Loading…

Characterisation of blaKPC-2–harbouring plasmids recovered from Pseudomonas aeruginosa ST654 and ST235 high-risk clones

•KPC-2 producing Pseudomonas aeruginosa high-risk clones ST235 and ST654•Non conjugative plasmids harbouring blaKPC-2•blaKPC-2 was located in Tn4401b in P. aeruginosa ST654•blaKPC-2 was located in a novel architecture in P. aeruginosa ST235 The main objectives were to describe two blaKPC-2 plasmids...

Full description

Saved in:
Bibliographic Details
Published in:Journal of global antimicrobial resistance. 2022-06, Vol.29, p.310-312
Main Authors: Cejas, Daniela, Elena, Alan, González-Espinosa, Francisco E, Pallecchi, Lucia, Vay, Carlos, Rossolini, Gian Maria, Gutkind, Gabriel, Di Pilato, Vincenzo, Radice, Marcela
Format: Article
Language:English
Subjects:
Citations: Items that this one cites
Items that cite this one
Online Access:Get full text
Tags: Add Tag
No Tags, Be the first to tag this record!
cited_by cdi_FETCH-LOGICAL-c3587-25b11784c8ec22acc6e8e7dc3423ea4a9bb4840143e1d55784fb25ff8aa5ee523
cites cdi_FETCH-LOGICAL-c3587-25b11784c8ec22acc6e8e7dc3423ea4a9bb4840143e1d55784fb25ff8aa5ee523
container_end_page 312
container_issue
container_start_page 310
container_title Journal of global antimicrobial resistance.
container_volume 29
creator Cejas, Daniela
Elena, Alan
González-Espinosa, Francisco E
Pallecchi, Lucia
Vay, Carlos
Rossolini, Gian Maria
Gutkind, Gabriel
Di Pilato, Vincenzo
Radice, Marcela
description •KPC-2 producing Pseudomonas aeruginosa high-risk clones ST235 and ST654•Non conjugative plasmids harbouring blaKPC-2•blaKPC-2 was located in Tn4401b in P. aeruginosa ST654•blaKPC-2 was located in a novel architecture in P. aeruginosa ST235 The main objectives were to describe two blaKPC-2 plasmids recovered from Pseudomonas aeruginosa isolates belonging to the ST654 and ST235 high-risk clones, and to compare with complete sequences of blaKPC-2 harbouring plasmids available in public databases. Antimicrobial susceptibility was determined according to CLSI (Clinical and Laboratory Standards Institute) guidelines. Genomes were sequenced using an Illumina MiSeq platform, and blaKPC-2 plasmid sequences were achieved using MinION platform. Sequences were analysed using Unicycler and RAST. In silico predictions of the isolates sequence type (ST), antimicrobial resistance genes, plasmid replicon typing and MOB relaxases were fulfilled using bioinformatics tools. PA_2047 and PA_HdC isolates corresponded to the high-risk clones ST654 and ST235, respectively. The carbapenem resistance was mediated by KPC-2. Both blaKPC-2 harbouring plasmids, pPA_2047 and pPA_HdC, were different among them, non-conjugative and untypable by PlasmidFinder. pPA_2047 presented high identity with a Pae-13 plasmid, and these both located blaKPC-2 in Tn4401b isoform. pPA_HdC displayed a novel architecture, and the genetic context of blaKPC-2 was original. Besides the blaKPC-2 gene, resistance genes to aminoglycosides and quinolones were detected, including the novel phosphotransferase CrpP in PA_HdC. This study expands the limited knowledge about the molecular epidemiology of blaKPC-2 in P. aeruginosa from Latin America. Two novel plasmids harbouring blaKPC-2 were described that were untypable by their incompatibility group. The plasmid recovered from P. aeruginosa PA_HdC (ST235) displayed a novel architecture and an original context for blaKPC-2. On the other hand, the genetic platform carrying blaKPC-2 in P. aeruginosa PA_2047 (ST654) seems to a be a classical one.
