An improved automated diatom detection method based on YOLOv5 framework and its preliminary study for taxonomy recognition in the forensic diatom test

• Published in: Frontiers in microbiology 2022-08, Vol.13, p.963059
• Main Authors: Yu, Weimin, Xiang, Qingqing, Hu, Yingchao, Du, Yukun, Kang, Xiaodong, Zheng, Dongyun, Shi, He, Xu, Quyi, Li, Zhigang, Niu, Yong, Liu, Chao, Zhao, Jian
• Format: Article
• Language: English
• Subjects: artificial intelligence; diatom test; drowning; forensic science; Microbiology; microwave digestion-vacuum filtration-automated scanning electron microscopy; YOLOv5 framework
• ISSN: 1664-302X; 1664-302X
• DOI: 10.3389/fmicb.2022.963059

The diatom test is a forensic technique that can provide supportive evidence in the diagnosis of drowning but requires the laborious observation and counting of diatoms using a microscopy with too much effort, and therefore it is promising to introduce artificial intelligence (AI) to make the test process automatic. In this article, we propose an artificial intelligence solution based on the YOLOv5 framework for the automatic detection and recognition of the diatom genera. To evaluate the performance of this AI solution in different scenarios, we collected five lab-grown diatom genera and samples of some organic tissues from drowning cases to investigate the potential upper/lower limits of the capability in detecting the diatoms and recognizing their genera. Based on the study of the article, a recall score of 0.95 together with the corresponding precision score of 0.9 were achieved on the samples of the five lab-grown diatom genera cross-validation, and the accuracy of the evaluation in the cases of kidney and liver is above 0.85 based on the precision and recall scores, which demonstrate the effectiveness of the AI solution to be used in drowning forensic routine.