Loading…

Identification and Phylogenetic Analysis of Entomopathogenic Fungal Isolates Using Molecular Approach

Entomopathogenic fungi are essential to consider as one of the biological agents to control termite populations. This research aimed to molecularly identify entomopathogenic fungi isolates in termites based on the ITS rDNA region and to determine the relationship of fungi isolates. Identification wa...

Full description

Saved in:
Bibliographic Details
Published in:Elkawanie : journal of Islamic sciences and technology 2020-12, Vol.6 (2), p.359-366
Main Authors: Syaukani, Syaukani, Ananda, Zulia, Suhartono, Suhartono, Sirtina, Sirtina, Lisa, Oviana, Alfizar, Alfizar, Samingan, Samingan
Format: Article
Language:English
Subjects:
Citations: Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c150e-d6c0b4d75aec8957a8a749dd2a481af450ea83a1f7bba0d0c8bbd8853182bda3
cites
container_end_page 366
container_issue 2
container_start_page 359
container_title Elkawanie : journal of Islamic sciences and technology
container_volume 6
creator Syaukani, Syaukani
Ananda, Zulia
Suhartono, Suhartono
Sirtina, Sirtina
Lisa, Oviana
Alfizar, Alfizar
Samingan, Samingan
description Entomopathogenic fungi are essential to consider as one of the biological agents to control termite populations. This research aimed to molecularly identify entomopathogenic fungi isolates in termites based on the ITS rDNA region and to determine the relationship of fungi isolates. Identification was performed by DNA extraction, PCR amplification, electrophoresis, purification, and sequencing. Phylogenetic trees were generated using MEGA X.  Molecular identification showed that the ISO1 sample was Penicillium oxalicum, the ISO2 sample was Trichoderma ghanense the ISO3 sample was Aspergillus niger, the ISO4 sample was Aspergillus fumigatus and the ISO5 sample was Aspergillus pseudonomius. The phylogenetic tree showed that the ISO1, ISO2, ISO3, ISO4, and ISO5 samples had the closest relationship with Penicillium oxalicum strain FR6-CGR12, Trichoderma ghanense isolate TM2, Aspergillus niger isolate 77, Aspergillus fumigatus, and Aspergillus pseudonomius strain DTO 267D6, respectively.Abstrak: Kelimpahan jenis fungi entomopatogen adalah hal yang terpenting untuk dipertimbangkan sebagai agen hayati bagi populasi rayap.Penelitian ini bertujuan untuk mengidentifikasi secara molekular isolat fungi entomopatogen pada rayap, berdasarkan daerah ITS rDNA dan mengetahui hubungan kekerabatan dari isolat fungi tersebut. Identifikasi dilakukan dengan cara ekstraksi DNA, amplifikasi menggunakan PCR, elektroforesis, purifikasi dan sekuensing. Selanjutnya kontruksi pohon filogenetik menggunakan aplikasi MEGA X. Berdasarkan uji molekular menunjukkan bahwa sampel ISO1 merupakan Penicillium oxalicum.ISO2 merupakan Trichoderma ghanense.ISO3 merupakan Aspergillus niger. ISO4 merupakan Aspergillus fumigatus.ISO5 merupakan Aspergillus pseudonomius.Konstruksi pohon filogenetik menunjukkan bahwa, sampel ISO1 berkerabat dekat dengan Penicillium oxalicum strain FR6-CGR12. Sampel ISO2 berkerabat dekat dengan Trichoderma ghanense isolat TM2. Sampel ISO3 berkerabat dekat dengan Aspergillus nigerisolat 77. Sampel ISO4 berkerabat dekat dengan Aspergillus fumigatus.Sampel ISO5 berkerabat dekat dengan Aspergillus pseudonomius strain DTO 267D6.