doi_str_mv 10.1016/j.jgar.2022.04.017
format article
fullrecord <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_50dd3d30d9364273a9c4522cc37b6a54</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S2213716522000959</els_id><doaj_id>oai_doaj_org_article_50dd3d30d9364273a9c4522cc37b6a54</doaj_id><sourcerecordid>2658229638</sourcerecordid><originalsourceid>FETCH-LOGICAL-c3587-25b11784c8ec22acc6e8e7dc3423ea4a9bb4840143e1d55784fb25ff8aa5ee523</originalsourceid><addsrcrecordid>eNp9UU2P1DAMrRBIrJb9A5xy5NKSOEk_JC5oBOyKlViJ5Ry5idtJaZshma60N_4D_5BfQoZBe8QXW_Z7z5ZfUbwWvBJc1G-nahoxVsABKq4qLppnxQWAkGUjGvn8qa71y-IqpYnn6JSAurkoHnd7jGiPFH3Cow8rCwPrZ_x8tyvh989fedqHLfp1ZIcZ0-JdYpFseKBIjg0xLOwu0ebCElZMDCluo19DQvb1vtaK4epyBVKzvR_3Zd7yndk5rJReFS8GnBNd_cuXxbePH-531-Xtl083u_e3pZW6bUrQvRBNq2xLFgCtramlxlmpQBIq7PpetYoLJUk4rTNy6EEPQ4uoiTTIy-LmrOsCTuYQ_YLx0QT05m8jxNFgPHo7k9HcOekkd52sFTQSO6s0gLWy6WvUKmu9OWsdYvixUTqaxSdL84wrhS0ZqHUL0NWyzVA4Q20MKUUanlYLbk62mcmcbDMn2wxXJtuWSe_OJMoPefAUTbKeVkvO56cf88X-f_Q_t2KhEA</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2658229638</pqid></control><display><type>article</type><title>Characterisation of blaKPC-2–harbouring plasmids recovered from Pseudomonas aeruginosa ST654 and ST235 high-risk clones</title><source>ScienceDirect Journals</source><source>Elsevier</source><creator>Cejas, Daniela ; Elena, Alan ; González-Espinosa, Francisco E ; Pallecchi, Lucia ; Vay, Carlos ; Rossolini, Gian Maria ; Gutkind, Gabriel ; Di Pilato, Vincenzo ; Radice, Marcela</creator><creatorcontrib>Cejas, Daniela ; Elena, Alan ; González-Espinosa, Francisco E ; Pallecchi, Lucia ; Vay, Carlos ; Rossolini, Gian Maria ; Gutkind, Gabriel ; Di Pilato, Vincenzo ; Radice, Marcela</creatorcontrib><description>•KPC-2 producing Pseudomonas aeruginosa high-risk clones ST235 and ST654•Non conjugative plasmids harbouring blaKPC-2•blaKPC-2 was located in Tn4401b in P. aeruginosa ST654•blaKPC-2 was located in a novel architecture in P. aeruginosa ST235 The main objectives were to describe two blaKPC-2 plasmids recovered from Pseudomonas aeruginosa isolates belonging to the ST654 and ST235 high-risk clones, and to compare with complete sequences of blaKPC-2 harbouring plasmids available in public databases. Antimicrobial susceptibility was determined according to CLSI (Clinical and Laboratory Standards Institute) guidelines. Genomes were sequenced using an Illumina MiSeq platform, and blaKPC-2 plasmid sequences were achieved using MinION platform. Sequences were analysed using Unicycler and RAST. In silico predictions of the isolates sequence type (ST), antimicrobial resistance genes, plasmid replicon typing and MOB relaxases were fulfilled using bioinformatics tools. PA_2047 and PA_HdC isolates corresponded to the high-risk clones ST654 and ST235, respectively. The carbapenem resistance was mediated by KPC-2. Both blaKPC-2 harbouring plasmids, pPA_2047 and pPA_HdC, were different among them, non-conjugative and untypable by PlasmidFinder. pPA_2047 presented high identity with a Pae-13 plasmid, and these both located blaKPC-2 in Tn4401b isoform. pPA_HdC displayed a novel architecture, and the genetic context of blaKPC-2 was original. Besides the blaKPC-2 gene, resistance genes to aminoglycosides and quinolones were detected, including the novel phosphotransferase CrpP in PA_HdC. This study expands the limited knowledge about the molecular epidemiology of blaKPC-2 in P. aeruginosa from Latin America. Two novel plasmids harbouring blaKPC-2 were described that were untypable by their incompatibility group. The plasmid recovered from P. aeruginosa PA_HdC (ST235) displayed a novel architecture and an original context for blaKPC-2. On the other hand, the genetic platform carrying blaKPC-2 in P. aeruginosa PA_2047 (ST654) seems to a be a classical one.