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Opinion: The Key Steps in the Origin of Life to the Formation of the Eukaryotic Cell
The path from life's origin to the emergence of the eukaryotic cell was long and complex, and as such it is rarely treated in one publication. Here, we offer a sketch of this path, recognizing that there are points of disagreement and that many transitions are still shrouded in mystery. We assu...
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Published in: | Life (Basel, Switzerland) Switzerland), 2024-02, Vol.14 (2), p.226 |
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description | The path from life's origin to the emergence of the eukaryotic cell was long and complex, and as such it is rarely treated in one publication. Here, we offer a sketch of this path, recognizing that there are points of disagreement and that many transitions are still shrouded in mystery. We assume life developed within microchambers of an alkaline hydrothermal vent system. Initial simple reactions were built into more sophisticated reflexively autocatalytic food-generated networks (RAFs), laying the foundation for life's anastomosing metabolism, and eventually for the origin of RNA, which functioned as a genetic repository and as a catalyst (ribozymes). Eventually, protein synthesis developed, leading to life's biology becoming dominated by enzymes and not ribozymes. Subsequent enzymatic innovation included ATP synthase, which generates ATP, fueled by the proton gradient between the alkaline vent flux and the acidic sea. This gradient was later internalized via the evolution of the electron transport chain, a preadaptation for the subsequent emergence of the vent creatures from their microchamber cradles. Differences between bacteria and archaea suggests cellularization evolved at least twice. Later, the bacterial development of oxidative phosphorylation and the archaeal development of proteins to stabilize its DNA laid the foundation for the merger that led to the formation of eukaryotic cells. |
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Here, we offer a sketch of this path, recognizing that there are points of disagreement and that many transitions are still shrouded in mystery. We assume life developed within microchambers of an alkaline hydrothermal vent system. Initial simple reactions were built into more sophisticated reflexively autocatalytic food-generated networks (RAFs), laying the foundation for life's anastomosing metabolism, and eventually for the origin of RNA, which functioned as a genetic repository and as a catalyst (ribozymes). Eventually, protein synthesis developed, leading to life's biology becoming dominated by enzymes and not ribozymes. Subsequent enzymatic innovation included ATP synthase, which generates ATP, fueled by the proton gradient between the alkaline vent flux and the acidic sea. This gradient was later internalized via the evolution of the electron transport chain, a preadaptation for the subsequent emergence of the vent creatures from their microchamber cradles. 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Later, the bacterial development of oxidative phosphorylation and the archaeal development of proteins to stabilize its DNA laid the foundation for the merger that led to the formation of eukaryotic cells.</description><identifier>ISSN: 2075-1729</identifier><identifier>EISSN: 2075-1729</identifier><identifier>DOI: 10.3390/life14020226</identifier><identifier>PMID: 38398735</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>acetyl-CoA pathway ; Adaptation ; alkaline hydrothermal vent microchambers ; ATP ; ATP synthase ; Bacteria ; Biochemistry ; Biological research ; Biology, Experimental ; Catalysts ; Cell development (Biology) ; Chemical synthesis ; Electron transport ; Electron transport chain ; Eukaryotes ; Evolution ; Hydrothermal vents ; Information storage ; Life ; LUCA ; Metabolism ; Natural history ; Origin ; origin of life ; Oxidative phosphorylation ; Phosphorylation ; Photosynthesis ; Physiological aspects ; prebiotic chemistry ; Protein biosynthesis ; Protein synthesis ; Proteins ; Raw materials ; Ribonucleic acid ; Ribozymes ; RNA ; RNA world</subject><ispartof>Life (Basel, Switzerland), 2024-02, Vol.14 (2), p.226</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c448t-8c39774b470a1dd7ffed96fbccc5990c41b8456c732cc2c085ad6a97f25ecea43</cites><orcidid>0000-0001-7832-0950</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2930991454/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2930991454?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,25753,27924,27925,37012,44590,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38398735$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Brunk, Clifford F</creatorcontrib><creatorcontrib>Marshall, Charles R</creatorcontrib><title>Opinion: The Key Steps in the Origin of Life to the Formation of the Eukaryotic Cell</title><title>Life (Basel, Switzerland)</title><addtitle>Life (Basel)</addtitle><description>The path from life's origin to the emergence of the eukaryotic cell was long and complex, and as such it is rarely treated in one publication. Here, we offer a sketch of this path, recognizing that there are points of disagreement and that many transitions are still shrouded in mystery. We assume life developed within microchambers of an alkaline hydrothermal vent system. Initial simple reactions were built into more sophisticated reflexively autocatalytic food-generated networks (RAFs), laying the foundation for life's anastomosing metabolism, and eventually for the origin of RNA, which functioned as a genetic repository and as a catalyst (ribozymes). Eventually, protein synthesis developed, leading to life's biology becoming dominated by enzymes and not ribozymes. Subsequent enzymatic innovation included ATP synthase, which generates ATP, fueled by the proton gradient between the alkaline vent flux and the acidic sea. This gradient was later internalized via the evolution of the electron transport chain, a preadaptation for the subsequent emergence of the vent creatures from their microchamber cradles. 