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Texture analysis of iodine maps and conventional images for k-nearest neighbor classification of benign and metastatic lung nodules
The purpose of this study was to analyze if the use of texture analysis on spectral detector CT (SDCT)-derived iodine maps (IM) in addition to conventional images (CI) improves lung nodule differentiation, when being applied to a k-nearest neighbor (KNN) classifier. 183 cancer patients who underwent...
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Published in: | Cancer imaging 2021-01, Vol.21 (1), p.17-17, Article 17 |
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description | The purpose of this study was to analyze if the use of texture analysis on spectral detector CT (SDCT)-derived iodine maps (IM) in addition to conventional images (CI) improves lung nodule differentiation, when being applied to a k-nearest neighbor (KNN) classifier.
183 cancer patients who underwent contrast-enhanced, venous phase SDCT of the chest were included: 85 patients with 146 benign lung nodules (BLN) confirmed by either prior/follow-up CT or histopathology and 98 patients with 425 lung metastases (LM) verified by histopathology,
F-FDG-PET-CT or unequivocal change during treatment. Semi-automatic 3D segmentation of BLN/LM was performed, and volumetric HU attenuation and iodine concentration were acquired. For conventional images and iodine maps, average, standard deviation, entropy, kurtosis, mean of the positive pixels (MPP), skewness, uniformity and uniformity of the positive pixels (UPP) within the volumes of interests were calculated. All acquired parameters were transferred to a KNN classifier.
Differentiation between BLN and LM was most accurate, when using all CI-derived features combined with the most significant IM-derived feature, entropy (Accuracy:0.87; F1/Dice:0.92). However, differentiation accuracy based on the 4 most powerful CI-derived features performed only slightly inferior (Accuracy:0.84; F1/Dice:0.89, p=0.125). Mono-parametric lung nodule differentiation based on either feature alone (i.e. attenuation or iodine concentration) was poor (AUC=0.65, 0.58, respectively).
First-order texture feature analysis of contrast-enhanced staging SDCT scans of the chest yield accurate differentiation between benign and metastatic lung nodules. In our study cohort, the most powerful iodine map-derived feature slightly, yet insignificantly increased classification accuracy compared to classification based on conventional image features only. |
doi_str_mv | 10.1186/s40644-020-00374-3 |
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183 cancer patients who underwent contrast-enhanced, venous phase SDCT of the chest were included: 85 patients with 146 benign lung nodules (BLN) confirmed by either prior/follow-up CT or histopathology and 98 patients with 425 lung metastases (LM) verified by histopathology,
F-FDG-PET-CT or unequivocal change during treatment. Semi-automatic 3D segmentation of BLN/LM was performed, and volumetric HU attenuation and iodine concentration were acquired. For conventional images and iodine maps, average, standard deviation, entropy, kurtosis, mean of the positive pixels (MPP), skewness, uniformity and uniformity of the positive pixels (UPP) within the volumes of interests were calculated. All acquired parameters were transferred to a KNN classifier.
Differentiation between BLN and LM was most accurate, when using all CI-derived features combined with the most significant IM-derived feature, entropy (Accuracy:0.87; F1/Dice:0.92). However, differentiation accuracy based on the 4 most powerful CI-derived features performed only slightly inferior (Accuracy:0.84; F1/Dice:0.89, p=0.125). Mono-parametric lung nodule differentiation based on either feature alone (i.e. attenuation or iodine concentration) was poor (AUC=0.65, 0.58, respectively).
