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TaqMan real-time PCR for detection of pathogenic Leptospira spp. in canine clinical samples
Canine leptospirosis has always been a differential diagnosis in dogs presenting with clinical signs and blood profiles associated with kidney and/or liver disease. The conventional polymerase chain reaction (PCR) provides diagnoses, but real-time PCR-based tests provide earlier confirmation and det...
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Published in: | Journal of veterinary research 2023-06, Vol.67 (2), p.187-195 |
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creator | Rahman, Mohammad Sabri Abdul Khor, Kuan Hua Khairani-Bejo, Siti Lau, Seng Fong Mazlan, Mazlina Roslan, Mohd Azri Ajat, Mohd Mokrish Md Noor, Mohd Akmal Mohd |
description | Canine leptospirosis has always been a differential diagnosis in dogs presenting with clinical signs and blood profiles associated with kidney and/or liver disease. The conventional polymerase chain reaction (PCR) provides diagnoses, but real-time PCR-based tests provide earlier confirmation and determine the severity of infection, especially in the acute stage, allowing early detection for immediate treatment decisions. To our knowledge, real-time PCR has not been routinely adopted for clinical investigation in Malaysia. This study evaluated TaqMan real-time PCR (qPCR) assays diagnosing leptospirosis and compared their applicability to clinical samples from dogs with kidney and/or liver disease against a conventional PCR reference.
The qPCR assays were validated using existing leptospiral isolates. Whole blood and urine samples were analysed using a conventional PCR,
and
qPCRs and a microscopic agglutination test. The sensitivity and specificity of the qPCRs were determined.
The
qPCR assay had more diagnostic value than the
qPCR assay. Further evaluation of this assay revealed that it could detect as low as five DNA copies per reaction with high specificity for the tested leptospiral strains. No cross-amplification was observed with other organisms. Analysing the clinical samples, the
qPCR assay had 100.0% sensitivity and >75.0% specificity.
The
qPCR assay is sensitive, specific and has the potential to be applied in future studies. |
doi_str_mv | 10.2478/jvetres-2023-0024 |
format | article |
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The qPCR assays were validated using existing leptospiral isolates. Whole blood and urine samples were analysed using a conventional PCR,
and
qPCRs and a microscopic agglutination test. The sensitivity and specificity of the qPCRs were determined.
The
qPCR assay had more diagnostic value than the
qPCR assay. Further evaluation of this assay revealed that it could detect as low as five DNA copies per reaction with high specificity for the tested leptospiral strains. No cross-amplification was observed with other organisms. Analysing the clinical samples, the
qPCR assay had 100.0% sensitivity and >75.0% specificity.
The
qPCR assay is sensitive, specific and has the potential to be applied in future studies.</description><identifier>ISSN: 2450-7393</identifier><identifier>ISSN: 2450-8608</identifier><identifier>EISSN: 2450-8608</identifier><identifier>DOI: 10.2478/jvetres-2023-0024</identifier><identifier>PMID: 38143826</identifier><language>eng</language><publisher>Poland: Sciendo</publisher><subject>Agglutination ; canine leptospirosis ; Differential diagnosis ; Kidneys ; Leptospirosis ; Liver diseases ; Polymerase chain reaction ; qPCR ; sensitivity ; Sensitivity analysis ; specificity</subject><ispartof>Journal of veterinary research, 2023-06, Vol.67 (2), p.187-195</ispartof><rights>2023 Mohammad Sabri Abdul Rahman et al., published by Sciendo.</rights><rights>2023. This work is published under http://creativecommons.org/licenses/by-nc-nd/3.0 (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c446t-a51a4508b0b1ea0beda540f372d57cef92edbf675be6fd3e1482046ba8e280813</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/2826660636?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,25753,27924,27925,37012,37013,44590</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38143826$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rahman, Mohammad Sabri Abdul</creatorcontrib><creatorcontrib>Khor, Kuan Hua</creatorcontrib><creatorcontrib>Khairani-Bejo, Siti</creatorcontrib><creatorcontrib>Lau, Seng Fong</creatorcontrib><creatorcontrib>Mazlan, Mazlina</creatorcontrib><creatorcontrib>Roslan, Mohd Azri</creatorcontrib><creatorcontrib>Ajat, Mohd Mokrish Md</creatorcontrib><creatorcontrib>Noor, Mohd Akmal Mohd</creatorcontrib><title>TaqMan real-time PCR for detection of pathogenic Leptospira spp. in canine clinical samples</title><title>Journal of veterinary research</title><addtitle>J Vet Res</addtitle><description>Canine leptospirosis has always been a differential diagnosis in dogs presenting with clinical signs and blood profiles associated with kidney and/or liver disease. The conventional polymerase chain reaction (PCR) provides diagnoses, but real-time PCR-based tests provide earlier confirmation and determine the severity of infection, especially in the acute stage, allowing early detection for immediate treatment decisions. To our knowledge, real-time PCR has not been routinely adopted for clinical investigation in Malaysia. This study evaluated TaqMan real-time PCR (qPCR) assays diagnosing leptospirosis and compared their applicability to clinical samples from dogs with kidney and/or liver disease against a conventional PCR reference.
