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Structure and function of lactate dehydrogenase from hagfish
The lactate dehydrogenases (LDHs) in hagfish have been estimated to be the prototype of those in higher vertebrates. The effects of high hydrostatic pressure from 0.1 to 100 MPa on LDH activities from three hagfishes were examined. The LDH activities of Eptatretus burgeri, living at 45-60 m, were co...
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Published in: | Marine drugs 2010-03, Vol.8 (3), p.594-607 |
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description | The lactate dehydrogenases (LDHs) in hagfish have been estimated to be the prototype of those in higher vertebrates. The effects of high hydrostatic pressure from 0.1 to 100 MPa on LDH activities from three hagfishes were examined. The LDH activities of Eptatretus burgeri, living at 45-60 m, were completely lost at 5 MPa. In contrast, LDH-A and -B in Eptatretus okinoseanus maintained 70% of their activities even at 100 MPa. These results show that the deeper the habitat, the higher the tolerance to pressure. To elucidate the molecular mechanisms for adaptation to high pressure, we compared the amino acid sequences and three-dimensional structures of LDHs in these hagfish. There were differences in six amino acids (6, 10, 20, 156, 269, and 341). These amino acidresidues are likely to contribute to the stability of the E. okinoseanus LDH under high-pressure conditions. The amino acids responsible for the pressure tolerance of hagfish are the same in both human and hagfish LDHs, and one substitution that occurred as an adaptation during evolution is coincident with that observed in a human disease. Mutation of these amino acids can cause anomalies that may be implicated in the development of human diseases. |
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The effects of high hydrostatic pressure from 0.1 to 100 MPa on LDH activities from three hagfishes were examined. The LDH activities of Eptatretus burgeri, living at 45-60 m, were completely lost at 5 MPa. In contrast, LDH-A and -B in Eptatretus okinoseanus maintained 70% of their activities even at 100 MPa. These results show that the deeper the habitat, the higher the tolerance to pressure. To elucidate the molecular mechanisms for adaptation to high pressure, we compared the amino acid sequences and three-dimensional structures of LDHs in these hagfish. There were differences in six amino acids (6, 10, 20, 156, 269, and 341). These amino acidresidues are likely to contribute to the stability of the E. okinoseanus LDH under high-pressure conditions. The amino acids responsible for the pressure tolerance of hagfish are the same in both human and hagfish LDHs, and one substitution that occurred as an adaptation during evolution is coincident with that observed in a human disease. Mutation of these amino acids can cause anomalies that may be implicated in the development of human diseases.</description><identifier>ISSN: 1660-3397</identifier><identifier>EISSN: 1660-3397</identifier><identifier>DOI: 10.3390/md8030594</identifier><identifier>PMID: 20411117</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Adaptation, Physiological ; Amino Acid Sequence ; Animals ; Enzyme Stability ; evolutionary medicine ; hagfish ; Hagfishes - classification ; Hagfishes - physiology ; high-pressure adaptation ; Humans ; L-Lactate Dehydrogenase - chemistry ; L-Lactate Dehydrogenase - metabolism ; lactate dehydrogenase ; Models, Molecular ; Molecular Sequence Data ; Muscle, Skeletal - enzymology ; Myocardium - enzymology ; Phylogeny ; Pressure ; Protein Structure, Tertiary ; Review ; Sequence Alignment ; Temperature</subject><ispartof>Marine drugs, 2010-03, Vol.8 (3), p.594-607</ispartof><rights>Copyright MDPI AG 2010</rights><rights>2010 by the authors; licensee Molecular Diversity Preservation International, Basel, Switzerland 2010</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c566t-459499c8cb911bf9694717ed04a35265df16596a3b40d1a4681690ff59fc0023</citedby><cites>FETCH-LOGICAL-c566t-459499c8cb911bf9694717ed04a35265df16596a3b40d1a4681690ff59fc0023</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1536070568/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1536070568?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,313,314,727,780,784,792,885,25753,27922,27924,27925,37012,37013,44590,53791,53793,74998</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/20411117$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nishiguchi, Yoshikazu</creatorcontrib><creatorcontrib>Ito, Nobue</creatorcontrib><creatorcontrib>Okada, Mitsumasa</creatorcontrib><title>Structure and function of lactate dehydrogenase from hagfish</title><title>Marine drugs</title><addtitle>Mar Drugs</addtitle><description>The lactate dehydrogenases (LDHs) in hagfish have been estimated to be the prototype of those in higher vertebrates. The effects of high hydrostatic pressure from 0.1 to 100 MPa on LDH activities from three hagfishes were examined. The LDH activities of Eptatretus burgeri, living at 45-60 m, were completely lost at 5 MPa. In contrast, LDH-A and -B in Eptatretus okinoseanus maintained 70% of their activities even at 100 MPa. These results show that the deeper the habitat, the higher the tolerance to pressure. To elucidate the molecular mechanisms for adaptation to high pressure, we compared the amino acid sequences and three-dimensional structures of LDHs in these hagfish. There were differences in six amino acids (6, 10, 20, 156, 269, and 341). These amino acidresidues are likely to contribute to the stability of the E. okinoseanus LDH under high-pressure conditions. The amino acids responsible for the pressure tolerance of hagfish are the same in both human and hagfish LDHs, and one substitution that occurred as an adaptation during evolution is coincident with that observed in a human disease. Mutation of these amino acids can cause anomalies that may be implicated in the development of human diseases.