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Application of Transcriptome Analysis to Understand the Adverse Effects of Hypotonic Stress on Different Development Stages in the Giant Freshwater Prawn Macrobrachium rosenbergii Post-Larvae
Salinity is one of the important environmental factors affecting survival and growth of aquatic animals. However, the impact of low-salinity stress on post-larvae at different development stages remains elusive. Therefore, the aim of this study was to explore the underlying mechanisms of hypotonic s...
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Published in: | Antioxidants 2022-02, Vol.11 (3), p.440 |
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description | Salinity is one of the important environmental factors affecting survival and growth of aquatic animals. However, the impact of low-salinity stress on
post-larvae at different development stages remains elusive. Therefore, the aim of this study was to explore the underlying mechanisms of hypotonic stress at different development stages of
post-larvae through transcriptome analysis and antioxidant parameters detection. The salinity of the control group was 15 psu (S15) and the hypotonic stress group was 6 psu (S6). Samples were collected at 7 days-post-hatch (dph), 14 dph and 21 dph larvae. The results showed that hypotonic stress caused oxidative damage in post-larvae evidenced by decreased glutathione peroxidase (GSH-Px); superoxide dismutase (SOD); anti-superoxide anion free radical (ASAFR); and increased malondialdehyde (MDA); nitric oxide (NO); and inducible nitric oxide synthase (iNOS) levels. Transcriptome analysis showed that there were 1428, 1187, 132 DEGs including 301, 366, 4 up-regulated genes and 1127, 821, 128 down-regulated genes at 7 dph, 14 dph and 21 dph larvae under hypotonic stress, respectively. Furthermore, GO and KEGG enrichment indicated that hypotonic stress led to dysregulation of immune signals including lysosome and autophagy in the 7 dph larvae. The autophagy-related genes including beclin 1-associated autophagy-related key regulator (
); ubiquitin-like modifier-activating enzyme ATG7 (
);
; autophagy-related protein 13 (
); nuclear receptor-binding factor 2 (
); ubiquitin-like-conjugating enzyme ATG3 (
); vacuole membrane protein 1 (
); and autophagy-related protein 2 (
) decreased at 7 dph, and 14 dph larvae, and then increased at 21 dph larvae under hypotonic stress. In the 14 dph and 21 dph larvae, the renin-angiotensin system was activated. In conclusion, our data indicated that hypotonic stress reduced the antioxidant capacity and impaired the immune system in post-larvae, but as development progresses, the adaptability of post-larvae to hypotonic stress gradually increased, and might reach a new homeostasis through the RAS signaling pathway. |
doi_str_mv | 10.3390/antiox11030440 |
format | article |
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post-larvae at different development stages remains elusive. Therefore, the aim of this study was to explore the underlying mechanisms of hypotonic stress at different development stages of
post-larvae through transcriptome analysis and antioxidant parameters detection. The salinity of the control group was 15 psu (S15) and the hypotonic stress group was 6 psu (S6). Samples were collected at 7 days-post-hatch (dph), 14 dph and 21 dph larvae. The results showed that hypotonic stress caused oxidative damage in post-larvae evidenced by decreased glutathione peroxidase (GSH-Px); superoxide dismutase (SOD); anti-superoxide anion free radical (ASAFR); and increased malondialdehyde (MDA); nitric oxide (NO); and inducible nitric oxide synthase (iNOS) levels. Transcriptome analysis showed that there were 1428, 1187, 132 DEGs including 301, 366, 4 up-regulated genes and 1127, 821, 128 down-regulated genes at 7 dph, 14 dph and 21 dph larvae under hypotonic stress, respectively. Furthermore, GO and KEGG enrichment indicated that hypotonic stress led to dysregulation of immune signals including lysosome and autophagy in the 7 dph larvae. The autophagy-related genes including beclin 1-associated autophagy-related key regulator (
); ubiquitin-like modifier-activating enzyme ATG7 (
);
; autophagy-related protein 13 (
); nuclear receptor-binding factor 2 (
); ubiquitin-like-conjugating enzyme ATG3 (
); vacuole membrane protein 1 (
); and autophagy-related protein 2 (
