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SdiA Improves the Acid Tolerance of E. coli by Regulating GadW and GadY Expression
The acid tolerance mechanism is important for Escherichia coli to resist acidic conditions encountered in mammalian host digestive tract environment. Here, we explored how the LuxR protein SdiA influenced E. coli acid tolerance ability in the context of the glutamate- and glutamine-dependent acid re...
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Published in: | Frontiers in microbiology 2020-06, Vol.11, p.1078-1078 |
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container_title | Frontiers in microbiology |
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description | The acid tolerance mechanism is important for
Escherichia coli
to resist acidic conditions encountered in mammalian host digestive tract environment. Here, we explored how the LuxR protein SdiA influenced
E. coli
acid tolerance ability in the context of the glutamate- and glutamine-dependent acid resistance system (AR2). First, using a growth and acid shock assay under different acid stresses, we demonstrated that the deletion of
sdiA
in
SM10
λ
pir
or
BW25113
led to impaired growth under the acidic environment of pH 3–6, which was restored by complementary expression of SdiA. Next, transcriptome sequencing and qPCR disclosed that the expression of glutamate decarboxylase W (GadW) and GadY, the key members of the AR2 system, were regulated by SdiA. Further, β-galactosidase reporter assays showed that the promoter activity of
gadW
and
gadY
was positively regulated by SdiA. Moreover, qPCR and β-galactosidase reporter assays confirmed that the regulation of SdiA on GadW, but not GadY, could be enhanced by quorum sensing (QS) signal molecules AHLs. Collectively, these data suggest that SdiA plays a crucial role in acid tolerance regulation of
E. coli
. Our findings provide new insights into the important contribution of quorum sensing system AHLs–SdiA to the networks that regulate acid tolerance. |
doi_str_mv | 10.3389/fmicb.2020.01078 |
format | article |
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Escherichia coli
to resist acidic conditions encountered in mammalian host digestive tract environment. Here, we explored how the LuxR protein SdiA influenced
E. coli
acid tolerance ability in the context of the glutamate- and glutamine-dependent acid resistance system (AR2). First, using a growth and acid shock assay under different acid stresses, we demonstrated that the deletion of
sdiA
in
SM10
λ
pir
or
BW25113
led to impaired growth under the acidic environment of pH 3–6, which was restored by complementary expression of SdiA. Next, transcriptome sequencing and qPCR disclosed that the expression of glutamate decarboxylase W (GadW) and GadY, the key members of the AR2 system, were regulated by SdiA. Further, β-galactosidase reporter assays showed that the promoter activity of
gadW
and
gadY
was positively regulated by SdiA. Moreover, qPCR and β-galactosidase reporter assays confirmed that the regulation of SdiA on GadW, but not GadY, could be enhanced by quorum sensing (QS) signal molecules AHLs. Collectively, these data suggest that SdiA plays a crucial role in acid tolerance regulation of
E. coli