</description><subject>Adaptation, Physiological</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Enzyme Stability</subject><subject>evolutionary medicine</subject><subject>hagfish</subject><subject>Hagfishes - classification</subject><subject>Hagfishes - physiology</subject><subject>high-pressure adaptation</subject><subject>Humans</subject><subject>L-Lactate Dehydrogenase - chemistry</subject><subject>L-Lactate Dehydrogenase - metabolism</subject><subject>lactate dehydrogenase</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Muscle, Skeletal - enzymology</subject><subject>Myocardium - enzymology</subject><subject>Phylogeny</subject><subject>Pressure</subject><subject>Protein Structure, Tertiary</subject><subject>Review</subject><subject>Sequence Alignment</subject><subject>Temperature</subject><issn>1660-3397</issn><issn>1660-3397</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2010</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkU1LHTEUhkOxVKtd-AdkwEXp4rYnk49JQApF-iEIXeg-nMnHvXOZmWiSEfz3jb32os0m4eTh4eW8hJxS-MyYhi-TU8BAaP6GHFEpYVWn3cGL9yF5n_MWgAml-Tty2AKn9XRH5OKmpMWWJfkGZ9eEZbZliHMTQzOiLVh84_zm0aW49jNm34QUp2aD6zDkzQl5G3DM_sPzfUxuf3y_vfy1uv798-ry2_XKCinLitdkWltle01pH7TUvKOdd8CRiVYKF6gUWiLrOTiKXCoqNYQgdLAALTsmVzuti7g1d2mYMD2aiIP5O4hpbTCVwY7ecKFE60AJbD1HEarTKsqUUrSnVMnq-rpz3S395J31c0k4vpK-_pmHjVnHB9Mq0THBquDjsyDF-8XnYqYhWz-OOPu4ZNMx9hRfdZU8_4_cxiXNdVGGCiahAyFVpT7tKJtizsmHfRYK5qlds2-3smcvw-_Jf3WyP_rfnYU</recordid><startdate>20100315</startdate><enddate>20100315</enddate><creator>Nishiguchi, Yoshikazu</creator><creator>Ito, Nobue</creator><creator>Okada, Mitsumasa</creator><general>MDPI AG</general><general>Molecular Diversity Preservation International</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7T7</scope><scope>7TN</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H95</scope><scope>H99</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L.F</scope><scope>L.G</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PCBAR</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20100315</creationdate><title>Structure and function of lactate dehydrogenase from hagfish</title><author>Nishiguchi, Yoshikazu ; Ito, Nobue ; Okada, Mitsumasa</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c566t-459499c8cb911bf9694717ed04a35265df16596a3b40d1a4681690ff59fc0023</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2010</creationdate><topic>Adaptation, Physiological</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Enzyme Stability</topic><topic>evolutionary medicine</topic><topic>hagfish</topic><topic>Hagfishes - classification</topic><topic>Hagfishes - physiology</topic><topic>high-pressure adaptation</topic><topic>Humans</topic><topic>L-Lactate Dehydrogenase - chemistry</topic><topic>L-Lactate Dehydrogenase - metabolism</topic><topic>lactate dehydrogenase</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Muscle, Skeletal - enzymology</topic><topic>Myocardium - enzymology</topic><topic>Phylogeny</topic><topic>Pressure</topic><topic>Protein Structure, Tertiary</topic><topic>Review</topic><topic>Sequence Alignment</topic><topic>Temperature</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nishiguchi, Yoshikazu</creatorcontrib><creatorcontrib>Ito, Nobue</creatorcontrib><creatorcontrib>Okada, Mitsumasa</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Oceanic Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Earth, Atmospheric & Aquatic Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Earth, Atmospheric & Aquatic Science Database</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Marine drugs</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nishiguchi, Yoshikazu</au><au>Ito, Nobue</au><au>Okada, Mitsumasa</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Structure and function of lactate dehydrogenase from hagfish</atitle><jtitle>Marine drugs</jtitle><addtitle>Mar Drugs</addtitle><date>2010-03-15</date><risdate>2010</risdate><volume>8</volume><issue>3</issue><spage>594</spage><epage>607</epage><pages>594-607</pages><issn>1660-3397</issn><eissn>1660-3397</eissn><abstract>The lactate dehydrogenases (LDHs) in hagfish have been estimated to be the prototype of those in higher vertebrates. The effects of high hydrostatic pressure from 0.1 to 100 MPa on LDH activities from three hagfishes were examined. The LDH activities of Eptatretus burgeri, living at 45-60 m, were completely lost at 5 MPa. In contrast, LDH-A and -B in Eptatretus okinoseanus maintained 70% of their activities even at 100 MPa. These results show that the deeper the habitat, the higher the tolerance to pressure. To elucidate the molecular mechanisms for adaptation to high pressure, we compared the amino acid sequences and three-dimensional structures of LDHs in these hagfish. There were differences in six amino acids (6, 10, 20, 156, 269, and 341). These amino acidresidues are likely to contribute to the stability of the E. okinoseanus LDH under high-pressure conditions. The amino acids responsible for the pressure tolerance of hagfish are the same in both human and hagfish LDHs, and one substitution that occurred as an adaptation during evolution is coincident with that observed in a human disease. Mutation of these amino acids can cause anomalies that may be implicated in the development of human diseases.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>20411117</pmid><doi>10.3390/md8030594</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adaptation, Physiological Amino Acid Sequence Animals Enzyme Stability evolutionary medicine hagfish Hagfishes - classification Hagfishes - physiology high-pressure adaptation Humans L-Lactate Dehydrogenase - chemistry L-Lactate Dehydrogenase - metabolism lactate dehydrogenase Models, Molecular Molecular Sequence Data Muscle, Skeletal - enzymology Myocardium - enzymology Phylogeny Pressure Protein Structure, Tertiary Review Sequence Alignment Temperature |
title | Structure and function of lactate dehydrogenase from hagfish |
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