First-order texture feature analysis of contrast-enhanced staging SDCT scans of the chest yield accurate differentiation between benign and metastatic lung nodules. In our study cohort, the most powerful iodine map-derived feature slightly, yet insignificantly increased classification accuracy compared to classification based on conventional image features only.</description><identifier>ISSN: 1470-7330</identifier><identifier>ISSN: 1740-5025</identifier><identifier>EISSN: 1470-7330</identifier><identifier>DOI: 10.1186/s40644-020-00374-3</identifier><identifier>PMID: 33499939</identifier><language>eng</language><publisher>England: BioMed Central Ltd</publisher><subject>Accuracy ; Attenuation ; Cancer therapies ; Chest ; Classification ; Classifiers ; CT imaging ; Datasets ; Detectors ; Diagnosis ; Differentiation ; Dual-energy CT ; Entropy ; Female ; Fluorodeoxyglucose F18 - therapeutic use ; Histochemistry ; Humans ; Image acquisition ; Image classification ; Image segmentation ; Iodine ; Iodine - metabolism ; K-nearest neighbors algorithm ; Kurtosis ; Lung cancer ; Lung Neoplasms - classification ; Lung Neoplasms - diagnostic imaging ; Lung nodules ; Lungs ; Male ; Medical imaging ; Metastasis ; Middle Aged ; Nodules ; PET imaging ; Pixels ; Positron Emission Tomography Computed Tomography - methods ; Spectral detector CT ; Staging ; Texture ; Tomography, X-Ray Computed - methods</subject><ispartof>Cancer imaging, 2021-01, Vol.21 (1), p.17-17, Article 17</ispartof><rights>COPYRIGHT 2021 BioMed Central Ltd.</rights><rights>2021. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>The Author(s) 2021</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c594t-b28dfa651627dad822568f468eda46b3c102b51f02e7fa64b5c2bc3c9fac71203</citedby><cites>FETCH-LOGICAL-c594t-b28dfa651627dad822568f468eda46b3c102b51f02e7fa64b5c2bc3c9fac71203</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7836145/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2491394532?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25732,27903,27904,36991,36992,44569,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33499939$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lennartz, Simon</creatorcontrib><creatorcontrib>Mager, Alina</creatorcontrib><creatorcontrib>Große Hokamp, Nils</creatorcontrib><creatorcontrib>Schäfer, Sebastian</creatorcontrib><creatorcontrib>Zopfs, David</creatorcontrib><creatorcontrib>Maintz, David</creatorcontrib><creatorcontrib>Reinhardt, Hans Christian</creatorcontrib><creatorcontrib>Thomas, Roman K</creatorcontrib><creatorcontrib>Caldeira, Liliana</creatorcontrib><creatorcontrib>Persigehl, Thorsten</creatorcontrib><title>Texture analysis of iodine maps and conventional images for k-nearest neighbor classification of benign and metastatic lung nodules</title><title>Cancer imaging</title><addtitle>Cancer Imaging</addtitle><description>The purpose of this study was to analyze if the use of texture analysis on spectral detector CT (SDCT)-derived iodine maps (IM) in addition to conventional images (CI) improves lung nodule differentiation, when being applied to a k-nearest neighbor (KNN) classifier.
183 cancer patients who underwent contrast-enhanced, venous phase SDCT of the chest were included: 85 patients with 146 benign lung nodules (BLN) confirmed by either prior/follow-up CT or histopathology and 98 patients with 425 lung metastases (LM) verified by histopathology,
F-FDG-PET-CT or unequivocal change during treatment. Semi-automatic 3D segmentation of BLN/LM was performed, and volumetric HU attenuation and iodine concentration were acquired. For conventional images and iodine maps, average, standard deviation, entropy, kurtosis, mean of the positive pixels (MPP), skewness, uniformity and uniformity of the positive pixels (UPP) within the volumes of interests were calculated. All acquired parameters were transferred to a KNN classifier.
Differentiation between BLN and LM was most accurate, when using all CI-derived features combined with the most significant IM-derived feature, entropy (Accuracy:0.87; F1/Dice:0.92). However, differentiation accuracy based on the 4 most powerful CI-derived features performed only slightly inferior (Accuracy:0.84; F1/Dice:0.89, p=0.125). Mono-parametric lung nodule differentiation based on either feature alone (i.e. attenuation or iodine concentration) was poor (AUC=0.65, 0.58, respectively).
