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Single-cell transcriptomics identifies Keap1-Nrf2 regulated collective invasion in a Drosophila tumor model
Apicobasal cell polarity loss is a founding event in epithelial-mesenchymal transition and epithelial tumorigenesis, yet how pathological polarity loss links to plasticity remains largely unknown. To understand the mechanisms and mediators regulating plasticity upon polarity loss, we performed singl...
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description | Apicobasal cell polarity loss is a founding event in epithelial-mesenchymal transition and epithelial tumorigenesis, yet how pathological polarity loss links to plasticity remains largely unknown. To understand the mechanisms and mediators regulating plasticity upon polarity loss, we performed single-cell RNA sequencing of
ovaries, where inducing polarity-gene
-knockdown (Lgl-KD) causes invasive multilayering of the follicular epithelia. Analyzing the integrated Lgl-KD and
transcriptomes, we discovered the cells specific to the various discernible phenotypes and characterized the underlying gene expression. A genetic requirement of Keap1-Nrf2 signaling in promoting multilayer formation of Lgl-KD cells was further identified. Ectopic expression of Keap1 increased the volume of delaminated follicle cells that showed enhanced invasive behavior with significant changes to the cytoskeleton. Overall, our findings describe the comprehensive transcriptome of cells within the follicle cell tumor model at the single-cell resolution and identify a previously unappreciated link between Keap1-Nrf2 signaling and cell plasticity at early tumorigenesis. |
doi_str_mv | 10.7554/eLife.80956 |
format | article |
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ovaries, where inducing polarity-gene
-knockdown (Lgl-KD) causes invasive multilayering of the follicular epithelia. Analyzing the integrated Lgl-KD and
transcriptomes, we discovered the cells specific to the various discernible phenotypes and characterized the underlying gene expression. A genetic requirement of Keap1-Nrf2 signaling in promoting multilayer formation of Lgl-KD cells was further identified. Ectopic expression of Keap1 increased the volume of delaminated follicle cells that showed enhanced invasive behavior with significant changes to the cytoskeleton. Overall, our findings describe the comprehensive transcriptome of cells within the follicle cell tumor model at the single-cell resolution and identify a previously unappreciated link between Keap1-Nrf2 signaling and cell plasticity at early tumorigenesis.</description><identifier>ISSN: 2050-084X</identifier><identifier>EISSN: 2050-084X</identifier><identifier>DOI: 10.7554/eLife.80956</identifier><identifier>PMID: 36321803</identifier><language>eng</language><publisher>England: eLife Science Publications, Ltd</publisher><subject>Analysis ; Animals ; Cancer Biology ; Carcinogenesis ; Cell division ; cell polarity ; Cloning ; collective cell invasion ; Computational and Systems Biology ; Cytoskeleton ; Drosophila ; Drosophila - genetics ; Drosophila Proteins - metabolism ; Ectopic expression ; follicle cells ; Gene expression ; Genetic aspects ; Insects ; Keap1-Nrf2 ; Kelch-Like ECH-Associated Protein 1 - genetics ; Kelch-Like ECH-Associated Protein 1 - metabolism ; Mesenchyme ; Neoplasms ; NF-E2-Related Factor 2 - genetics ; NF-E2-Related Factor 2 - metabolism ; Ovaries ; Phenotypes ; Plasticity ; Polarity ; RNA sequencing ; scRNA-seq ; Stem cells ; Transcriptome ; Transcriptomes ; Transcriptomics ; Tumorigenesis ; Tumors</subject><ispartof>eLife, 2022-11, Vol.11</ispartof><rights>2022, Chatterjee et al.</rights><rights>COPYRIGHT 2022 eLife Science Publications, Ltd.</rights><rights>2022, Chatterjee et al. This work is published under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2022, Chatterjee et al 2022 Chatterjee et al</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c576t-22d7865d47c0dbf4a571b6194370718be2f50f94c3c9dc4789448af50a6516e23</citedby><cites>FETCH-LOGICAL-c576t-22d7865d47c0dbf4a571b6194370718be2f50f94c3c9dc4789448af50a6516e23</cites><orcidid>0000-0003-2752-4640 ; 0000-0002-9098-9769</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2743369715/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2743369715?