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Genomic Profiling for Piroplasms in Feeding Ixodid Ticks in the Eastern Cape, South Africa
Importation of tick-infected animals and the uncontrollable migration of birds and wild animals across borders can lead to geographical expansion and redistribution of ticks and pathogen vectors, thus leading to the emergence and re-emergence of tick-borne diseases in humans and animals. Comparative...
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Published in: | Pathogens (Basel) 2020-12, Vol.9 (12), p.1061 |
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description | Importation of tick-infected animals and the uncontrollable migration of birds and wild animals across borders can lead to geographical expansion and redistribution of ticks and pathogen vectors, thus leading to the emergence and re-emergence of tick-borne diseases in humans and animals. Comparatively, little is known about the occurrence of piroplasms in ixodid ticks in the Eastern Cape, South Africa, thus necessitating this study, which is aimed at detecting piroplasms (
and
) from feeding tick samples collected from cattle, sheep, and goats in selected sites in the Eastern Cape, South Africa. A total of 1200 feeding ixodid ticks collected from farm animals at selected homesteads were first subjected to molecular identification using mitochondrial 12S ribosomal RNA (rRNA) gene by PCR and were further tested for the presence of piroplasms through amplification of the 18S rRNA gene via nested-PCR followed by sequencing of the PCR products. The results indicated that 853 (71.1%) corresponded to the genus
, 335 (27.9%) corresponded to genus
, and 12 (1%) corresponded to genus
.
and
were the most common identified ticks from this study. The 18S rRNA nested-PCR revealed that 44 (3.7%) samples were confirmed positive for
. A homology search for the generated sequences revealed a high percentage identity of 98-98.9% similarity to
,
, and
in the GenBank. Based on the results obtained herein, we conclude that there is a big diversity of
species; therefore, we suggest that this research should cover more geographical areas in order to reveal the true prevalence of this pathogen in the studied area because this will be a great step in the possible prevention of an outbreak that could have devastating effects on livestock production and human health in both the studied areas and South Africa at large. |
doi_str_mv | 10.3390/pathogens9121061 |
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and
) from feeding tick samples collected from cattle, sheep, and goats in selected sites in the Eastern Cape, South Africa. A total of 1200 feeding ixodid ticks collected from farm animals at selected homesteads were first subjected to molecular identification using mitochondrial 12S ribosomal RNA (rRNA) gene by PCR and were further tested for the presence of piroplasms through amplification of the 18S rRNA gene via nested-PCR followed by sequencing of the PCR products. The results indicated that 853 (71.1%) corresponded to the genus
, 335 (27.9%) corresponded to genus
, and 12 (1%) corresponded to genus
.
and
were the most common identified ticks from this study. The 18S rRNA nested-PCR revealed that 44 (3.7%) samples were confirmed positive for
. A homology search for the generated sequences revealed a high percentage identity of 98-98.9% similarity to
,
, and
in the GenBank. Based on the results obtained herein, we conclude that there is a big diversity of
species; therefore, we suggest that this research should cover more geographical areas in order to reveal the true prevalence of this pathogen in the studied area because this will be a great step in the possible prevention of an outbreak that could have devastating effects on livestock production and human health in both the studied areas and South Africa at large.</description><identifier>ISSN: 2076-0817</identifier><identifier>EISSN: 2076-0817</identifier><identifier>DOI: 10.3390/pathogens9121061</identifier><identifier>PMID: 33353073</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Animals ; Annealing ; Arachnids ; Babesia ; Bird migration ; Birds ; Cattle ; Deoxyribonucleic acid ; DNA ; Domestication ; emergence ; Goats ; Homology ; Identification ; Importation ; ixodid ; Laboratories ; Livestock ; Livestock production ; Mitochondria ; Morphology ; outbreak ; Parasites ; Parasitic diseases ; Pathogens ; piroplasms ; Ribosomal DNA ; rRNA 12S ; rRNA 18S ; Sheep ; Species diversity ; Theileria ; Tick-borne diseases ; Ticks ; Vectors ; Wild animals</subject><ispartof>Pathogens (Basel), 2020-12, Vol.9 (12), p.1061</ispartof><rights>2020. This work is licensed under http://creativecommons.org/licenses/by/3.