First-order texture feature analysis of contrast-enhanced staging SDCT scans of the chest yield accurate differentiation between benign and metastatic lung nodules. In our study cohort, the most powerful iodine map-derived feature slightly, yet insignificantly increased classification accuracy compared to classification based on conventional image features only.</description><subject>Accuracy</subject><subject>Attenuation</subject><subject>Cancer therapies</subject><subject>Chest</subject><subject>Classification</subject><subject>Classifiers</subject><subject>CT imaging</subject><subject>Datasets</subject><subject>Detectors</subject><subject>Diagnosis</subject><subject>Differentiation</subject><subject>Dual-energy CT</subject><subject>Entropy</subject><subject>Female</subject><subject>Fluorodeoxyglucose F18 - therapeutic use</subject><subject>Histochemistry</subject><subject>Humans</subject><subject>Image acquisition</subject><subject>Image classification</subject><subject>Image segmentation</subject><subject>Iodine</subject><subject>Iodine - metabolism</subject><subject>K-nearest neighbors algorithm</subject><subject>Kurtosis</subject><subject>Lung cancer</subject><subject>Lung Neoplasms - classification</subject><subject>Lung Neoplasms - diagnostic imaging</subject><subject>Lung nodules</subject><subject>Lungs</subject><subject>Male</subject><subject>Medical imaging</subject><subject>Metastasis</subject><subject>Middle Aged</subject><subject>Nodules</subject><subject>PET imaging</subject><subject>Pixels</subject><subject>Positron Emission Tomography Computed Tomography - methods</subject><subject>Spectral detector CT</subject><subject>Staging</subject><subject>Texture</subject><subject>Tomography, X-Ray Computed - methods</subject><issn>1470-7330</issn><issn>1740-5025</issn><issn>1470-7330</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptkktv1DAQgCMEoqXwBzigSEiIS4pfceILUlXxqFSJSzlbjj3OevHai51U7Zk_jrNbyi5COTgaf_PZnpmqeo3ROcY9_5AZ4ow1iKAGIdqxhj6pTjHrUNNRip4e_J9UL3JeI0REL7rn1QmlTAhBxWn16wbupjlBrYLy99nlOtraReMC1Bu1zSVuah3DLYTJxcLUbqNGyLWNqf7RBFAJ8lQHcONqKCHtVc7OOq0WfJENENwYdp4NTCpPZUfXfg5jHaKZPeSX1TOrfIZXD-tZ9f3zp5vLr831ty9XlxfXjW4Fm5qB9MYq3mJOOqNMT0jLe8t4D0YxPlCNERlabBGBrnBsaDUZNNXCKt1hguhZdbX3mqjWcpvKS9K9jMrJXSCmUapULudB4uIdOLPCmI4RQkQ3iEET3nZKK7C2uD7uXdt52IDRpTxJ-SPp8U5wKznGW9n1lGPWFsH7B0GKP-dSQ7lxWYP3KkCcsySsx5z2DC3o23_QdZxT6cVCCUxF0ZG_1KjKA1ywsZyrF6m84C1iLe5bXqjz_1DlM7Bxpc9gXYkfJbw7SFiB8tMqRz8v7c3HINmDOsWcE9jHYmAkl3mV-3mVZV7lbl4lLUlvDsv4mPJnQOlvGJvm8A</recordid><startdate>20210126</startdate><enddate>20210126</enddate><creator>Lennartz, Simon</creator><creator>Mager, Alina</creator><creator>Große Hokamp, Nils</creator><creator>Schäfer, Sebastian</creator><creator>Zopfs, David</creator><creator>Maintz, David</creator><creator>Reinhardt, Hans Christian</creator><creator>Thomas, Roman K</creator><creator>Caldeira, Liliana</creator><creator>Persigehl, Thorsten</creator><general>BioMed Central Ltd</general><general>BioMed Central</general><general>BMC</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88C</scope><scope>88E</scope><scope>8FE</scope><scope>8FG</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ARAPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>M0S</scope><scope>M0T</scope><scope>M1P</scope><scope>P5Z</scope><scope>P62</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20210126</creationdate><title>Texture analysis of iodine maps and conventional images for k-nearest neighbor classification of benign and metastatic lung nodules</title><author>Lennartz, Simon ; Mager, Alina ; Große Hokamp, Nils ; Schäfer, Sebastian ; Zopfs, David ; Maintz, David ; Reinhardt, Hans Christian ; Thomas, Roman K ; Caldeira, Liliana ; Persigehl, Thorsten</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c594t-b28dfa651627dad822568f468eda46b3c102b51f02e7fa64b5c2bc3c9fac71203</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Accuracy</topic><topic>Attenuation</topic><topic>Cancer therapies</topic><topic>Chest</topic><topic>Classification</topic><topic>Classifiers</topic><topic>CT imaging</topic><topic>Datasets</topic><topic>Detectors</topic><topic>Diagnosis</topic><topic>Differentiation</topic><topic>Dual-energy CT</topic><topic>Entropy</topic><topic>Female</topic><topic>Fluorodeoxyglucose F18 - therapeutic use</topic><topic>Histochemistry</topic><topic>Humans</topic><topic>Image acquisition</topic><topic>Image classification</topic><topic>Image segmentation</topic><topic>Iodine</topic><topic>Iodine - metabolism</topic><topic>K-nearest neighbors algorithm</topic><topic>Kurtosis</topic><topic>Lung cancer</topic><topic>Lung Neoplasms - classification</topic><topic>Lung Neoplasms - diagnostic imaging</topic><topic>Lung nodules</topic><topic>Lungs</topic><topic>Male</topic><topic>Medical imaging</topic><topic>Metastasis</topic><topic>Middle Aged</topic><topic>Nodules</topic><topic>PET imaging</topic><topic>Pixels</topic><topic>Positron