</description><identifier>ISSN: 2213-7165</identifier><identifier>EISSN: 2213-7173</identifier><identifier>DOI: 10.1016/j.jgar.2022.04.017</identifier><language>eng</language><publisher>Elsevier Ltd</publisher><subject>blaKPC-2 ; Plasmids ; Pseudomonas aeruginosa ; ST235 ; ST654</subject><ispartof>Journal of global antimicrobial resistance., 2022-06, Vol.29, p.310-312</ispartof><rights>2022</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3587-25b11784c8ec22acc6e8e7dc3423ea4a9bb4840143e1d55784fb25ff8aa5ee523</citedby><cites>FETCH-LOGICAL-c3587-25b11784c8ec22acc6e8e7dc3423ea4a9bb4840143e1d55784fb25ff8aa5ee523</cites><orcidid>0000-0001-7418-3573 ; 0000-0002-5863-5805</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S2213716522000959$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,780,784,3549,27924,27925,45780</link.rule.ids></links><search><creatorcontrib>Cejas, Daniela</creatorcontrib><creatorcontrib>Elena, Alan</creatorcontrib><creatorcontrib>González-Espinosa, Francisco E</creatorcontrib><creatorcontrib>Pallecchi, Lucia</creatorcontrib><creatorcontrib>Vay, Carlos</creatorcontrib><creatorcontrib>Rossolini, Gian Maria</creatorcontrib><creatorcontrib>Gutkind, Gabriel</creatorcontrib><creatorcontrib>Di Pilato, Vincenzo</creatorcontrib><creatorcontrib>Radice, Marcela</creatorcontrib><title>Characterisation of blaKPC-2–harbouring plasmids recovered from Pseudomonas aeruginosa ST654 and ST235 high-risk clones</title><title>Journal of global antimicrobial resistance.</title><description>•KPC-2 producing Pseudomonas aeruginosa high-risk clones ST235 and ST654•Non conjugative plasmids harbouring blaKPC-2•blaKPC-2 was located in Tn4401b in P. aeruginosa ST654•blaKPC-2 was located in a novel architecture in P. aeruginosa ST235 The main objectives were to describe two blaKPC-2 plasmids recovered from Pseudomonas aeruginosa isolates belonging to the ST654 and ST235 high-risk clones, and to compare with complete sequences of blaKPC-2 harbouring plasmids available in public databases. Antimicrobial susceptibility was determined according to CLSI (Clinical and Laboratory Standards Institute) guidelines. Genomes were sequenced using an Illumina MiSeq platform, and blaKPC-2 plasmid sequences were achieved using MinION platform. Sequences were analysed using Unicycler and RAST. In silico predictions of the isolates sequence type (ST), antimicrobial resistance genes, plasmid replicon typing and MOB relaxases were fulfilled using bioinformatics tools. PA_2047 and PA_HdC isolates corresponded to the high-risk clones ST654 and ST235, respectively. The carbapenem resistance was mediated by KPC-2. Both blaKPC-2 harbouring plasmids, pPA_2047 and pPA_HdC, were different among them, non-conjugative and untypable by PlasmidFinder. pPA_2047 presented high identity with a Pae-13 plasmid, and these both located blaKPC-2 in Tn4401b isoform. pPA_HdC displayed a novel architecture, and the genetic context of blaKPC-2 was original. Besides the blaKPC-2 gene, resistance genes to aminoglycosides and quinolones were detected, including the novel phosphotransferase CrpP in PA_HdC. This study expands the limited knowledge about the molecular epidemiology of blaKPC-2 in P. aeruginosa from Latin America. Two novel plasmids harbouring blaKPC-2 were described that were untypable by their incompatibility group. The plasmid recovered from P. aeruginosa PA_HdC (ST235) displayed a novel architecture and an original context for blaKPC-2. On the other hand, the genetic platform carrying blaKPC-2 in P. aeruginosa PA_2047 (ST654) seems to a be a classical one.