Phylogenetic Relationships of Russian Far-East Apis cerana with Other North Asian Populations

Fabricius, 1793 is the eastern honeybee species distributed throughout Asia from the tropical climate in the southern part to the temperate climate in the northern part. We sequenced and annotated the complete mitochondrial DNA (mtDNA) of from Vladivostok, Primorsky Krai of the Russian Far East and...

Full description

Saved in:
Bibliographic Details
Published in:Journal of Apicultural Science 2019-12, Vol.63 (2), p.289-314
Main Authors: Ilyasov, Rustem A., Youn, Han Gi, Lee, Myeong-lyeol, Kim, Kil Won, Proshchalykin, Maxim Y., Lelej, Arkady S., Takahashi, Jun-ichi, Kwon, Hyung Wook
Format: Article
Language:English
Subjects:
Apis cerana
apis cerana ussuriensis
ATP8 gene
Codons
Comparative analysis
Deoxyribonucleic acid
DNA
Genes
Mitochondrial DNA
mitochondrial genome
New subspecies
Nucleotide sequence
Phylogeny
rRNA
Russian Far East
tRNA
Vitellogenin
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c422t-255485746ff7ab9f24368f47e68c171a47900aea1141e25ac7f69e1e72111e9e3
cites cdi_FETCH-LOGICAL-c422t-255485746ff7ab9f24368f47e68c171a47900aea1141e25ac7f69e1e72111e9e3
container_end_page 314
container_issue 2
container_start_page 289
container_title Journal of Apicultural Science
container_volume 63
creator Ilyasov, Rustem A.
Youn, Han Gi
Lee, Myeong-lyeol
Kim, Kil Won
Proshchalykin, Maxim Y.
Lelej, Arkady S.
Takahashi, Jun-ichi
Kwon, Hyung Wook
description Fabricius, 1793 is the eastern honeybee species distributed throughout Asia from the tropical climate in the southern part to the temperate climate in the northern part. We sequenced and annotated the complete mitochondrial DNA (mtDNA) of from Vladivostok, Primorsky Krai of the Russian Far East and uploaded it to the database GenBank (AP018450). MtDNA sequence has 15,919 bp length, AT-content 84% and GC-content 16% and contains 22 tRNA genes, 13 protein-coding genes, two ribosomal RNA genes, one AT-rich region and four non-coding intergenic regions (NC1-4). All proteincoding genes start with ATT and ATG codons, except for ATC, the start codon of the ATP8 gene, which and stop with the common stop codons TAA and TAG. A comparative analysis of complete mtDNA of from China, Indonesia, Korea, Malaysia, Russia, Taiwan, Thailand, Vietnam, and Japan found that the Russian Far East differed from others on the subspecies level. Based on the comparative analysis of complete mtDNA (~16,000 bp), nuclear DNA (nDNA) gene Vitellogenin (VG) (~4,100 bp) and morphological measurements (six parameters), we assumed that the Russian Far-East can be a distinct northern Asia population and can be described as a separate unique subspecies of subsp. nov. subsp. nov. is also validated and described as a new subspecies.
doi_str_mv 10.2478/jas-2019-0024
format article
fullrecord <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_4ad0971167d14b5282fb74850e087b54</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_4ad0971167d14b5282fb74850e087b54</doaj_id><sourcerecordid>2330965642</sourcerecordid><originalsourceid>FETCH-LOGICAL-c422t-255485746ff7ab9f24368f47e68c171a47900aea1141e25ac7f69e1e72111e9e3</originalsourceid><addsrcrecordid>eNptkc9r2zAYhs1oYSXrcXfBzm6lz7J-sFMoSVcoayndcYgvzqfEwbM8ySbkv6_SlK2H6qIX8ej5JN6i-Cr4FUhtrneYSuDClpyD_FRcAFhbSlOJs3f5c3GZ0o7npYy0VX1R_H7cHrqwoZ7GtmFP1OHYhj5t2yGx4NnTlFKLPVtiLBeYRjYf2sQaitgj27fjlj2MW4rsZ4g5z1_ZxzBMb5ovxbnHLtHl2z4rfi0Xzzc_yvuH27ub-X3ZSICxhLqWptZSea9xZT3IShkvNSnTCC1Qass5EgohBUGNjfbKkiANQgiyVM2Ku5N3HXDnhtj-wXhwAVv3ehDixmHMH-zISVxzq4VQei3kqgYDfqXzdE7c6FUts-vbyTXE8HeiNLpdmGKfn--gqrhVtZKQqfJENTGkFMn_myq4OxbiciHuWIg7FpL57yd-j91IcU2bOB1y-C__8J6qAIytXgDIUI-i</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2330965642</pqid></control><display><type>article</type><title>Phylogenetic Relationships of Russian Far-East Apis cerana with Other North Asian Populations</title><source>Publicly