) decreased at 7 dph, and 14 dph larvae, and then increased at 21 dph larvae under hypotonic stress. In the 14 dph and 21 dph larvae, the renin-angiotensin system was activated. In conclusion, our data indicated that hypotonic stress reduced the antioxidant capacity and impaired the immune system in post-larvae, but as development progresses, the adaptability of post-larvae to hypotonic stress gradually increased, and might reach a new homeostasis through the RAS signaling pathway.</description><identifier>ISSN: 2076-3921</identifier><identifier>EISSN: 2076-3921</identifier><identifier>DOI: 10.3390/antiox11030440</identifier><identifier>PMID: 35326091</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Adaptability ; Angiotensin ; antioxidant capacity ; Antioxidants ; Aquatic animals ; Autophagy ; Crustaceans ; development stages ; Developmental stages ; Embryos ; Environmental factors ; Gene expression ; Glutathione peroxidase ; Homeostasis ; hypotonic stress ; Immune system ; Laboratory animals ; Larvae ; Macrobrachium rosenbergii ; Malondialdehyde ; Membrane proteins ; Nitric oxide ; Nitric-oxide synthase ; Osmotic pressure ; Physiology ; Proteins ; Renin ; Salinity ; Salinity effects ; Signal transduction ; Software ; Superoxide anions ; Superoxide dismutase ; transcriptome analysis ; Transcriptomes ; Ubiquitin ; Water quality</subject><ispartof>Antioxidants, 2022-02, Vol.11 (3), p.440</ispartof><rights>2022 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2022 by the authors. 2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c484t-cdcfe6f240f246872afd6b1bf42e37d63b82da9ff9c50b6d058ddeec6820d6d93</citedby><cites>FETCH-LOGICAL-c484t-cdcfe6f240f246872afd6b1bf42e37d63b82da9ff9c50b6d058ddeec6820d6d93</cites><orcidid>0000-0002-3848-5969 ; 0000-0002-9424-3331</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2642332619/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2642332619?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35326091$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Bo</creatorcontrib><creatorcontrib>Gao, Qiang</creatorcontrib><creatorcontrib>Song, Changyou</creatorcontrib><creatorcontrib>Sun, Cunxin</creatorcontrib><creatorcontrib>Liu, Mingyang</creatorcontrib><creatorcontrib>Liu, Xin</creatorcontrib><creatorcontrib>Liu, Yunke</creatorcontrib><creatorcontrib>Li, Zhengzhong</creatorcontrib><creatorcontrib>Zhou, Qunlan</creatorcontrib><creatorcontrib>Zhu, Hao</creatorcontrib><title>Application of Transcriptome Analysis to Understand the Adverse Effects of Hypotonic Stress on Different Development Stages in the Giant Freshwater Prawn Macrobrachium rosenbergii Post-Larvae</title><title>Antioxidants</title><addtitle>Antioxidants (Basel)</addtitle><description>Salinity is one of the important environmental factors affecting survival and growth of aquatic animals. However, the impact of low-salinity stress on
post-larvae at different development stages remains elusive. Therefore, the aim of this study was to explore the underlying mechanisms of hypotonic stress at different development stages of
post-larvae through transcriptome analysis and antioxidant parameters detection. The salinity of the control group was 15 psu (S15) and the hypotonic stress group was 6 psu (S6). Samples were collected at 7 days-post-hatch (dph), 14 dph and 21 dph larvae. The results showed that hypotonic stress caused oxidative damage in post-larvae evidenced by decreased glutathione peroxidase (GSH-Px); superoxide dismutase (SOD); anti-superoxide anion free radical (ASAFR); and increased malondialdehyde (MDA); nitric oxide (NO); and inducible nitric oxide synthase (iNOS) levels. Transcriptome analysis showed that there were 1428, 1187, 132 DEGs including 301, 366, 4 up-regulated genes and 1127, 821, 128 down-regulated genes at 7 dph, 14 dph and 21 dph larvae under hypotonic stress, respectively. Furthermore, GO and KEGG enrichment indicated that hypotonic stress led to dysregulation of immune signals including lysosome and autophagy in the 7 dph larvae. The autophagy-related genes including beclin 1-associated autophagy-related key regulator (
); ubiquitin-like modifier-activating enzyme ATG7 (
);
; autophagy-related protein 13 (
); nuclear receptor-binding factor 2 (
); ubiquitin-like-conjugating enzyme ATG3 (
); vacuole membrane protein 1 (
); and autophagy-related protein 2 (