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Later, the bacterial development of oxidative phosphorylation and the archaeal development of proteins to stabilize its DNA laid the foundation for the merger that led to the formation of eukaryotic cells.</description><subject>acetyl-CoA pathway</subject><subject>Adaptation</subject><subject>alkaline hydrothermal vent microchambers</subject><subject>ATP</subject><subject>ATP synthase</subject><subject>Bacteria</subject><subject>Biochemistry</subject><subject>Biological research</subject><subject>Biology, Experimental</subject><subject>Catalysts</subject><subject>Cell development (Biology)</subject><subject>Chemical synthesis</subject><subject>Electron transport</subject><subject>Electron transport chain</subject><subject>Eukaryotes</subject><subject>Evolution</subject><subject>Hydrothermal vents</subject><subject>Information storage</subject><subject>Life</subject><subject>LUCA</subject><subject>Metabolism</subject><subject>Natural history</subject><subject>Origin</subject><subject>origin of life</subject><subject>Oxidative phosphorylation</subject><subject>Phosphorylation</subject><subject>Photosynthesis</subject><subject>Physiological aspects</subject><subject>prebiotic chemistry</subject><subject>Protein biosynthesis</subject><subject>Protein synthesis</subject><subject>Proteins</subject><subject>Raw materials</subject><subject>Ribonucleic acid</subject><subject>Ribozymes</subject><subject>RNA</subject><subject>RNA world</subject><issn>2075-1729</issn><issn>2075-1729</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptkk1rGzEQhkVpaUKaW89loadCner7o7dgktbEYGjcs9BqJVfu7sqVtJD8-8pxksZQ6aDh1TOvZsQA8B7BC0IU_NIH7xCFGGLMX4FTDAWbIYHV6xfxCTjPeQvr4gxxSd-CEyKJkoKwU7Be7cIY4vi1Wf9yzY27b26L2-UmjE2pwiqFTQ2jb5b1pabEB_U6psGUmrW_2AtX02-T7mMJtpm7vn8H3njTZ3f-eJ6Bn9dX6_n32XL1bTG_XM4spbLMpCVKCNpSAQ3qOuG96xT3rbWWKQUtRa2kjFtBsLXYQslMx40SHjNnnaHkDCwOvl00W71LYahV6GiCfhBi2miTalG909i3hrX1p6xwtK3dt5zWR4203FPKZfX6ePDapfhncrnobZzSWMvXWBGoFKKM_qM2ppqG0ceSjB1CtvpSSIogkkhU6uI_VN2dG4KNo_Oh6kcJn44SKlPcXdmYKWe9uP1xzH4-sDbFnJPzz40jqPdDoV8ORcU_PPY1tYPrnuGnESB_AZrjre8</recordid><startdate>20240201</startdate><enddate>20240201</enddate><creator>Brunk, Clifford F</creator><creator>Marshall, Charles R</creator><general>MDPI AG</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>RC3</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-7832-0950</orcidid></search><sort><creationdate>20240201</creationdate><title>Opinion: The Key Steps in the Origin of Life to the Formation of the Eukaryotic Cell</title><author>Brunk, Clifford F ; Marshall, Charles R</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c448t-8c39774b470a1dd7ffed96fbccc5990c41b8456c732cc2c085ad6a97f25ecea43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>acetyl-CoA pathway</topic><topic>Adaptation</topic><topic>alkaline hydrothermal vent microchambers</topic><topic>ATP</topic><topic>ATP synthase</topic><topic>Bacteria</topic><topic>Biochemistry</topic><topic>Biological research</topic><topic>Biology, Experimental</topic><topic>Catalysts</topic><topic>Cell development (Biology)</topic><topic>Chemical synthesis</topic><topic>Electron transport</topic><topic>Electron transport chain</topic><topic>Eukaryotes</topic><topic>Evolution</topic><topic>Hydrothermal vents</topic><topic>Information storage</topic><topic>Life</topic><topic>LUCA</topic><topic>Metabolism</topic><topic>Natural history</topic><topic>Origin</topic><topic>origin of life</topic><topic>Oxidative phosphorylation</topic><topic>Phosphorylation</topic><topic>Photosynthesis</topic><topic>Physiological aspects</topic><topic>prebiotic chemistry</topic><topic>Protein biosynthesis</topic><topic>Protein synthesis</topic><topic>Proteins</topic><topic>Raw materials</topic><topic>Ribonucleic acid</topic><topic>Ribozymes</topic><topic>RNA</topic><topic>RNA world</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Brunk, Clifford F</creatorcontrib><creatorcontrib>Marshall, Charles R</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>Biological Sciences</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>Publicly Available Content Database (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>Genetics Abstracts</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Life (Basel, Switzerland)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Brunk, Clifford F</au><au>Marshall, Charles R</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Opinion: The Key Steps in the Origin of Life to the Formation of the Eukaryotic Cell</atitle><jtitle>Life (Basel, Switzerland)</jtitle><addtitle>Life (Basel)</addtitle><date>2024-02-01</date><risdate>2024</risdate><volume>14</volume><issue>2</issue><spage>226</spage><pages>226-</pages><issn>2075-1729</issn><eissn>2075-1729</eissn><abstract>The path from life's origin to the emergence of the eukaryotic cell was long and complex, and as such it is rarely treated in one publication. 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subjects | acetyl-CoA pathway Adaptation alkaline hydrothermal vent microchambers ATP ATP synthase Bacteria Biochemistry Biological research Biology, Experimental Catalysts Cell development (Biology) Chemical synthesis Electron transport Electron transport chain Eukaryotes Evolution Hydrothermal vents Information storage Life LUCA Metabolism Natural history Origin origin of life Oxidative phosphorylation Phosphorylation Photosynthesis Physiological aspects prebiotic chemistry Protein biosynthesis Protein synthesis Proteins Raw materials Ribonucleic acid Ribozymes RNA RNA world |
title | Opinion: The Key Steps in the Origin of Life to the Formation of the Eukaryotic Cell |
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