Available Content (ProQuest)</source><source>EZB Electronic Journals Library</source><creator>Ilyasov, Rustem A. ; Youn, Han Gi ; Lee, Myeong-lyeol ; Kim, Kil Won ; Proshchalykin, Maxim Y. ; Lelej, Arkady S. ; Takahashi, Jun-ichi ; Kwon, Hyung Wook</creator><creatorcontrib>Ilyasov, Rustem A. ; Youn, Han Gi ; Lee, Myeong-lyeol ; Kim, Kil Won ; Proshchalykin, Maxim Y. ; Lelej, Arkady S. ; Takahashi, Jun-ichi ; Kwon, Hyung Wook</creatorcontrib><description>Fabricius, 1793 is the eastern honeybee species distributed throughout Asia from the tropical climate in the southern part to the temperate climate in the northern part. We sequenced and annotated the complete mitochondrial DNA (mtDNA) of from Vladivostok, Primorsky Krai of the Russian Far East and uploaded it to the database GenBank (AP018450). MtDNA sequence has 15,919 bp length, AT-content 84% and GC-content 16% and contains 22 tRNA genes, 13 protein-coding genes, two ribosomal RNA genes, one AT-rich region and four non-coding intergenic regions (NC1-4). All proteincoding genes start with ATT and ATG codons, except for ATC, the start codon of the ATP8 gene, which and stop with the common stop codons TAA and TAG. A comparative analysis of complete mtDNA of from China, Indonesia, Korea, Malaysia, Russia, Taiwan, Thailand, Vietnam, and Japan found that the Russian Far East differed from others on the subspecies level. Based on the comparative analysis of complete mtDNA (~16,000 bp), nuclear DNA (nDNA) gene Vitellogenin (VG) (~4,100 bp) and morphological measurements (six parameters), we assumed that the Russian Far-East can be a distinct northern Asia population and can be described as a separate unique subspecies of subsp. nov. subsp. nov. is also validated and described as a new subspecies.</description><identifier>ISSN: 2299-4831</identifier><identifier>ISSN: 1643-4439</identifier><identifier>EISSN: 2299-4831</identifier><identifier>DOI: 10.2478/jas-2019-0024</identifier><language>eng</language><publisher>Pulawy: Sciendo</publisher><subject>Apis cerana ; apis cerana ussuriensis ; ATP8 gene ; Codons ; Comparative analysis ; Deoxyribonucleic acid ; DNA ; Genes ; Mitochondrial DNA ; mitochondrial genome ; New subspecies ; Nucleotide sequence ; Phylogeny ; rRNA ; Russian Far East ; tRNA ; Vitellogenin</subject><ispartof>Journal of Apicultural Science, 2019-12, Vol.63 (2), p.289-314</ispartof><rights>2019. This work is published under http://creativecommons.org/licenses/by-nc-nd/4.0 (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c422t-255485746ff7ab9f24368f47e68c171a47900aea1141e25ac7f69e1e72111e9e3</citedby><cites>FETCH-LOGICAL-c422t-255485746ff7ab9f24368f47e68c171a47900aea1141e25ac7f69e1e72111e9e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/2330965642?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,25753,27924,27925,37012,44590</link.rule.ids></links><search><creatorcontrib>Ilyasov, Rustem A.</creatorcontrib><creatorcontrib>Youn, Han Gi</creatorcontrib><creatorcontrib>Lee, Myeong-lyeol</creatorcontrib><creatorcontrib>Kim, Kil Won</creatorcontrib><creatorcontrib>Proshchalykin, Maxim Y.</creatorcontrib><creatorcontrib>Lelej, Arkady S.</creatorcontrib><creatorcontrib>Takahashi, Jun-ichi</creatorcontrib><creatorcontrib>Kwon, Hyung Wook</creatorcontrib><title>Phylogenetic Relationships of Russian Far-East Apis cerana with Other North Asian Populations</title><title>Journal of Apicultural Science</title><description>Fabricius, 1793 is the eastern honeybee species distributed throughout Asia from the tropical climate in the southern part to the temperate climate in the northern part. We sequenced and annotated the complete mitochondrial DNA (mtDNA) of from Vladivostok, Primorsky Krai of the Russian Far East and uploaded it to the database GenBank (AP018450). MtDNA sequence has 15,919 bp length, AT-content 84% and GC-content 16% and contains 22 tRNA genes, 13 protein-coding