</description><subject>blaKPC-2</subject><subject>Plasmids</subject><subject>Pseudomonas aeruginosa</subject><subject>ST235</subject><subject>ST654</subject><issn>2213-7165</issn><issn>2213-7173</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNp9UU2P1DAMrRBIrJb9A5xy5NKSOEk_JC5oBOyKlViJ5Ry5idtJaZshma60N_4D_5BfQoZBe8QXW_Z7z5ZfUbwWvBJc1G-nahoxVsABKq4qLppnxQWAkGUjGvn8qa71y-IqpYnn6JSAurkoHnd7jGiPFH3Cow8rCwPrZ_x8tyvh989fedqHLfp1ZIcZ0-JdYpFseKBIjg0xLOwu0ebCElZMDCluo19DQvb1vtaK4epyBVKzvR_3Zd7yndk5rJReFS8GnBNd_cuXxbePH-531-Xtl083u_e3pZW6bUrQvRBNq2xLFgCtramlxlmpQBIq7PpetYoLJUk4rTNy6EEPQ4uoiTTIy-LmrOsCTuYQ_YLx0QT05m8jxNFgPHo7k9HcOekkd52sFTQSO6s0gLWy6WvUKmu9OWsdYvixUTqaxSdL84wrhS0ZqHUL0NWyzVA4Q20MKUUanlYLbk62mcmcbDMn2wxXJtuWSe_OJMoPefAUTbKeVkvO56cf88X-f_Q_t2KhEA</recordid><startdate>202206</startdate><enddate>202206</enddate><creator>Cejas, Daniela</creator><creator>Elena, Alan</creator><creator>González-Espinosa, Francisco E</creator><creator>Pallecchi, Lucia</creator><creator>Vay, Carlos</creator><creator>Rossolini, Gian Maria</creator><creator>Gutkind, Gabriel</creator><creator>Di Pilato, Vincenzo</creator><creator>Radice, Marcela</creator><general>Elsevier Ltd</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-7418-3573</orcidid><orcidid>https://orcid.org/0000-0002-5863-5805</orcidid></search><sort><creationdate>202206</creationdate><title>Characterisation of blaKPC-2–harbouring plasmids recovered from Pseudomonas aeruginosa ST654 and ST235 high-risk clones</title><author>Cejas, Daniela ; Elena, Alan ; González-Espinosa, Francisco E ; Pallecchi, Lucia ; Vay, Carlos ; Rossolini, Gian Maria ; Gutkind, Gabriel ; Di Pilato, Vincenzo ; Radice, Marcela</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3587-25b11784c8ec22acc6e8e7dc3423ea4a9bb4840143e1d55784fb25ff8aa5ee523</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>blaKPC-2</topic><topic>Plasmids</topic><topic>Pseudomonas aeruginosa</topic><topic>ST235</topic><topic>ST654</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Cejas, Daniela</creatorcontrib><creatorcontrib>Elena, Alan</creatorcontrib><creatorcontrib>González-Espinosa, Francisco E</creatorcontrib><creatorcontrib>Pallecchi, Lucia</creatorcontrib><creatorcontrib>Vay, Carlos</creatorcontrib><creatorcontrib>Rossolini, Gian Maria</creatorcontrib><creatorcontrib>Gutkind, Gabriel</creatorcontrib><creatorcontrib>Di Pilato, Vincenzo</creatorcontrib><creatorcontrib>Radice, Marcela</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Journal of global antimicrobial resistance.</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Cejas, Daniela</au><au>Elena, Alan</au><au>González-Espinosa, Francisco E</au><au>Pallecchi, Lucia</au><au>Vay, Carlos</au><au>Rossolini, Gian Maria</au><au>Gutkind, Gabriel</au><au>Di Pilato, Vincenzo</au><au>Radice, Marcela</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterisation of blaKPC-2–harbouring plasmids recovered from Pseudomonas aeruginosa ST654 and ST235 high-risk clones</atitle><jtitle>Journal of global antimicrobial resistance.