Genetic Diversity, Population Structure, and Conservation Units of Castanopsis sclerophylla (Fagaceae)

• Published in: Forests 2022-08, Vol.13 (8), p.1239
• Main Authors: Chen, Shuang, Chen, Risheng, Zeng, Xiaorong, Chen, Xing, Qin, Xinsheng, Zhang, Zhuoxin, Sun, Ye
• Format: Article
• Language: English
• Subjects: Agricultural production; Bayesian analysis; Biodiversity; Biomarkers; Castanopsis sclerophylla; Chloroplast DNA; chloroplast DNA sequence; Chloroplasts; Climate change; Cluster analysis; Clustering; Coniferous forests; Conservation; Deoxyribonucleic acid; Divergence; DNA; Ecological niches; Gene sequencing; Genetic diversity; Genetic markers; Holocene; microsatellite; Microsatellites; Mountains; Mutation; Nucleotide sequence; Permutations; Phylogeography; Plant species; Polymorphism; Population; Population genetics; Population structure; Simulation; Variance analysis; Wildlife conservation
• ISSN: 1999-4907; 1999-4907
• DOI: 10.3390/f13081239

Castanopsis sclerophylla (Lindl.) Schott. is a canopy tree species of evergreen broad-leaved forests in subtropical China. In this study, the genetic diversity and population structure of C. sclerophylla were investigated by using chloroplast DNA sequences and nuclear microsatellite markers. Permutation tests with chloroplast DNA sequences indicated the presence of phylogeographic structure in C. sclerophylla. Based on nuclear microsatellite markers, Bayesian clustering analysis revealed eastern-to-western differentiation in C. sclerophylla, and the analysis of molecular variance suggested population divergence has arisen along the Xuefeng, Luoxiao, and Wuyi mountain ranges. The approximate Bayesian computation demonstrated that the genetic diversity pattern of C. sclerophylla could be explained by geographic isolation followed by secondary contact. Ecological niche modelling showed that distribution of C. sclerophylla shrank southward at the Last Glacial Maximum and expanded northward at the Mid Holocene. These results suggested that the uplift of the Xuefeng, Luoxiao, and Wuyi mountain ranges and the interglacial–glacial climate change shaped the genetic diversity of C. sclerophylla. The Luoxiao mountain range should be considered as a key conservation unit of C. sclerophylla due to its higher level of genetic diversity. Our study supplies important information for prioritizing the conservation and sustainable utilization of C. sclerophylla, and provides insight on the dynamics of evergreen broad-leaved forests in subtropical China.