genes, two ribosomal RNA genes, one AT-rich region and four non-coding intergenic regions (NC1-4). All proteincoding genes start with ATT and ATG codons, except for ATC, the start codon of the ATP8 gene, which and stop with the common stop codons TAA and TAG. A comparative analysis of complete mtDNA of from China, Indonesia, Korea, Malaysia, Russia, Taiwan, Thailand, Vietnam, and Japan found that the Russian Far East differed from others on the subspecies level. Based on the comparative analysis of complete mtDNA (~16,000 bp), nuclear DNA (nDNA) gene Vitellogenin (VG) (~4,100 bp) and morphological measurements (six parameters), we assumed that the Russian Far-East can be a distinct northern Asia population and can be described as a separate unique subspecies of subsp. nov. subsp. nov. is also validated and described as a new subspecies.</description><subject>Apis cerana</subject><subject>apis cerana ussuriensis</subject><subject>ATP8 gene</subject><subject>Codons</subject><subject>Comparative analysis</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>Genes</subject><subject>Mitochondrial DNA</subject><subject>mitochondrial genome</subject><subject>New subspecies</subject><subject>Nucleotide sequence</subject><subject>Phylogeny</subject><subject>rRNA</subject><subject>Russian Far East</subject><subject>tRNA</subject><subject>Vitellogenin</subject><issn>2299-4831</issn><issn>1643-4439</issn><issn>2299-4831</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptkc9r2zAYhs1oYSXrcXfBzm6lz7J-sFMoSVcoayndcYgvzqfEwbM8ySbkv6_SlK2H6qIX8ej5JN6i-Cr4FUhtrneYSuDClpyD_FRcAFhbSlOJs3f5c3GZ0o7npYy0VX1R_H7cHrqwoZ7GtmFP1OHYhj5t2yGx4NnTlFKLPVtiLBeYRjYf2sQaitgj27fjlj2MW4rsZ4g5z1_ZxzBMb5ovxbnHLtHl2z4rfi0Xzzc_yvuH27ub-X3ZSICxhLqWptZSea9xZT3IShkvNSnTCC1Qass5EgohBUGNjfbKkiANQgiyVM2Ku5N3HXDnhtj-wXhwAVv3ehDixmHMH-zISVxzq4VQei3kqgYDfqXzdE7c6FUts-vbyTXE8HeiNLpdmGKfn--gqrhVtZKQqfJENTGkFMn_myq4OxbiciHuWIg7FpL57yd-j91IcU2bOB1y-C__8J6qAIytXgDIUI-i</recordid><startdate>20191201</startdate><enddate>20191201</enddate><creator>Ilyasov, Rustem A.</creator><creator>Youn, Han Gi</creator><creator>Lee, Myeong-lyeol</creator><creator>Kim, Kil Won</creator><creator>Proshchalykin, Maxim Y.</creator><creator>Lelej, Arkady S.</creator><creator>Takahashi, Jun-ichi</creator><creator>Kwon, Hyung Wook</creator><general>Sciendo</general><general>De Gruyter Poland</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SS</scope><scope>7X2</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>HCIFZ</scope><scope>M0K</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>DOA</scope></search><sort><creationdate>20191201</creationdate><title>Phylogenetic Relationships of Russian Far-East Apis cerana with Other North Asian Populations</title><author>Ilyasov, Rustem A. ; Youn, Han Gi ; Lee, Myeong-lyeol ; Kim, Kil Won ; Proshchalykin, Maxim Y. ; Lelej, Arkady S. ; Takahashi, Jun-ichi ; Kwon, Hyung Wook</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c422t-255485746ff7ab9f24368f47e68c171a47900aea1141e25ac7f69e1e72111e9e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Apis cerana</topic><topic>apis cerana ussuriensis</topic><topic>ATP8 gene</topic><topic>Codons</topic><topic>Comparative analysis</topic><topic>Deoxyribonucleic acid</topic><topic>DNA</topic><topic>Genes</topic><topic>Mitochondrial DNA</topic><topic>mitochondrial genome</topic><topic>New subspecies</topic><topic>Nucleotide sequence</topic><topic>Phylogeny</topic><topic>rRNA</topic><topic>Russian Far East</topic><topic>tRNA</topic><topic>Vitellogenin</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ilyasov, Rustem A.</creatorcontrib><creatorcontrib>Youn, Han Gi</creatorcontrib><creatorcontrib>Lee, Myeong-lyeol</creatorcontrib><creatorcontrib>Kim, Kil Won</creatorcontrib><creatorcontrib>Proshchalykin, Maxim Y.</creatorcontrib><creatorcontrib>Lelej, Arkady S.