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Diversity and Current Classification of dsRNA Bacteriophages
Half a century has passed since the discovery of Pseudomonas phage phi6, the first enveloped dsRNA bacteriophage to be isolated. It remained the sole known dsRNA phage for a quarter of a century and the only recognised member of the family until the year 2018. After the initial discovery of phi6, ad...
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Published in: | Viruses 2023-10, Vol.15 (11), p.2154 |
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description | Half a century has passed since the discovery of Pseudomonas phage phi6, the first enveloped dsRNA bacteriophage to be isolated. It remained the sole known dsRNA phage for a quarter of a century and the only recognised member of the
family until the year 2018. After the initial discovery of phi6, additional dsRNA phages have been isolated from globally distant locations and identified in metatranscriptomic datasets, suggesting that this virus type is more ubiquitous in nature than previously acknowledged. Most identified dsRNA phages infect
strains and utilise either pilus or lipopolysaccharide components of the host as the primary receptor. In addition to the receptor-mediated strictly lytic lifestyle, an alternative persistent infection strategy has been described for some dsRNA phages. To date, complete genome sequences of fourteen dsRNA phage isolates are available. Despite the high sequence diversity, similar sets of genes can typically be found in the genomes of dsRNA phages, suggesting shared evolutionary trajectories. This review provides a brief overview of the recognised members of the
virus family and related dsRNA phage isolates, outlines the current classification of dsRNA phages, and discusses their relationships with eukaryotic RNA viruses. |
doi_str_mv | 10.3390/v15112154 |
format | article |
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family until the year 2018. After the initial discovery of phi6, additional dsRNA phages have been isolated from globally distant locations and identified in metatranscriptomic datasets, suggesting that this virus type is more ubiquitous in nature than previously acknowledged. Most identified dsRNA phages infect
strains and utilise either pilus or lipopolysaccharide components of the host as the primary receptor. In addition to the receptor-mediated strictly lytic lifestyle, an alternative persistent infection strategy has been described for some dsRNA phages. To date, complete genome sequences of fourteen dsRNA phage isolates are available. Despite the high sequence diversity, similar sets of genes can typically be found in the genomes of dsRNA phages, suggesting shared evolutionary trajectories. This review provides a brief overview of the recognised members of the
virus family and related dsRNA phage isolates, outlines the current classification of dsRNA phages, and discusses their relationships with eukaryotic RNA viruses.</description><identifier>ISSN: 1999-4915</identifier><identifier>EISSN: 1999-4915</identifier><identifier>DOI: 10.3390/v15112154</identifier><identifier>PMID: 38005832</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Bacteria ; bacteriophage ; Bacteriophages - genetics ; Classification ; cystovirus ; Datasets ; Double-stranded RNA ; dsRNA virus ; Electron microscopes ; Genes ; Genome, Viral ; Genomes ; Genomics ; Gram-positive bacteria ; Health aspects ; Infections ; Lipopolysaccharides ; Phages ; Pseudomonas ; Pseudomonas Phages - genetics ; RNA ; RNA viruses ; Tomography ; Transmission electron microscopy ; virus taxonomy ; Viruses</subject><ispartof>Viruses, 2023-10, Vol.15 (11), p.2154</ispartof><rights>COPYRIGHT 2023 MDPI AG</rights><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c442t-77c00c465c3cfcff554ad787fe1d9fd3117ae2f2c11b01be0b2f91497198ee143</citedby><cites>FETCH-LOGICAL-c442t-77c00c465c3cfcff554ad787fe1d9fd3117ae2f2c11b01be0b2f91497198ee143</cites><orcidid>0000-0003-0901-5068 ; 0000-0002-4775-3670 ; 0009-0000-1210-012X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2893348747/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2893348747?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,25731,27901,27902,36989,36990,38493,43871,44566,74382,75096</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38005832$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mäntynen, Sari</creatorcontrib><creatorcontrib>Salomaa, Meri M</creatorcontrib><creatorcontrib>Poranen, Minna M</creatorcontrib><title>Diversity and Current Classification of dsRNA Bacteriophages</title><title>Viruses</title><addtitle>Viruses</addtitle><description>Half a century has passed since the discovery of Pseudomonas phage phi6, the first enveloped dsRNA bacteriophage to be isolated. It remained the sole known dsRNA phage for a quarter of a century and the only recognised member of the