doi_str_mv 10.22373/ekw.v6i2.6549
format article
fullrecord <record><control><sourceid>doaj_cross</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_498c11c4511f46d593fb12894eb46e2e</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_498c11c4511f46d593fb12894eb46e2e</doaj_id><sourcerecordid>oai_doaj_org_article_498c11c4511f46d593fb12894eb46e2e</sourcerecordid><originalsourceid>FETCH-LOGICAL-c150e-d6c0b4d75aec8957a8a749dd2a481af450ea83a1f7bba0d0c8bbd8853182bda3</originalsourceid><addsrcrecordid>eNpNkF1LwzAUhoMoOOZuvc4faE3StE0vx9i0MNGLeR1OPtpFs6Y0nbJ_bzdFvDqH8748cB6E7ilJGcvK7MF-fKWfhWNpkfPqCs0YL0giKkau_-23aBGjU4TzMsuLks2QrY3tRtc4DaMLHYbO4Nf9yYfWdnZ0Gi878KfoIg4NXndjOIQexv05nsLNsWvB4zoGD6ON-C26rsXPwVt99DDgZd8PAfT-Dt004KNd_M452m3Wu9VTsn15rFfLbaJpTmxiCk0UN2UOVosqL0FAyStjGHBBoeFTB0QGtCmVAmKIFkoZIfKMCqYMZHNU_2BNgHfZD-4Aw0kGcPJyCEMrYZie8lbySmhKNc8pbXhh8iprFGWi4lbxwjI7sdIflh5CjINt_niUyItyOSmXZ-XyrDz7BvHzd6E</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Identification and Phylogenetic Analysis of Entomopathogenic Fungal Isolates Using Molecular Approach</title><source>DOAJ Directory of Open Access Journals</source><creator>Syaukani, Syaukani ; Ananda, Zulia ; Suhartono, Suhartono ; Sirtina, Sirtina ; Lisa, Oviana ; Alfizar, Alfizar ; Samingan, Samingan</creator><creatorcontrib>Syaukani, Syaukani ; Ananda, Zulia ; Suhartono, Suhartono ; Sirtina, Sirtina ; Lisa, Oviana ; Alfizar, Alfizar ; Samingan, Samingan</creatorcontrib><description>Entomopathogenic fungi are essential to consider as one of the biological agents to control termite populations. This research aimed to molecularly identify entomopathogenic fungi isolates in termites based on the ITS rDNA region and to determine the relationship of fungi isolates. Identification was performed by DNA extraction, PCR amplification, electrophoresis, purification, and sequencing. Phylogenetic trees were generated using MEGA X.  Molecular identification showed that the ISO1 sample was Penicillium oxalicum, the ISO2 sample was Trichoderma ghanense the ISO3 sample was Aspergillus niger, the ISO4 sample was Aspergillus fumigatus and the ISO5 sample was Aspergillus pseudonomius. The phylogenetic tree showed that the ISO1, ISO2, ISO3, ISO4, and ISO5 samples had the closest relationship with Penicillium oxalicum strain FR6-CGR12, Trichoderma ghanense isolate TM2, Aspergillus niger isolate 77, Aspergillus fumigatus, and Aspergillus pseudonomius strain DTO 267D6, respectively.Abstrak: Kelimpahan jenis fungi entomopatogen adalah hal yang terpenting untuk dipertimbangkan sebagai agen hayati bagi populasi rayap.Penelitian ini bertujuan untuk mengidentifikasi secara molekular isolat fungi entomopatogen pada rayap, berdasarkan daerah ITS rDNA dan mengetahui hubungan kekerabatan dari isolat fungi tersebut. Identifikasi dilakukan dengan cara ekstraksi DNA, amplifikasi menggunakan PCR, elektroforesis, purifikasi dan sekuensing. Selanjutnya kontruksi pohon filogenetik menggunakan aplikasi MEGA X. Berdasarkan uji molekular menunjukkan bahwa sampel ISO1 merupakan Penicillium oxalicum.ISO2 merupakan Trichoderma ghanense.ISO3 merupakan Aspergillus niger. ISO4 merupakan Aspergillus fumigatus.ISO5 merupakan Aspergillus pseudonomius.Konstruksi pohon filogenetik menunjukkan bahwa, sampel ISO1 berkerabat dekat dengan Penicillium oxalicum strain FR6-CGR12. Sampel ISO2 berkerabat dekat dengan Trichoderma ghanense isolat TM2. Sampel ISO3 berkerabat dekat dengan Aspergillus nigerisolat 77. Sampel ISO4 berkerabat dekat dengan Aspergillus fumigatus.Sampel ISO5 berkerabat dekat dengan Aspergillus pseudonomius strain DTO 267D6.