</creatorcontrib><creatorcontrib>Takahashi, Jun-ichi</creatorcontrib><creatorcontrib>Kwon, Hyung Wook</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Agricultural Science Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>Agricultural &amp; Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>Agriculture Science Database</collection><collection>Publicly Available Content (ProQuest)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Journal of Apicultural Science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ilyasov, Rustem A.</au><au>Youn, Han Gi</au><au>Lee, Myeong-lyeol</au><au>Kim, Kil Won</au><au>Proshchalykin, Maxim Y.</au><au>Lelej, Arkady S.</au><au>Takahashi, Jun-ichi</au><au>Kwon, Hyung Wook</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogenetic Relationships of Russian Far-East Apis cerana with Other North Asian Populations</atitle><jtitle>Journal of Apicultural Science</jtitle><date>2019-12-01</date><risdate>2019</risdate><volume>63</volume><issue>2</issue><spage>289</spage><epage>314</epage><pages>289-314</pages><issn>2299-4831</issn><issn>1643-4439</issn><eissn>2299-4831</eissn><abstract>Fabricius, 1793 is the eastern honeybee species distributed throughout Asia from the tropical climate in the southern part to the temperate climate in the northern part. We sequenced and annotated the complete mitochondrial DNA (mtDNA) of from Vladivostok, Primorsky Krai of the Russian Far East and uploaded it to the database GenBank (AP018450). MtDNA sequence has 15,919 bp length, AT-content 84% and GC-content 16% and contains 22 tRNA genes, 13 protein-coding genes, two ribosomal RNA genes, one AT-rich region and four non-coding intergenic regions (NC1-4). All proteincoding genes start with ATT and ATG codons, except for ATC, the start codon of the ATP8 gene, which and stop with the common stop codons TAA and TAG. A comparative analysis of complete mtDNA of from China, Indonesia, Korea, Malaysia, Russia, Taiwan, Thailand, Vietnam, and Japan found that the Russian Far East differed from others on the subspecies level. Based on the comparative analysis of complete mtDNA (~16,000 bp), nuclear DNA (nDNA) gene Vitellogenin (VG) (~4,100 bp) and morphological measurements (six parameters), we assumed that the Russian Far-East can be a distinct northern Asia population and can be described as a separate unique subspecies of subsp. nov. subsp. nov. is also validated and described as a new subspecies.</abstract><cop>Pulawy</cop><pub>Sciendo</pub><doi>10.2478/jas-2019-0024</doi><tpages>26</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2299-4831
ispartof Journal of Apicultural Science, 2019-12, Vol.63 (2), p.289-314
issn 2299-4831
1643-4439
2299-4831
language eng
recordid cdi_doaj_primary_oai_doaj_org_article_4ad0971167d14b5282fb74850e087b54
source Publicly Available Content (ProQuest); EZB Electronic Journals Library
subjects Apis cerana
apis cerana ussuriensis
ATP8 gene
Codons
Comparative analysis
Deoxyribonucleic acid
DNA
Genes
Mitochondrial DNA
mitochondrial genome
New subspecies
Nucleotide sequence
Phylogeny
rRNA
Russian Far East
tRNA
Vitellogenin
title Phylogenetic Relationships of Russian Far-East Apis cerana with Other North Asian Populations
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-02T15%3A49%3A33IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Phylogenetic%20Relationships%20of%20Russian%20Far-East%20Apis%20cerana%20with%20Other%20North%20Asian%20Populations&rft.jtitle=Journal%20of%20Apicultural%20Science&rft.au=Ilyasov,%20Rustem%20A.&rft.date=2019-12-01&rft.volume=63&rft.issue=2&rft.spage=289&rft.epage=314&rft.pages=289-314&rft.issn=2299-4831&rft.eissn=2299-4831&rft_id=info:doi/10.2478/jas-2019-0024&rft_dat=%3Cproquest_doaj_%3E2330965642%3C/proquest_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c422t-255485746ff7ab9f24368f47e68c171a47900aea1141e25ac7f69e1e72111e9e3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2330965642&rft_id=info:pmid/&rfr_iscdi=true