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Association between gut microbiota and diabetic nephropathy: a mendelian randomization study

The correlation between diabetic nephropathy (DN) and gut microbiota (GM) has been suggested in numerous animal experiments and cross-sectional studies. However, a causal association between GM and DN has not been ascertained. This research adopted MR analysis to evaluate the causal link between GM...

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Published in:Frontiers in microbiology 2024-03, Vol.15, p.1309871-1309871
Main Authors: Jin, Yongxiu, Han, Chenxi, Yang, Dongliang, Gao, Shanlin
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description The correlation between diabetic nephropathy (DN) and gut microbiota (GM) has been suggested in numerous animal experiments and cross-sectional studies. However, a causal association between GM and DN has not been ascertained. This research adopted MR analysis to evaluate the causal link between GM and DN derived from data acquired through publicly available genome-wide association studies (GWAS). The study utilized the inverse variance weighted (IVW) approach to assess causal association between GM and DN. Four additional methods including MR-Egger, weighted median, weighted mode, and simple mode were employed to ensure comprehensive analysis and robust results. The Cochran's Q test and the MR-Egger method were conducted to identify heterogeneity and horizontal pleiotropy, respectively. The leave-one-out approach was utilized to evaluate the stability of MR results. Finally, a reverse MR was performed to identify the reverse causal association between GM and DN. According to IVW analysis, Class Verrucomicrobiae ( = 0.003), Order Verrucomicrobiales ( = 0.003), Family ( = 0.003), Genus ( = 0.003), Genus Catenibacterium ( = 0.031), Genus 1 ( = 0.022), Genus group ( = 0.018), and Genus ( = 0.023) were associated with a higher risk of DN. On the contrary, Class ( = 0.037), Group group ( = 0.030), Group group ( = 0.048), Order ( = 0.045), Phylum ( = 0.017) were associated with a lower risk of DN. The sensitivity analysis did not identify any substantial pleiotropy or heterogeneity in the outcomes. We found causal effects of DN on 11 GM species in the reverse MR analysis. Notably, Phylum and DN are mutually causalities. This study identified the causal association between GM and DN with MR analysis, which may enhance the understanding of the intestinal-renal axis and provide novel potential targets for early non-invasive diagnosis and treatment of DN.
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However, a causal association between GM and DN has not been ascertained. This research adopted MR analysis to evaluate the causal link between GM and DN derived from data acquired through publicly available genome-wide association studies (GWAS). The study utilized the inverse variance weighted (IVW) approach to assess causal association between GM and DN. Four additional methods including MR-Egger, weighted median, weighted mode, and simple mode were employed to ensure comprehensive analysis and robust results. The Cochran's Q test and the MR-Egger method were conducted to identify heterogeneity and horizontal pleiotropy, respectively. The leave-one-out approach was utilized to evaluate the stability of MR results. Finally, a reverse MR was performed to identify the reverse causal association between GM and DN. According to IVW analysis, Class Verrucomicrobiae ( = 0.003), Order Verrucomicrobiales ( = 0.003), Family ( = 0.003), Genus ( = 0.003), Genus Catenibacterium ( = 0.031), Genus 1 ( = 0.022), Genus group ( = 0.018), and Genus ( = 0.023) were associated with a higher risk of DN. On the contrary, Class ( = 0.037), Group group ( = 0.030), Group group ( = 0.048), Order ( = 0.045), Phylum ( = 0.017) were associated with a lower risk of DN. The sensitivity analysis did not identify any substantial pleiotropy or heterogeneity in the outcomes. We found causal effects of DN on 11 GM species in the reverse MR analysis. Notably, Phylum and DN are mutually causalities. 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However, a causal association between GM and DN has not been ascertained. This research adopted MR analysis to evaluate the causal link between GM and DN derived from data acquired through publicly available genome-wide association studies (GWAS). The study utilized the inverse variance weighted (IVW) approach to assess causal association between GM and DN. Four additional methods including MR-Egger, weighted median, weighted mode, and simple mode were employed to ensure comprehensive analysis and robust results. The Cochran's Q test and the MR-Egger method were conducted to identify heterogeneity and horizontal pleiotropy, respectively. The leave-one-out approach was utilized to evaluate the stability of MR results. Finally, a reverse MR was performed to identify the reverse causal association between GM and DN. According to IVW analysis, Class Verrucomicrobiae ( = 0.003), Order Verrucomicrobiales ( = 0.003), Family ( = 0.003), Genus ( = 0.003), Genus Catenibacterium ( = 0.031), Genus 1 ( = 0.022), Genus group ( = 0.018), and Genus ( = 0.023) were associated with a higher risk of DN. On the contrary, Class ( = 0.037), Group group ( = 0.030), Group group ( = 0.048), Order ( = 0.045), Phylum ( = 0.017) were associated with a lower risk of DN. The sensitivity analysis did not identify any substantial pleiotropy or heterogeneity in the outcomes. We found causal effects of DN on 11 GM species in the reverse MR analysis. Notably, Phylum and DN are mutually causalities. 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subjects diabetic nephropathy
gut microbiota
insulin resistance
mendelian randomization
Microbiology
short-chain fatty acids
title Association between gut microbiota and diabetic nephropathy: a mendelian randomization study
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