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2020 by the authors. 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c443t-6e7c7a401daaa5e69d02a1be5ffe36c29f2a886ab64250b7c5cd26bbef702bb3</cites><orcidid>0000-0002-9770-085X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2471972098/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2471972098?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25752,27923,27924,37011,44589,53790,53792,74897</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33353073$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Adelabu, Olusesan Adeyemi</creatorcontrib><creatorcontrib>Iweriebor, Benson Chuks</creatorcontrib><creatorcontrib>Okoh, Anthony Ifeanyi</creatorcontrib><creatorcontrib>Obi, Larry Chikwelu</creatorcontrib><title>Genomic Profiling for Piroplasms in Feeding Ixodid Ticks in the Eastern Cape, South Africa</title><title>Pathogens (Basel)</title><addtitle>Pathogens</addtitle><description>Importation of tick-infected animals and the uncontrollable migration of birds and wild animals across borders can lead to geographical expansion and redistribution of ticks and pathogen vectors, thus leading to the emergence and re-emergence of tick-borne diseases in humans and animals. Comparatively, little is known about the occurrence of piroplasms in ixodid ticks in the Eastern Cape, South Africa, thus necessitating this study, which is aimed at detecting piroplasms (
and
) from feeding tick samples collected from cattle, sheep, and goats in selected sites in the Eastern Cape, South Africa. A total of 1200 feeding ixodid ticks collected from farm animals at selected homesteads were first subjected to molecular identification using mitochondrial 12S ribosomal RNA (rRNA) gene by PCR and were further tested for the presence of piroplasms through amplification of the 18S rRNA gene via nested-PCR followed by sequencing of the PCR products. The results indicated that 853 (71.1%) corresponded to the genus
, 335 (27.9%) corresponded to genus
, and 12 (1%) corresponded to genus
.
and
were the most common identified ticks from this study. The 18S rRNA nested-PCR revealed that 44 (3.7%) samples were confirmed positive for
. A homology search for the generated sequences revealed a high percentage identity of 98-98.9% similarity to
,
, and
in the GenBank. Based on the results obtained herein, we conclude that there is a big diversity of
species; therefore, we suggest that this research should cover more geographical areas in order to reveal the true prevalence of this pathogen in the studied area because this will be a great step in the possible prevention of an outbreak that could have devastating effects on livestock production and human health in both the studied areas and South Africa at large.</description><subject>Animals</subject><subject>Annealing</subject><subject>Arachnids</subject><subject>Babesia</subject><subject>Bird migration</subject><subject>Birds</subject><subject>Cattle</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Domestication</subject><subject>emergence</subject><subject>Goats</subject><subject>Homology</subject><subject>Identification</subject><subject>Importation</subject><subject>ixodid</subject><subject>Laboratories</subject><subject>Livestock</subject><subject>Livestock production</subject><subject>Mitochondria</subject><subject>Morphology</subject><subject>outbreak</subject><subject>Parasites</subject><subject>Parasitic diseases</subject><subject>Pathogens</subject><subject>piroplasms</subject><subject>Ribosomal DNA</subject><subject>rRNA 12S</subject><subject>rRNA 18S</subject><subject>Sheep</subject><subject>Species diversity</subject><subject>Theileria</subject><subject>Tick-borne diseases</subject><subject>Ticks</subject><subject>Vectors</subject><subject>Wild animals</subject><issn>2076-0817</issn><issn>2076-0817</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkU1rGzEQhkVpaUKae09F0Gud6mMlrS6FYPJhCDQQn3IRs9qRLXe92krr0vz7rOM0JJ2LRjPzPhrxEvKZszMpLfs-wLhOK-yL5YIzzd-RY8GMnrGam_ev8iNyWsqGTVGz_f0jOZJSKsmMPCb3V9inbfT0NqcQu9ivaEiZ3sachg7KttDY00vEdt9Z_E1tbOky-l9P9XGN9ALKiLmncxjwG71Lu3FNz0OOHj6RDwG6gqfP5wlZXl4s59ezm59Xi_n5zcxXlRxnGo03UDHeAoBCbVsmgDeoQkCpvbBBQF1raHQlFGuMV74VumkwGCaaRp6QxQHbJti4Icct5AeXILqnQsorB3mMvkMnvBZeSaVUyyvPjGWKW22NFKqykoeJ9ePAGnbNFluP_ZihewN92-nj2q3SH2eMnraRE-DrMyCn3zsso9ukXe6n7ztRGW6NYLaepthhyudUSsbw8gJnbu-t-9_bSfLl9WYvgn9Oykc2gqFV</recordid><startdate>20201218</startdate><enddate>20201218</enddate><creator>Adelabu, Olusesan Adeyemi</creator><creator>Iweriebor, Benson Chuks</creator><creator>Okoh, Anthony Ifeanyi</creator><creator>Obi, Larry Chikwelu</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T7</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-9770-085X</orcidid></search><sort><creationdate>20201218</creationdate><title>Genomic