</jtitle><date>2022-06</date><risdate>2022</risdate><volume>29</volume><spage>310</spage><epage>312</epage><pages>310-312</pages><issn>2213-7165</issn><eissn>2213-7173</eissn><abstract>•KPC-2 producing Pseudomonas aeruginosa high-risk clones ST235 and ST654•Non conjugative plasmids harbouring blaKPC-2•blaKPC-2 was located in Tn4401b in P. aeruginosa ST654•blaKPC-2 was located in a novel architecture in P. aeruginosa ST235 The main objectives were to describe two blaKPC-2 plasmids recovered from Pseudomonas aeruginosa isolates belonging to the ST654 and ST235 high-risk clones, and to compare with complete sequences of blaKPC-2 harbouring plasmids available in public databases. Antimicrobial susceptibility was determined according to CLSI (Clinical and Laboratory Standards Institute) guidelines. Genomes were sequenced using an Illumina MiSeq platform, and blaKPC-2 plasmid sequences were achieved using MinION platform. Sequences were analysed using Unicycler and RAST. In silico predictions of the isolates sequence type (ST), antimicrobial resistance genes, plasmid replicon typing and MOB relaxases were fulfilled using bioinformatics tools. PA_2047 and PA_HdC isolates corresponded to the high-risk clones ST654 and ST235, respectively. The carbapenem resistance was mediated by KPC-2. Both blaKPC-2 harbouring plasmids, pPA_2047 and pPA_HdC, were different among them, non-conjugative and untypable by PlasmidFinder. pPA_2047 presented high identity with a Pae-13 plasmid, and these both located blaKPC-2 in Tn4401b isoform. pPA_HdC displayed a novel architecture, and the genetic context of blaKPC-2 was original. Besides the blaKPC-2 gene, resistance genes to aminoglycosides and quinolones were detected, including the novel phosphotransferase CrpP in PA_HdC. This study expands the limited knowledge about the molecular epidemiology of blaKPC-2 in P. aeruginosa from Latin America. Two novel plasmids harbouring blaKPC-2 were described that were untypable by their incompatibility group. The plasmid recovered from P. aeruginosa PA_HdC (ST235) displayed a novel architecture and an original context for blaKPC-2. On the other hand, the genetic platform carrying blaKPC-2 in P. aeruginosa PA_2047 (ST654) seems to a be a classical one.</abstract><pub>Elsevier Ltd</pub><doi>10.1016/j.jgar.2022.04.017</doi><tpages>3</tpages><orcidid>https://orcid.org/0000-0001-7418-3573</orcidid><orcidid>https://orcid.org/0000-0002-5863-5805</orcidid><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 2213-7165
ispartof Journal of global antimicrobial resistance., 2022-06, Vol.29, p.310-312
issn 2213-7165
2213-7173
language eng
recordid cdi_doaj_primary_oai_doaj_org_article_50dd3d30d9364273a9c4522cc37b6a54
source ScienceDirect Journals; Elsevier
subjects blaKPC-2
Plasmids
Pseudomonas aeruginosa
ST235
ST654
title Characterisation of blaKPC-2–harbouring plasmids recovered from Pseudomonas aeruginosa ST654 and ST235 high-risk clones
url http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-01T16%3A50%3A08IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Characterisation%20of%20blaKPC-2%E2%80%93harbouring%20plasmids%20recovered%20from%20Pseudomonas%20aeruginosa%20ST654%20and%20ST235%20high-risk%20clones&rft.jtitle=Journal%20of%20global%20antimicrobial%20resistance.&rft.au=Cejas,%20Daniela&rft.date=2022-06&rft.volume=29&rft.spage=310&rft.epage=312&rft.pages=310-312&rft.issn=2213-7165&rft.eissn=2213-7173&rft_id=info:doi/10.1016/j.jgar.2022.04.017&rft_dat=%3Cproquest_doaj_%3E2658229638%3C/proquest_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c3587-25b11784c8ec22acc6e8e7dc3423ea4a9bb4840143e1d55784fb25ff8aa5ee523%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2658229638&rft_id=info:pmid/&rfr_iscdi=true