. Our findings provide new insights into the important contribution of quorum sensing system AHLs–SdiA to the networks that regulate acid tolerance.</description><identifier>ISSN: 1664-302X</identifier><identifier>EISSN: 1664-302X</identifier><identifier>DOI: 10.3389/fmicb.2020.01078</identifier><identifier>PMID: 32582066</identifier><language>eng</language><publisher>Frontiers Media S.A</publisher><subject>acid tolerance ; Escherichia coli ; glutamate decarboxylase W (GadW) ; glutamate decarboxylase Y (GadY) ; Microbiology ; SdiA</subject><ispartof>Frontiers in microbiology, 2020-06, Vol.11, p.1078-1078</ispartof><rights>Copyright © 2020 Ma, Zhang, Xu, Li, Xiao, Qiu, Zhang, Long, Zheng, Huang, Chen and Lu. 2020 Ma, Zhang, Xu, Li, Xiao, Qiu, Zhang, Long, Zheng, Huang, Chen and Lu</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3548-4b9ea7bd33b5dbd6d6e27a2be31b7bfd1c5d9a61675e673a33e10f5a5da992693</citedby><cites>FETCH-LOGICAL-c3548-4b9ea7bd33b5dbd6d6e27a2be31b7bfd1c5d9a61675e673a33e10f5a5da992693</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7286202/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7286202/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids></links><search><creatorcontrib>Ma, Xingyan</creatorcontrib><creatorcontrib>Zhang, Shebin</creatorcontrib><creatorcontrib>Xu, Zhenjie</creatorcontrib><creatorcontrib>Li, Honglin</creatorcontrib><creatorcontrib>Xiao, Qian</creatorcontrib><creatorcontrib>Qiu, Feng</creatorcontrib><creatorcontrib>Zhang, Weizheng</creatorcontrib><creatorcontrib>Long, Yifei</creatorcontrib><creatorcontrib>Zheng, Dexiang</creatorcontrib><creatorcontrib>Huang, Bin</creatorcontrib><creatorcontrib>Chen, Cha</creatorcontrib><creatorcontrib>Lu, Yang</creatorcontrib><title>SdiA Improves the Acid Tolerance of E. coli by Regulating GadW and GadY Expression</title><title>Frontiers in microbiology</title><description>The acid tolerance mechanism is important for
Escherichia coli
to resist acidic conditions encountered in mammalian host digestive tract environment. Here, we explored how the LuxR protein SdiA influenced
E. coli
acid tolerance ability in the context of the glutamate- and glutamine-dependent acid resistance system (AR2). First, using a growth and acid shock assay under different acid stresses, we demonstrated that the deletion of
sdiA
in
SM10
λ
pir
or
BW25113
led to impaired growth under the acidic environment of pH 3–6, which was restored by complementary expression of SdiA. Next, transcriptome sequencing and qPCR disclosed that the expression of glutamate decarboxylase W (GadW) and GadY, the key members of the AR2 system, were regulated by SdiA. Further, β-galactosidase reporter assays showed that the promoter activity of
gadW
and
gadY
was positively regulated by SdiA. Moreover, qPCR and β-galactosidase reporter assays confirmed that the regulation of SdiA on GadW, but not GadY, could be enhanced by quorum sensing (QS) signal molecules AHLs. Collectively, these data suggest that SdiA plays a crucial role in acid tolerance regulation of
E. coli
. Our findings provide new insights into the important contribution of quorum sensing system AHLs–SdiA to the networks that regulate acid tolerance.</description><subject>acid tolerance</subject><subject>Escherichia coli</subject><subject>glutamate decarboxylase W (GadW)</subject><subject>glutamate decarboxylase Y (GadY)</subject><subject>Microbiology</subject><subject>SdiA</subject><issn>1664-302X</issn><issn>1664-302X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkUFrGzEQRkVpaUKae4869mJX0qy0u5eCCW5qCBTSlLYnMZJmHYXdlSutQ_Pvu7ZDaeYyw8zHm8Nj7L0US4Cm_dgN0bulEkoshRR184qdS2OqBQj18_V_8xm7LOVBzFXNWSHesjNQulHCmHN2-y3EFd8Mu5weqfDpnvjKx8DvUk8ZR088dXy95D71kbsnfkvbfY9THLf8GsMPjmM4DL_4-s8uUykxje_Ymw77QpfP_YJ9_7y-u_qyuPl6vbla3Sw86KpZVK4lrF0AcDq4YIIhVaNyBNLVrgvS69CikabWZGpAAJKi06gDtq0yLVywzYkbEj7YXY4D5iebMNrjIuWtxTxF35MF4Y1vnAACrILR2FVGoldtI4RxuptZn06s3d4NFDyNU8b-BfTlZYz3dpseba0aMyuYAR-eATn93lOZ7BCLp77HkdK-WFXJGtr5IcxRcYr6nErJ1P17I4U9mLVHs_Zg1h7Nwl_GoJVY</recordid><startdate>20200603</startdate><enddate>20200603</enddate><creator>Ma, Xingyan</creator><creator>Zhang, Shebin</creator><creator>Xu, Zhenjie</creator><creator>Li, Honglin</creator><creator>Xiao, Qian</creator><creator>Qiu, Feng</creator><creator>Zhang, Weizheng</creator><creator>Long, Yifei</creator><creator>Zheng, Dexiang</creator><creator>Huang, Bin</creator><creator>Chen, Cha</creator><creator>Lu, Yang</creator><general>Frontiers