Emission Tomography Computed Tomography - methods</topic><topic>Spectral detector CT</topic><topic>Staging</topic><topic>Texture</topic><topic>Tomography, X-Ray Computed - methods</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lennartz, Simon</creatorcontrib><creatorcontrib>Mager, Alina</creatorcontrib><creatorcontrib>Große Hokamp, Nils</creatorcontrib><creatorcontrib>Schäfer, Sebastian</creatorcontrib><creatorcontrib>Zopfs, David</creatorcontrib><creatorcontrib>Maintz, David</creatorcontrib><creatorcontrib>Reinhardt, Hans Christian</creatorcontrib><creatorcontrib>Thomas, Roman K</creatorcontrib><creatorcontrib>Caldeira, Liliana</creatorcontrib><creatorcontrib>Persigehl, Thorsten</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Healthcare Administration Database (Alumni)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Advanced Technologies & Aerospace Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Healthcare Administration Database</collection><collection>Medical Database</collection><collection>ProQuest advanced technologies & aerospace journals</collection><collection>ProQuest Advanced Technologies & Aerospace Collection</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Cancer imaging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lennartz, Simon</au><au>Mager, Alina</au><au>Große Hokamp, Nils</au><au>Schäfer, Sebastian</au><au>Zopfs, David</au><au>Maintz, David</au><au>Reinhardt, Hans Christian</au><au>Thomas, Roman K</au><au>Caldeira, Liliana</au><au>Persigehl, Thorsten</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Texture analysis of iodine maps and conventional images for k-nearest neighbor classification of benign and metastatic lung nodules</atitle><jtitle>Cancer imaging</jtitle><addtitle>Cancer Imaging</addtitle><date>2021-01-26</date><risdate>2021</risdate><volume>21</volume><issue>1</issue><spage>17</spage><epage>17</epage><pages>17-17</pages><artnum>17</artnum><issn>1470-7330</issn><issn>1740-5025</issn><eissn>1470-7330</eissn><abstract>The purpose of this study was to analyze if the use of texture analysis on spectral detector CT (SDCT)-derived iodine maps (IM) in addition to conventional images (CI) improves lung nodule differentiation, when being applied to a k-nearest neighbor (KNN) classifier.
183 cancer patients who underwent contrast-enhanced, venous phase SDCT of the chest were included: 85 patients with 146 benign lung nodules (BLN) confirmed by either prior/follow-up CT or histopathology and 98 patients with 425 lung metastases (LM) verified by histopathology,
F-FDG-PET-CT or unequivocal change during treatment. Semi-automatic 3D segmentation of BLN/LM was performed, and volumetric HU attenuation and iodine concentration were acquired. For conventional images and iodine maps, average, standard deviation, entropy, kurtosis, mean of the positive pixels (MPP), skewness, uniformity and uniformity of the positive pixels (UPP) within the volumes of interests were calculated. All acquired parameters were transferred to a KNN classifier.
Differentiation between BLN and LM was most accurate, when using all CI-derived features combined with the most significant IM-derived feature, entropy (Accuracy:0.87; F1/Dice:0.92). However, differentiation accuracy based on the 4 most powerful CI-derived features performed only slightly inferior (Accuracy:0.84; F1/Dice:0.89, p=0.125). Mono-parametric lung nodule differentiation based on either feature alone (i.e. attenuation or iodine concentration) was poor (AUC=0.65, 0.58, respectively).
First-order texture feature analysis of contrast-enhanced staging SDCT scans of the chest yield accurate differentiation between benign and metastatic lung nodules. In our study cohort, the most powerful iodine map-derived feature slightly, yet insignificantly increased classification accuracy compared to classification based on conventional image features only.</abstract><cop>England</cop><pub>BioMed Central Ltd</pub><pmid>33499939</pmid><doi>10.1186/s40644-020-00374-3</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Accuracy Attenuation Cancer therapies Chest Classification Classifiers CT imaging Datasets Detectors Diagnosis Differentiation Dual-energy CT Entropy Female Fluorodeoxyglucose F18 - therapeutic use Histochemistry Humans Image acquisition Image classification Image segmentation Iodine Iodine - metabolism K-nearest neighbors algorithm Kurtosis Lung cancer Lung Neoplasms - classification Lung Neoplasms - diagnostic imaging Lung nodules Lungs Male Medical imaging Metastasis Middle Aged Nodules PET imaging Pixels Positron Emission Tomography Computed Tomography - methods Spectral detector CT Staging Texture Tomography, X-Ray Computed - methods |
title | Texture analysis of iodine maps and conventional images for k-nearest neighbor classification of benign and metastatic lung nodules |
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