic><topic>Microbiomes</topic><topic>Microbiota</topic><topic>Oldest old people</topic><topic>Statistical analysis</topic><topic>Taxonomy</topic><topic>Variance analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wu, Lu</creatorcontrib><creatorcontrib>Zeng, Tiansheng</creatorcontrib><creatorcontrib>Zinellu, Angelo</creatorcontrib><creatorcontrib>Rubino, Salvatore</creatorcontrib><creatorcontrib>Kelvin, David J</creatorcontrib><creatorcontrib>Carru, Ciriaco</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>ProQuest Biological Science Journals</collection><collection>ProQuest - Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>mSystems</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wu, Lu</au><au>Zeng, Tiansheng</au><au>Zinellu, Angelo</au><au>Rubino, Salvatore</au><au>Kelvin, David J</au><au>Carru, Ciriaco</au><au>Thaiss, Christoph A.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A Cross-Sectional Study of Compositional and Functional Profiles of Gut Microbiota in Sardinian Centenarians</atitle><jtitle>mSystems</jtitle><addtitle>mSystems</addtitle><date>2019-07-09</date><risdate>2019</risdate><volume>4</volume><issue>4</issue><issn>2379-5077</issn><eissn>2379-5077</eissn><abstract>Sardinia, Italy, has a high prevalence of residents who live more than 100 years. The reasons for longevity in this isolated region are currently unknown. Gut microbiota may hold a clue. To explore the role gut microbiota may play in healthy aging and longevity, we used metagenomic sequencing to determine the compositional and functional differences in gut microbiota associated with populations of different ages in Sardinia. Our data revealed that the gut microbiota of both young and elderly Sardinians shared similar taxonomic and functional profiles. A different pattern was found in centenarians. Within the centenarian group, the gut microbiota was correlated with the functional independence measurement of the host. Centenarians had a higher diversity of core microbiota species and microbial genes than those in the young and elderly. We found that the gut microbiota in Sardinian centenarians displayed a rearranged taxonomic pattern compared with those of the young and elderly, featured by depletion of
and
and enriched for
and
Moreover, functional analysis revealed that the microbiota in centenarians had high capacity for central metabolism, especially glycolysis and fermentation to short-chain fatty acids (SCFAs), although the gut microbiota in centenarians was low in genes encoding enzymes involved in degradation of carbohydrates, including fibers and galactose.
The gut microbiota has been proposed as a promising determinant for human health. Centenarians as a model for extreme aging may help us understand the correlation of gut microbiota with healthy aging and longevity. Here we confirmed that centenarians had microbiota elements usually associated with benefits to health. Our finding of a high capacity of glycolysis and related SCFA production represented a healthy microbiome and environment that is regarded as beneficial for host gut epithelium. The low abundance of genes encoding components of pathways involved in carbohydrate degradation was also found in the gut microbiota of Sardinian centenarians and is often associated with poor gut health. Overall, our study here represents an expansion of previous research investigating the age-related changes in gut microbiota. Furthermore, our study provides a new prospective for potential targets for gut microbiota intervention directed at limiting gut inflammation and pathology and enhancing a healthy gut barrier.</abstract><cop>United States</cop><pub>American Society for Microbiology</pub><pmid>31289141</pmid><doi>10.1128/msystems.00325-19</doi><orcidid>https://orcid.org/0000-0003-0690-5006</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Age groups Aging Biodegradation Bioinformatics Carbohydrates centenarian Cross-sectional studies Editor's Pick Epithelium Fatty acids Fermentation Galactose Geriatrics Glycolysis gut microbiota Host-Microbe Biology Immunology Intestinal microflora Longevity Metabolism metagenomic sequencing Microbiomes Microbiota Oldest old people Statistical analysis Taxonomy Variance analysis |
title | A Cross-Sectional Study of Compositional and Functional Profiles of Gut Microbiota in Sardinian Centenarians |
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