</description><identifier>ISSN: 2460-8920</identifier><identifier>EISSN: 2460-8920</identifier><identifier>DOI: 10.22373/ekw.v6i2.6549</identifier><language>eng</language><publisher>Faculty of Science and Technology Universitas Islam Negeri Ar-Raniry Banda Aceh</publisher><subject>entomopathogen ; molecular identification ; phylogenetic tree</subject><ispartof>Elkawanie : journal of Islamic sciences and technology, 2020-12, Vol.6 (2), p.359-366</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c150e-d6c0b4d75aec8957a8a749dd2a481af450ea83a1f7bba0d0c8bbd8853182bda3</citedby><orcidid>0000-0002-8117-3434</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,864,2102,27924,27925</link.rule.ids></links><search><creatorcontrib>Syaukani, Syaukani</creatorcontrib><creatorcontrib>Ananda, Zulia</creatorcontrib><creatorcontrib>Suhartono, Suhartono</creatorcontrib><creatorcontrib>Sirtina, Sirtina</creatorcontrib><creatorcontrib>Lisa, Oviana</creatorcontrib><creatorcontrib>Alfizar, Alfizar</creatorcontrib><creatorcontrib>Samingan, Samingan</creatorcontrib><title>Identification and Phylogenetic Analysis of Entomopathogenic Fungal Isolates Using Molecular Approach</title><title>Elkawanie : journal of Islamic sciences and technology</title><description>Entomopathogenic fungi are essential to consider as one of the biological agents to control termite populations. This research aimed to molecularly identify entomopathogenic fungi isolates in termites based on the ITS rDNA region and to determine the relationship of fungi isolates. Identification was performed by DNA extraction, PCR amplification, electrophoresis, purification, and sequencing. Phylogenetic trees were generated using MEGA X.  Molecular identification showed that the ISO1 sample was Penicillium oxalicum, the ISO2 sample was Trichoderma ghanense the ISO3 sample was Aspergillus niger, the ISO4 sample was Aspergillus fumigatus and the ISO5 sample was Aspergillus pseudonomius. The phylogenetic tree showed that the ISO1, ISO2, ISO3, ISO4, and ISO5 samples had the closest relationship with Penicillium oxalicum strain FR6-CGR12, Trichoderma ghanense isolate TM2, Aspergillus niger isolate 77, Aspergillus fumigatus, and Aspergillus pseudonomius strain DTO 267D6, respectively.Abstrak: Kelimpahan jenis fungi entomopatogen adalah hal yang terpenting untuk dipertimbangkan sebagai agen hayati bagi populasi rayap.Penelitian ini bertujuan untuk mengidentifikasi secara molekular isolat fungi entomopatogen pada rayap, berdasarkan daerah ITS rDNA dan mengetahui hubungan kekerabatan dari isolat fungi tersebut. Identifikasi dilakukan dengan cara ekstraksi DNA, amplifikasi menggunakan PCR, elektroforesis, purifikasi dan sekuensing. Selanjutnya kontruksi pohon filogenetik menggunakan aplikasi MEGA X. Berdasarkan uji molekular menunjukkan bahwa sampel ISO1 merupakan Penicillium oxalicum.ISO2 merupakan Trichoderma ghanense.ISO3 merupakan Aspergillus niger. ISO4 merupakan Aspergillus fumigatus.ISO5 merupakan Aspergillus pseudonomius.Konstruksi pohon filogenetik menunjukkan bahwa, sampel ISO1 berkerabat dekat dengan Penicillium oxalicum strain FR6-CGR12. Sampel ISO2 berkerabat dekat dengan Trichoderma ghanense isolat TM2. Sampel ISO3 berkerabat dekat dengan Aspergillus nigerisolat 77. Sampel ISO4 berkerabat dekat dengan Aspergillus fumigatus.Sampel ISO5 berkerabat dekat dengan Aspergillus pseudonomius strain DTO 267D6.