Media S.A</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20200603</creationdate><title>SdiA Improves the Acid Tolerance of E. coli by Regulating GadW and GadY Expression</title><author>Ma, Xingyan ; Zhang, Shebin ; Xu, Zhenjie ; Li, Honglin ; Xiao, Qian ; Qiu, Feng ; Zhang, Weizheng ; Long, Yifei ; Zheng, Dexiang ; Huang, Bin ; Chen, Cha ; Lu, Yang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3548-4b9ea7bd33b5dbd6d6e27a2be31b7bfd1c5d9a61675e673a33e10f5a5da992693</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>acid tolerance</topic><topic>Escherichia coli</topic><topic>glutamate decarboxylase W (GadW)</topic><topic>glutamate decarboxylase Y (GadY)</topic><topic>Microbiology</topic><topic>SdiA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ma, Xingyan</creatorcontrib><creatorcontrib>Zhang, Shebin</creatorcontrib><creatorcontrib>Xu, Zhenjie</creatorcontrib><creatorcontrib>Li, Honglin</creatorcontrib><creatorcontrib>Xiao, Qian</creatorcontrib><creatorcontrib>Qiu, Feng</creatorcontrib><creatorcontrib>Zhang, Weizheng</creatorcontrib><creatorcontrib>Long, Yifei</creatorcontrib><creatorcontrib>Zheng, Dexiang</creatorcontrib><creatorcontrib>Huang, Bin</creatorcontrib><creatorcontrib>Chen, Cha</creatorcontrib><creatorcontrib>Lu, Yang</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ma, Xingyan</au><au>Zhang, Shebin</au><au>Xu, Zhenjie</au><au>Li, Honglin</au><au>Xiao, Qian</au><au>Qiu, Feng</au><au>Zhang, Weizheng</au><au>Long, Yifei</au><au>Zheng, Dexiang</au><au>Huang, Bin</au><au>Chen, Cha</au><au>Lu, Yang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>SdiA Improves the Acid Tolerance of E. coli by Regulating GadW and GadY Expression</atitle><jtitle>Frontiers in microbiology</jtitle><date>2020-06-03</date><risdate>2020</risdate><volume>11</volume><spage>1078</spage><epage>1078</epage><pages>1078-1078</pages><issn>1664-302X</issn><eissn>1664-302X</eissn><abstract>The acid tolerance mechanism is important for
Escherichia coli
to resist acidic conditions encountered in mammalian host digestive tract environment. Here, we explored how the LuxR protein SdiA influenced
E. coli
acid tolerance ability in the context of the glutamate- and glutamine-dependent acid resistance system (AR2). First, using a growth and acid shock assay under different acid stresses, we demonstrated that the deletion of
sdiA
in
SM10
λ
pir
or
BW25113
led to impaired growth under the acidic environment of pH 3–6, which was restored by complementary expression of SdiA. Next, transcriptome sequencing and qPCR disclosed that the expression of glutamate decarboxylase W (GadW) and GadY, the key members of the AR2 system, were regulated by SdiA. Further, β-galactosidase reporter assays showed that the promoter activity of
gadW
and
gadY
was positively regulated by SdiA. Moreover, qPCR and β-galactosidase reporter assays confirmed that the regulation of SdiA on GadW, but not GadY, could be enhanced by quorum sensing (QS) signal molecules AHLs. Collectively, these data suggest that SdiA plays a crucial role in acid tolerance regulation of
E. coli
. Our findings provide new insights into the important contribution of quorum sensing system AHLs–SdiA to the networks that regulate acid tolerance.</abstract><pub>Frontiers Media S.A</pub><pmid>32582066</pmid><doi>10.3389/fmicb.2020.01078</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | acid tolerance Escherichia coli glutamate decarboxylase W (GadW) glutamate decarboxylase Y (GadY) Microbiology SdiA |
title | SdiA Improves the Acid Tolerance of E. coli by Regulating GadW and GadY Expression |
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