) decreased at 7 dph, and 14 dph larvae, and then increased at 21 dph larvae under hypotonic stress. In the 14 dph and 21 dph larvae, the renin-angiotensin system was activated. In conclusion, our data indicated that hypotonic stress reduced the antioxidant capacity and impaired the immune system in post-larvae, but as development progresses, the adaptability of post-larvae to hypotonic stress gradually increased, and might reach a new homeostasis through the RAS signaling pathway.</description><subject>Adaptability</subject><subject>Angiotensin</subject><subject>antioxidant capacity</subject><subject>Antioxidants</subject><subject>Aquatic animals</subject><subject>Autophagy</subject><subject>Crustaceans</subject><subject>development stages</subject><subject>Developmental stages</subject><subject>Embryos</subject><subject>Environmental factors</subject><subject>Gene expression</subject><subject>Glutathione peroxidase</subject><subject>Homeostasis</subject><subject>hypotonic stress</subject><subject>Immune system</subject><subject>Laboratory animals</subject><subject>Larvae</subject><subject>Macrobrachium rosenbergii</subject><subject>Malondialdehyde</subject><subject>Membrane proteins</subject><subject>Nitric oxide</subject><subject>Nitric-oxide synthase</subject><subject>Osmotic pressure</subject><subject>Physiology</subject><subject>Proteins</subject><subject>Renin</subject><subject>Salinity</subject><subject>Salinity effects</subject><subject>Signal transduction</subject><subject>Software</subject><subject>Superoxide anions</subject><subject>Superoxide dismutase</subject><subject>transcriptome analysis</subject><subject>Transcriptomes</subject><subject>Ubiquitin</subject><subject>Water quality</subject><issn>2076-3921</issn><issn>2076-3921</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkk1vGyEQhldVqyZKc-2xQuqlF6d8rNndSyUr35KrRkpyRiwMNtYubIF14l_Xv1Zsp1FcJATMvPPADFMUnwk-Y6zB36VL1j8TghkuS_yuOKa44hPWUPL-zf6oOI1xhfNoCKtx87E4YlNGeT4eF39mw9BZJTPIIW_QQ5AuqmCH5HtAMye7TbQRJY8enYYQk3QapWV26XU-Aro0BlSK29ibzeCTd1ah-xQgZptDFzb7A7iELmANnR_67f4-yQVEZN0OdW1zIugqhyyfZIKA7oJ8cuinVMG3QaqlHXsUfATXQlhYi-58TJO5DGsJn4oPRnYRTl_Wk-Lx6vLh_GYy_3V9ez6bT1RZl2mitDLADS1xnryuqDSat6Q1JQVWac7ammrZGNOoKW65xtNaawDFa4o11w07KW73XO3lSgzB9jJshJdW7Aw-LIQMyaoOBGXQbLlEMZq_RdeMUgoGE4Vl1TLIrB971jC2PWiVKxJkdwA99Di7FAu_FnVTlhWfZsC3F0Dwv0eISfQ2Kug66cCPUVCe7yWYVDxLv_4nXfkx5G_dqSjLfUC22Z3tVbniMQYwr48hWGxbTRy2Wg748jaFV_m_xmJ_AXoe1as</recordid><startdate>20220222</startdate><enddate>20220222</enddate><creator>Liu, Bo</creator><creator>Gao, Qiang</creator><creator>Song, Changyou</creator><creator>Sun, Cunxin</creator><creator>Liu, Mingyang</creator><creator>Liu, Xin</creator><creator>Liu, Yunke</creator><creator>Li, Zhengzhong</creator><creator>Zhou, Qunlan</creator><creator>Zhu, Hao</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QR</scope><scope>7T5</scope><scope>7TO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-3848-5969</orcidid><orcidid>https://orcid.org/0000-0002-9424-3331</orcidid></search><sort><creationdate>20220222</creationdate><title>Application of Transcriptome Analysis to Understand the Adverse Effects of Hypotonic Stress on Different Development Stages in the Giant Freshwater Prawn Macrobrachium rosenbergii Post-Larvae</title><author>Liu, Bo ; Gao, Qiang ; Song, Changyou ; Sun, Cunxin ; Liu, Mingyang ; Liu, Xin ; Liu, Yunke ; Li, Zhengzhong ; Zhou, Qunlan ; Zhu, Hao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c484t-cdcfe6f240f246872afd6b1bf42e37d63b82da9ff9c50b6d058ddeec6820d6d93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Adaptability</topic><topic>Angiotensin</topic><topic>antioxidant capacity</topic><topic>Antioxidants</topic><topic>Aquatic animals</topic><topic>Autophagy</topic><topic>Crustaceans</topic><topic>development stages</topic><topic>Developmental stages</topic><topic>Embryos</topic><topic>Environmental factors</topic><topic>Gene expression</topic><topic>Glutathione peroxidase</topic><topic>Homeostasis</topic><topic>hypotonic stress</topic><topic>Immune system</topic><topic>Laboratory animals</topic><topic>Larvae</topic><topic>Macrobrachium rosenbergii</topic><topic>Malondialdehyde</topic><topic>Membrane proteins</topic><topic>Nitric oxide</topic><topic>Nitric-oxide synthase</topic><topic>Osmotic pressure</topic><topic>Physiology</topic><topic>Proteins</topic><topic>Renin</topic><topic>Salinity</topic><topic>Salinity effects</topic><topic>Signal transduction</topic><topic>Software</topic><topic>Superoxide anions</topic><topic>Superoxide dismutase</topic><topic>transcriptome analysis</topic><topic>Transcriptomes</topic><topic>Ubiquitin</topic><topic>Water