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25752,27923,27924,37011,44589,53790,53792,74897</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36321803$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chatterjee, Deeptiman</creatorcontrib><creatorcontrib>Costa, Caique Almeida Machado</creatorcontrib><creatorcontrib>Wang, Xian-Feng</creatorcontrib><creatorcontrib>Jevitt, Allison</creatorcontrib><creatorcontrib>Huang, Yi-Chun</creatorcontrib><creatorcontrib>Deng, Wu-Min</creatorcontrib><title>Single-cell transcriptomics identifies Keap1-Nrf2 regulated collective invasion in a Drosophila tumor model</title><title>eLife</title><addtitle>Elife</addtitle><description>Apicobasal cell polarity loss is a founding event in epithelial-mesenchymal transition and epithelial tumorigenesis, yet how pathological polarity loss links to plasticity remains largely unknown. To understand the mechanisms and mediators regulating plasticity upon polarity loss, we performed single-cell RNA sequencing of
ovaries, where inducing polarity-gene
-knockdown (Lgl-KD) causes invasive multilayering of the follicular epithelia. Analyzing the integrated Lgl-KD and
transcriptomes, we discovered the cells specific to the various discernible phenotypes and characterized the underlying gene expression. A genetic requirement of Keap1-Nrf2 signaling in promoting multilayer formation of Lgl-KD cells was further identified. Ectopic expression of Keap1 increased the volume of delaminated follicle cells that showed enhanced invasive behavior with significant changes to the cytoskeleton. Overall, our findings describe the comprehensive transcriptome of cells within the follicle cell tumor model at the single-cell resolution and identify a previously unappreciated link between Keap1-Nrf2 signaling and cell plasticity at early tumorigenesis.</description><subject>Analysis</subject><subject>Animals</subject><subject>Cancer Biology</subject><subject>Carcinogenesis</subject><subject>Cell division</subject><subject>cell polarity</subject><subject>Cloning</subject><subject>collective cell invasion</subject><subject>Computational and Systems Biology</subject><subject>Cytoskeleton</subject><subject>Drosophila</subject><subject>Drosophila - genetics</subject><subject>Drosophila Proteins - metabolism</subject><subject>Ectopic expression</subject><subject>follicle cells</subject><subject>Gene expression</subject><subject>Genetic aspects</subject><subject>Insects</subject><subject>Keap1-Nrf2</subject><subject>Kelch-Like ECH-Associated Protein 1 - genetics</subject><subject>Kelch-Like ECH-Associated Protein 1 - metabolism</subject><subject>Mesenchyme</subject><subject>Neoplasms</subject><subject>NF-E2-Related Factor 2 - genetics</subject><subject>NF-E2-Related Factor 2 - metabolism</subject><subject>Ovaries</subject><subject>Phenotypes</subject><subject>Plasticity</subject><subject>Polarity</subject><subject>RNA sequencing</subject><subject>scRNA-seq</subject><subject>Stem cells</subject><subject>Transcriptome</subject><subject>Transcriptomes</subject><subject>Transcriptomics</subject><subject>Tumorigenesis</subject><subject>Tumors</subject><issn>2050-084X</issn><issn>2050-084X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptkt-L1DAQx4so3nHek-9S8Emka5ImTfoiHOevxUXBU_AtpMmklzVtekm76H9v3D3PWzB5yDDzmS-ZH0XxFKMVZ4y-go2zsBKoZc2D4pQghiok6PeH9-yT4jylLcqHUyFw-7g4qZuaYIHq0-LHlRt7D5UG78s5qjHp6KY5DE6n0hkYZ2cdpPIjqAlXn6IlZYR-8WoGU-rgPejZ7aB0404lF8ZslKp8E0MK07XzqpyXIcRyCAb8k-KRVT7B-e17Vnx79_br5Ydq8_n9-vJiU2nGm7kixHDRMEO5RqazVDGOuwa3tOaIY9EBsQzZlupat0ZTLlpKhco-1TDcAKnPivVB1wS1lVN0g4q_ZFBO7h0h9lLF2WkPkiFsWEcbDrqmSHcd6pjQSBFrMBihstbrg9a0dAMYnRsSlT8SPY6M7lr2YSdbjkRueBZ4fisQw80CaZbbsMQx1y9JDtdNyzH7R_Uq_8qNNmQxPbik5QUngtRZrsnU6j9UvgbyvMII1mX_UcKLo4TMzPBz7tWSklxffTlmXx5YnYeXIti7IjGSf3ZN7ndN7nct08_u9-WO_btZ9W_Kf87o</recordid><startdate>20221102</startdate><enddate>20221102</enddate><creator>Chatterjee, Deeptiman</creator><creator>Costa, Caique Almeida Machado</creator><creator>Wang, Xian-Feng</creator><creator>Jevitt, Allison</creator><creator>Huang, Yi-Chun</creator><creator>Deng, Wu-Min</creator><general>eLife Science Publications, Ltd</general><general>eLife Sciences Publications Ltd</general><general>eLife Sciences Publications, Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-2752-4640</orcidid><orcidid>https://orcid.org/0000-0002-9098-9769</orcidid></search><sort><creationdate>20221102</creationdate><title>Single-cell transcriptomics identifies Keap1-Nrf2 regulated collective invasion in a Drosophila tumor model</title><author>Chatterjee, Deeptiman ; Costa, Caique Almeida Machado ; Wang, Xian-Feng ; Jevitt, Allison ; Huang, Yi-Chun ; Deng, Wu-Min</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c576t-22d7865d47c0dbf4a571b6194370718be2f50f94c3c9dc4789448af50a6516e23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Analysis</topic><topic>Animals</topic><topic>Cancer Biology</topic><topic>Carcinogenesis</topic><topic>Cell division</topic><topic>cell polarity</topic><topic>Cloning</topic><topic>collective cell invasion</topic><topic>Computational and Systems Biology</topic><topic>Cytoskeleton</topic><topic>Drosophila</topic><topic>Drosophila - genetics</topic><topic>Drosophila Proteins - metabolism</topic><topic>Ectopic expression</topic><topic>follicle cells</topic><topic>Gene expression</topic><topic>Genetic aspects</topic><topic>Insects</topic><topic>Keap1-Nrf2</topic><topic>Kelch-Like ECH-Associated Protein 1 - genetics</topic><topic>Kelch-Like ECH-Associated Protein 1 - metabolism</topic><topic>Mesenchyme</topic><topic>Neoplasms</topic><topic>NF-E2-Related Factor 2 - genetics</topic><topic>NF-E2-Related Factor 2 - metabolism</topic><topic>Ovaries</topic><topic>Phenotypes</topic><topic>Plasticity</topic><topic>Polarity</topic><topic>RNA sequencing</topic><topic>scRNA-seq</topic><topic>Stem cells</topic><topic>Transcriptome</topic><topic>Transcriptomes</topic><topic>Transcriptomics</topic><topic>Tumorigenesis</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chatterjee, Deeptiman</creatorcontrib><creatorcontrib>Costa, Caique Almeida Machado</creatorcontrib><creatorcontrib>Wang, Xian-Feng</creatorcontrib><creatorcontrib>Jevitt, Allison</creatorcontrib><creatorcontrib>Huang, Yi-Chun</creatorcontrib><creatorcontrib>Deng, Wu-Min</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest_Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>eLife</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chatterjee, Deeptiman</au><au>Costa, Caique Almeida Machado</au><au>Wang, Xian-Feng</au><au>Jevitt, Allison</au><au>Huang, Yi-Chun</au><au>Deng, Wu-Min</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Single-cell transcriptomics identifies Keap1-Nrf2 regulated collective invasion in a Drosophila tumor model</atitle><jtitle>eLife</jtitle><addtitle>Elife</addtitle><date>2022-11-02</date><risdate>2022</risdate><volume>11</volume><issn>2050-084X</issn><eissn>2050-084X</eissn><abstract>Apicobasal cell polarity loss is a founding event in epithelial-mesenchymal transition and epithelial tumorigenesis, yet how pathological polarity loss links to plasticity remains largely unknown. To understand the mechanisms and mediators regulating plasticity upon polarity loss, we performed single-cell RNA sequencing of
ovaries, where inducing polarity-gene
-knockdown (Lgl-KD) causes invasive multilayering of the follicular epithelia. Analyzing the integrated Lgl-KD and
transcriptomes, we discovered the cells specific to the various discernible phenotypes and characterized the underlying gene expression. A genetic requirement of Keap1-Nrf2 signaling in promoting multilayer formation of Lgl-KD cells was further identified. Ectopic expression of Keap1 increased the volume of delaminated follicle cells that showed enhanced invasive behavior with significant changes to the cytoskeleton. Overall, our findings describe the comprehensive transcriptome of cells within the follicle cell tumor model at the single-cell resolution and identify a previously unappreciated link between Keap1-Nrf2 signaling and cell plasticity at early tumorigenesis.</abstract><cop>England</cop><pub>eLife Science Publications, Ltd</pub><pmid>36321803</pmid><doi>10.7554/eLife.80956</doi><orcidid>https://orcid.org/0000-0003-2752-4640</orcidid><orcidid>https://orcid.org/0000-0002-9098-9769</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Analysis Animals Cancer Biology Carcinogenesis Cell division cell polarity Cloning collective cell invasion Computational and Systems Biology Cytoskeleton Drosophila Drosophila - genetics Drosophila Proteins - metabolism Ectopic expression follicle cells Gene expression Genetic aspects Insects Keap1-Nrf2 Kelch-Like ECH-Associated Protein 1 - genetics Kelch-Like ECH-Associated Protein 1 - metabolism Mesenchyme Neoplasms NF-E2-Related Factor 2 - genetics NF-E2-Related Factor 2 - metabolism Ovaries Phenotypes Plasticity Polarity RNA sequencing scRNA-seq Stem cells Transcriptome Transcriptomes Transcriptomics Tumorigenesis Tumors |
title | Single-cell transcriptomics identifies Keap1-Nrf2 regulated collective invasion in a Drosophila tumor model |
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