</description><subject>entomopathogen</subject><subject>molecular identification</subject><subject>phylogenetic tree</subject><issn>2460-8920</issn><issn>2460-8920</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpNkF1LwzAUhoMoOOZuvc4faE3StE0vx9i0MNGLeR1OPtpFs6Y0nbJ_bzdFvDqH8748cB6E7ilJGcvK7MF-fKWfhWNpkfPqCs0YL0giKkau_-23aBGjU4TzMsuLks2QrY3tRtc4DaMLHYbO4Nf9yYfWdnZ0Gi878KfoIg4NXndjOIQexv05nsLNsWvB4zoGD6ON-C26rsXPwVt99DDgZd8PAfT-Dt004KNd_M452m3Wu9VTsn15rFfLbaJpTmxiCk0UN2UOVosqL0FAyStjGHBBoeFTB0QGtCmVAmKIFkoZIfKMCqYMZHNU_2BNgHfZD-4Aw0kGcPJyCEMrYZie8lbySmhKNc8pbXhh8iprFGWi4lbxwjI7sdIflh5CjINt_niUyItyOSmXZ-XyrDz7BvHzd6E</recordid><startdate>20201230</startdate><enddate>20201230</enddate><creator>Syaukani, Syaukani</creator><creator>Ananda, Zulia</creator><creator>Suhartono, Suhartono</creator><creator>Sirtina, Sirtina</creator><creator>Lisa, Oviana</creator><creator>Alfizar, Alfizar</creator><creator>Samingan, Samingan</creator><general>Faculty of Science and Technology Universitas Islam Negeri Ar-Raniry Banda Aceh</general><scope>AAYXX</scope><scope>CITATION</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-8117-3434</orcidid></search><sort><creationdate>20201230</creationdate><title>Identification and Phylogenetic Analysis of Entomopathogenic Fungal Isolates Using Molecular Approach</title><author>Syaukani, Syaukani ; Ananda, Zulia ; Suhartono, Suhartono ; Sirtina, Sirtina ; Lisa, Oviana ; Alfizar, Alfizar ; Samingan, Samingan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c150e-d6c0b4d75aec8957a8a749dd2a481af450ea83a1f7bba0d0c8bbd8853182bda3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>entomopathogen</topic><topic>molecular identification</topic><topic>phylogenetic tree</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Syaukani, Syaukani</creatorcontrib><creatorcontrib>Ananda, Zulia</creatorcontrib><creatorcontrib>Suhartono, Suhartono</creatorcontrib><creatorcontrib>Sirtina, Sirtina</creatorcontrib><creatorcontrib>Lisa, Oviana</creatorcontrib><creatorcontrib>Alfizar, Alfizar</creatorcontrib><creatorcontrib>Samingan, Samingan</creatorcontrib><collection>CrossRef</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Elkawanie : journal of Islamic sciences and technology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Syaukani, Syaukani</au><au>Ananda, Zulia</au><au>Suhartono, Suhartono</au><au>Sirtina, Sirtina</au><au>Lisa, Oviana</au><au>Alfizar, Alfizar</au><au>Samingan, Samingan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Identification and Phylogenetic Analysis of Entomopathogenic Fungal Isolates Using Molecular Approach</atitle><jtitle>Elkawanie : journal of Islamic sciences and technology</jtitle><date>2020-12-30</date><risdate>2020</risdate><volume>6</volume><issue>2</issue><spage>359</spage><epage>366</epage><pages>359-366</pages><issn>2460-8920</issn><eissn>2460-8920</eissn><abstract>Entomopathogenic fungi are essential to consider as one of the biological agents to control termite populations. This research aimed to molecularly identify entomopathogenic fungi isolates in termites based on the ITS rDNA region and to determine the relationship of fungi isolates. Identification was performed by DNA extraction, PCR amplification, electrophoresis, purification, and sequencing. Phylogenetic trees were generated using MEGA X.  