The qPCR assays were validated using existing leptospiral isolates. Whole blood and urine samples were analysed using a conventional PCR,
and
qPCRs and a microscopic agglutination test. The sensitivity and specificity of the qPCRs were determined.
The
qPCR assay had more diagnostic value than the
qPCR assay. Further evaluation of this assay revealed that it could detect as low as five DNA copies per reaction with high specificity for the tested leptospiral strains. No cross-amplification was observed with other organisms. Analysing the clinical samples, the
qPCR assay had 100.0% sensitivity and >75.0% specificity.
The
qPCR assay is sensitive, specific and has the potential to be applied in future studies.</description><subject>Agglutination</subject><subject>canine leptospirosis</subject><subject>Differential diagnosis</subject><subject>Kidneys</subject><subject>Leptospirosis</subject><subject>Liver diseases</subject><subject>Polymerase chain reaction</subject><subject>qPCR</subject><subject>sensitivity</subject><subject>Sensitivity analysis</subject><subject>specificity</subject><issn>2450-7393</issn><issn>2450-8608</issn><issn>2450-8608</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNp1kU2L1TAUhosozjDOD3AjATduOuY76UrkMurAFUXGlYtwmpxec2mbTtIq8-_t9V5HEFzlEJ7z8CZvVT1n9IpLY1_vf-CcsdScclFTyuWj6pxLRWurqX18mo1oxFl1WcqeUsqMMA0TT6szYZkUluvz6tst3H2EkWSEvp7jgOTz5gvpUiYBZ_RzTCNJHZlg_p52OEZPtjjNqUwxAynTdEXiSDyMcUTi-7gC0JMCw9RjeVY96aAveHk6L6qv765vNx_q7af3N5u329pLqecaFIM1q21pyxBoiwGUpJ0wPCjjsWs4hrbTRrWouyCQScup1C1Y5JZaJi6qm6M3JNi7KccB8r1LEN3vi5R3DvIcfY9ONjKwVinKlFoVAbz3tulaqXxDAx5cr46uKae7Bcvshlg89j2MmJbieEOVsVxxs6Iv_0H3acnj-lLH17_VmmqhV4odKZ9TKRm7h4CMukOR7lSkOxTpDkWuOy9O5qUdMDxs_KltBd4cgZ_Qz5gD7vJyvw5_E_xXrg1n1ohfdnevBw</recordid><startdate>20230601</startdate><enddate>20230601</enddate><creator>Rahman, Mohammad Sabri Abdul</creator><creator>Khor, Kuan Hua</creator><creator>Khairani-Bejo, Siti</creator><creator>Lau, Seng Fong</creator><creator>Mazlan, Mazlina</creator><creator>Roslan, Mohd Azri</creator><creator>Ajat, Mohd Mokrish Md</creator><creator>Noor, Mohd Akmal Mohd</creator><general>Sciendo</general><general>De Gruyter Poland</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0S</scope><scope>M7P</scope><scope>NAPCQ</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>DOA</scope></search><sort><creationdate>20230601</creationdate><title>TaqMan real-time PCR for detection of pathogenic Leptospira spp. in canine clinical samples</title><author>Rahman, Mohammad Sabri Abdul ; 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The conventional polymerase chain reaction (PCR) provides diagnoses, but real-time PCR-based tests provide earlier confirmation and determine the severity of infection, especially in the acute stage, allowing early detection for immediate treatment decisions. To our knowledge, real-time PCR has not been routinely adopted for clinical investigation in Malaysia. This study evaluated TaqMan real-time PCR (qPCR) assays diagnosing leptospirosis and compared their applicability to clinical samples from dogs with kidney and/or liver disease against a conventional PCR reference.
The qPCR assays were validated using existing leptospiral isolates. Whole blood and urine samples were analysed using a conventional PCR,
and
qPCRs and a microscopic agglutination test. The sensitivity and specificity of the qPCRs were determined.
The
qPCR assay had more diagnostic value than the
qPCR assay. Further evaluation of this assay revealed that it could detect as low as five DNA copies per reaction with high specificity for the tested leptospiral strains. No cross-amplification was observed with other organisms. Analysing the clinical samples, the
qPCR assay had 100.0% sensitivity and >75.0% specificity.
The
qPCR assay is sensitive, specific and has the potential to be applied in future studies.</abstract><cop>Poland</cop><pub>Sciendo</pub><pmid>38143826</pmid><doi>10.2478/jvetres-2023-0024</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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source | PubMed (Medline); ProQuest - Publicly Available Content Database |
subjects | Agglutination canine leptospirosis Differential diagnosis Kidneys Leptospirosis Liver diseases Polymerase chain reaction qPCR sensitivity Sensitivity analysis specificity |
title | TaqMan real-time PCR for detection of pathogenic Leptospira spp. in canine clinical samples |
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