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strains and utilise either pilus or lipopolysaccharide components of the host as the primary receptor. In addition to the receptor-mediated strictly lytic lifestyle, an alternative persistent infection strategy has been described for some dsRNA phages. To date, complete genome sequences of fourteen dsRNA phage isolates are available. Despite the high sequence diversity, similar sets of genes can typically be found in the genomes of dsRNA phages, suggesting shared evolutionary trajectories. This review provides a brief overview of the recognised members of the
virus family and related dsRNA phage isolates, outlines the current classification of dsRNA phages, and discusses their relationships with eukaryotic RNA viruses.</description><subject>Bacteria</subject><subject>bacteriophage</subject><subject>Bacteriophages - genetics</subject><subject>Classification</subject><subject>cystovirus</subject><subject>Datasets</subject><subject>Double-stranded RNA</subject><subject>dsRNA virus</subject><subject>Electron microscopes</subject><subject>Genes</subject><subject>Genome, Viral</subject><subject>Genomes</subject><subject>Genomics</subject><subject>Gram-positive bacteria</subject><subject>Health aspects</subject><subject>Infections</subject><subject>Lipopolysaccharides</subject><subject>Phages</subject><subject>Pseudomonas</subject><subject>Pseudomonas Phages - genetics</subject><subject>RNA</subject><subject>RNA viruses</subject><subject>Tomography</subject><subject>Transmission electron microscopy</subject><subject>virus taxonomy</subject><subject>Viruses</subject><issn>1999-4915</issn><issn>1999-4915</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>COVID</sourceid><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkUFv1DAQhS0EoqVw4A-gSFzgsK0ndmJb4rJdWlqpAgnB2ZrY48WrbLzYSaX-e9JuWVBPMxp9856eHmNvgZ8KYfjZLTQANTTyGTsGY8xCGmie_7cfsVelbDhvW8PVS3YkNOeNFvUx-_Q53lIucbyrcPDVasqZhrFa9VhKDNHhGNNQpVD58v3rsjpHN1KOafcL11ResxcB-0JvHucJ-3l58WN1tbj59uV6tbxZOCnrcaGU49zJtnHCBRdC00j0SqtA4E3wAkAh1aF2AB2HjnhXBwPSKDCaCKQ4Ydd7XZ9wY3c5bjHf2YTRPhxSXlvMY3Q9WSnM_O3Ja2MkCtdpJF4jzFcfNPBZ68Nea5fT74nKaLexOOp7HChNxdbaCC0b3ZoZff8E3aQpD3PSB0pIraT6R61x9o9DSGNGdy9ql0pJoZRq25n6uKdcTqVkCocYwO19ifZQ4sy-e_Sdui35A_m3NfEHQbSTxg</recordid><startdate>20231025</startdate><enddate>20231025</enddate><creator>Mäntynen, Sari</creator><creator>Salomaa, Meri M</creator><creator>Poranen, Minna M</creator><general>MDPI AG</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>COVID</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>PHGZM</scope><scope>PHGZT</scope><scope>PIMPY</scope><scope>PJZUB</scope><scope>PKEHL</scope><scope>PPXIY</scope><scope>PQEST</scope><scope>PQGLB</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-0901-5068</orcidid><orcidid>https://orcid.org/0000-0002-4775-3670</orcidid><orcidid>https://orcid.org/0009-0000-1210-012X</orcidid></search><sort><creationdate>20231025</creationdate><title>Diversity and Current Classification of dsRNA Bacteriophages</title><author>Mäntynen, Sari ; 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strains and utilise either pilus or lipopolysaccharide components of the host as the primary receptor. In addition to the receptor-mediated strictly lytic lifestyle, an alternative persistent infection strategy has been described for some dsRNA phages. To date, complete genome sequences of fourteen dsRNA phage isolates are available. Despite the high sequence diversity, similar sets of genes can typically be found in the genomes of dsRNA phages, suggesting shared evolutionary trajectories. This review provides a brief overview of the recognised members of the
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subjects | Bacteria bacteriophage Bacteriophages - genetics Classification cystovirus Datasets Double-stranded RNA dsRNA virus Electron microscopes Genes Genome, Viral Genomes Genomics Gram-positive bacteria Health aspects Infections Lipopolysaccharides Phages Pseudomonas Pseudomonas Phages - genetics RNA RNA viruses Tomography Transmission electron microscopy virus taxonomy Viruses |
title | Diversity and Current Classification of dsRNA Bacteriophages |
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