Molecular identification showed that the ISO1 sample was Penicillium oxalicum, the ISO2 sample was Trichoderma ghanense the ISO3 sample was Aspergillus niger, the ISO4 sample was Aspergillus fumigatus and the ISO5 sample was Aspergillus pseudonomius. The phylogenetic tree showed that the ISO1, ISO2, ISO3, ISO4, and ISO5 samples had the closest relationship with Penicillium oxalicum strain FR6-CGR12, Trichoderma ghanense isolate TM2, Aspergillus niger isolate 77, Aspergillus fumigatus, and Aspergillus pseudonomius strain DTO 267D6, respectively.Abstrak: Kelimpahan jenis fungi entomopatogen adalah hal yang terpenting untuk dipertimbangkan sebagai agen hayati bagi populasi rayap.Penelitian ini bertujuan untuk mengidentifikasi secara molekular isolat fungi entomopatogen pada rayap, berdasarkan daerah ITS rDNA dan mengetahui hubungan kekerabatan dari isolat fungi tersebut. Identifikasi dilakukan dengan cara ekstraksi DNA, amplifikasi menggunakan PCR, elektroforesis, purifikasi dan sekuensing. Selanjutnya kontruksi pohon filogenetik menggunakan aplikasi MEGA X. Berdasarkan uji molekular menunjukkan bahwa sampel ISO1 merupakan Penicillium oxalicum.ISO2 merupakan Trichoderma ghanense.ISO3 merupakan Aspergillus niger. ISO4 merupakan Aspergillus fumigatus.ISO5 merupakan Aspergillus pseudonomius.Konstruksi pohon filogenetik menunjukkan bahwa, sampel ISO1 berkerabat dekat dengan Penicillium oxalicum strain FR6-CGR12. Sampel ISO2 berkerabat dekat dengan Trichoderma ghanense isolat TM2. Sampel ISO3 berkerabat dekat dengan Aspergillus nigerisolat 77. Sampel ISO4 berkerabat dekat dengan Aspergillus fumigatus.Sampel ISO5 berkerabat dekat dengan Aspergillus pseudonomius strain DTO 267D6.</abstract><pub>Faculty of Science and Technology Universitas Islam Negeri Ar-Raniry Banda Aceh</pub><doi>10.22373/ekw.v6i2.6549</doi><tpages>8</tpages><orcidid>https://orcid.org/0000-0002-8117-3434</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2460-8920
ispartof Elkawanie : journal of Islamic sciences and technology, 2020-12, Vol.6 (2), p.359-366
issn 2460-8920
2460-8920
language eng
recordid cdi_doaj_primary_oai_doaj_org_article_498c11c4511f46d593fb12894eb46e2e
source DOAJ Directory of Open Access Journals
subjects entomopathogen
molecular identification
phylogenetic tree
title Identification and Phylogenetic Analysis of Entomopathogenic Fungal Isolates Using Molecular Approach
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-06T18%3A51%3A20IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-doaj_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Identification%20and%20Phylogenetic%20Analysis%20of%20Entomopathogenic%20Fungal%20Isolates%20Using%20Molecular%20Approach&rft.jtitle=Elkawanie%20:%20journal%20of%20Islamic%20sciences%20and%20technology&rft.au=Syaukani,%20Syaukani&rft.date=2020-12-30&rft.volume=6&rft.issue=2&rft.spage=359&rft.epage=366&rft.pages=359-366&rft.issn=2460-8920&rft.eissn=2460-8920&rft_id=info:doi/10.22373/ekw.v6i2.6549&rft_dat=%3Cdoaj_cross%3Eoai_doaj_org_article_498c11c4511f46d593fb12894eb46e2e%3C/doaj_cross%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c150e-d6c0b4d75aec8957a8a749dd2a481af450ea83a1f7bba0d0c8bbd8853182bda3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_id=info:pmid/&rfr_iscdi=true