Profiling for Piroplasms in Feeding Ixodid Ticks in the Eastern Cape, South Africa</title><author>Adelabu, Olusesan Adeyemi ; Iweriebor, Benson Chuks ; Okoh, Anthony Ifeanyi ; Obi, Larry Chikwelu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c443t-6e7c7a401daaa5e69d02a1be5ffe36c29f2a886ab64250b7c5cd26bbef702bb3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Animals</topic><topic>Annealing</topic><topic>Arachnids</topic><topic>Babesia</topic><topic>Bird migration</topic><topic>Birds</topic><topic>Cattle</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Domestication</topic><topic>emergence</topic><topic>Goats</topic><topic>Homology</topic><topic>Identification</topic><topic>Importation</topic><topic>ixodid</topic><topic>Laboratories</topic><topic>Livestock</topic><topic>Livestock production</topic><topic>Mitochondria</topic><topic>Morphology</topic><topic>outbreak</topic><topic>Parasites</topic><topic>Parasitic diseases</topic><topic>Pathogens</topic><topic>piroplasms</topic><topic>Ribosomal DNA</topic><topic>rRNA 12S</topic><topic>rRNA 18S</topic><topic>Sheep</topic><topic>Species diversity</topic><topic>Theileria</topic><topic>Tick-borne diseases</topic><topic>Ticks</topic><topic>Vectors</topic><topic>Wild animals</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Adelabu, Olusesan Adeyemi</creatorcontrib><creatorcontrib>Iweriebor, Benson Chuks</creatorcontrib><creatorcontrib>Okoh, Anthony Ifeanyi</creatorcontrib><creatorcontrib>Obi, Larry Chikwelu</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Pathogens (Basel)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Adelabu, Olusesan Adeyemi</au><au>Iweriebor, Benson Chuks</au><au>Okoh, Anthony Ifeanyi</au><au>Obi, Larry Chikwelu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genomic Profiling for Piroplasms in Feeding Ixodid Ticks in the Eastern Cape, South Africa</atitle><jtitle>Pathogens (Basel)</jtitle><addtitle>Pathogens</addtitle><date>2020-12-18</date><risdate>2020</risdate><volume>9</volume><issue>12</issue><spage>1061</spage><pages>1061-</pages><issn>2076-0817</issn><eissn>2076-0817</eissn><abstract>Importation of tick-infected animals and the uncontrollable migration of birds and wild animals across borders can lead to geographical expansion and redistribution of ticks and pathogen vectors, thus leading to the emergence and re-emergence of tick-borne diseases in humans and animals. Comparatively, little is known about the occurrence of piroplasms in ixodid ticks in the Eastern Cape, South Africa, thus necessitating this study, which is aimed at detecting piroplasms (
and
) from feeding tick samples collected from cattle, sheep, and goats in selected sites in the Eastern Cape, South Africa. A total of 1200 feeding ixodid ticks collected from farm animals at selected homesteads were first subjected to molecular identification using mitochondrial 12S ribosomal RNA (rRNA) gene by PCR and were further tested for the presence of piroplasms through amplification of the 18S rRNA gene via nested-PCR followed by sequencing of the PCR products. The results indicated that 853 (71.1%) corresponded to the genus
, 335 (27.9%) corresponded to genus
, and 12 (1%) corresponded to genus
.
and
were the most common identified ticks from this study. The 18S rRNA nested-PCR revealed that 44 (3.7%) samples were confirmed positive for
. A homology search for the generated sequences revealed a high percentage identity of 98-98.9% similarity to
,
, and
in the GenBank. Based on the results obtained herein, we conclude that there is a big diversity of
species; therefore, we suggest that this research should cover more geographical areas in order to reveal the true prevalence of this pathogen in the studied area because this will be a great step in the possible prevention of an outbreak that could have devastating effects on livestock production and human health in both the studied areas and South Africa at large.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>33353073</pmid><doi>10.3390/pathogens9121061</doi><orcidid>https://orcid.org/0000-0002-9770-085X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Animals Annealing Arachnids Babesia Bird migration Birds Cattle Deoxyribonucleic acid DNA Domestication emergence Goats Homology Identification Importation ixodid Laboratories Livestock Livestock production Mitochondria Morphology outbreak Parasites Parasitic diseases Pathogens piroplasms Ribosomal DNA rRNA 12S rRNA 18S Sheep Species diversity Theileria Tick-borne diseases Ticks Vectors Wild animals |
title | Genomic Profiling for Piroplasms in Feeding Ixodid Ticks in the Eastern Cape, South Africa |
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