quality</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Bo</creatorcontrib><creatorcontrib>Gao, Qiang</creatorcontrib><creatorcontrib>Song, Changyou</creatorcontrib><creatorcontrib>Sun, Cunxin</creatorcontrib><creatorcontrib>Liu, Mingyang</creatorcontrib><creatorcontrib>Liu, Xin</creatorcontrib><creatorcontrib>Liu, Yunke</creatorcontrib><creatorcontrib>Li, Zhengzhong</creatorcontrib><creatorcontrib>Zhou, Qunlan</creatorcontrib><creatorcontrib>Zhu, Hao</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Chemoreception Abstracts</collection><collection>Immunology Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Antioxidants</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Bo</au><au>Gao, Qiang</au><au>Song, Changyou</au><au>Sun, Cunxin</au><au>Liu, Mingyang</au><au>Liu, Xin</au><au>Liu, Yunke</au><au>Li, Zhengzhong</au><au>Zhou, Qunlan</au><au>Zhu, Hao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Application of Transcriptome Analysis to Understand the Adverse Effects of Hypotonic Stress on Different Development Stages in the Giant Freshwater Prawn Macrobrachium rosenbergii Post-Larvae</atitle><jtitle>Antioxidants</jtitle><addtitle>Antioxidants (Basel)</addtitle><date>2022-02-22</date><risdate>2022</risdate><volume>11</volume><issue>3</issue><spage>440</spage><pages>440-</pages><issn>2076-3921</issn><eissn>2076-3921</eissn><abstract>Salinity is one of the important environmental factors affecting survival and growth of aquatic animals. However, the impact of low-salinity stress on
post-larvae at different development stages remains elusive. Therefore, the aim of this study was to explore the underlying mechanisms of hypotonic stress at different development stages of
post-larvae through transcriptome analysis and antioxidant parameters detection. The salinity of the control group was 15 psu (S15) and the hypotonic stress group was 6 psu (S6). Samples were collected at 7 days-post-hatch (dph), 14 dph and 21 dph larvae. The results showed that hypotonic stress caused oxidative damage in post-larvae evidenced by decreased glutathione peroxidase (GSH-Px); superoxide dismutase (SOD); anti-superoxide anion free radical (ASAFR); and increased malondialdehyde (MDA); nitric oxide (NO); and inducible nitric oxide synthase (iNOS) levels. Transcriptome analysis showed that there were 1428, 1187, 132 DEGs including 301, 366, 4 up-regulated genes and 1127, 821, 128 down-regulated genes at 7 dph, 14 dph and 21 dph larvae under hypotonic stress, respectively. Furthermore, GO and KEGG enrichment indicated that hypotonic stress led to dysregulation of immune signals including lysosome and autophagy in the 7 dph larvae. The autophagy-related genes including beclin 1-associated autophagy-related key regulator (
); ubiquitin-like modifier-activating enzyme ATG7 (
);
; autophagy-related protein 13 (
); nuclear receptor-binding factor 2 (
); ubiquitin-like-conjugating enzyme ATG3 (
); vacuole membrane protein 1 (
); and autophagy-related protein 2 (
) decreased at 7 dph, and 14 dph larvae, and then increased at 21 dph larvae under hypotonic stress. In the 14 dph and 21 dph larvae, the renin-angiotensin system was activated. In conclusion, our data indicated that hypotonic stress reduced the antioxidant capacity and impaired the immune system in post-larvae, but as development progresses, the adaptability of post-larvae to hypotonic stress gradually increased, and might reach a new homeostasis through the RAS signaling pathway.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>35326091</pmid><doi>10.3390/antiox11030440</doi><orcidid>https://orcid.org/0000-0002-3848-5969</orcidid><orcidid>https://orcid.org/0000-0002-9424-3331</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Adaptability Angiotensin antioxidant capacity Antioxidants Aquatic animals Autophagy Crustaceans development stages Developmental stages Embryos Environmental factors Gene expression Glutathione peroxidase Homeostasis hypotonic stress Immune system Laboratory animals Larvae Macrobrachium rosenbergii Malondialdehyde Membrane proteins Nitric oxide Nitric-oxide synthase Osmotic pressure Physiology Proteins Renin Salinity Salinity effects Signal transduction Software Superoxide anions Superoxide dismutase transcriptome analysis Transcriptomes Ubiquitin Water quality |
title | Application of Transcriptome Analysis to Understand the Adverse Effects of Hypotonic Stress on Different Development Stages in the Giant Freshwater Prawn Macrobrachium rosenbergii Post-Larvae |
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