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Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers
Specialised anti-herbivory metabolites are abundant in the solanaceous genus . These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the genus, but information from the molecular model species , , and the tree...
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Published in: | Metabolites 2024-10, Vol.14 (10), p.562 |
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creator | Ebert, Alina Alseekh, Saleh D'Andrea, Lucio Roessner, Ute Bock, Ralph Kopka, Joachim |
description | Specialised anti-herbivory metabolites are abundant in the solanaceous genus
. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the
genus, but information from the molecular model species
,
, and the tree tobacco
is limited.
We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.
We analysed polar metabolite extracts in comparison to the previously investigated wild reference species
using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.
We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in
,
, and
to
. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.
We extend the number of known HGL-DTGs with a focus on
model species and demonstrate that the HGL-DTG family of
plants can be surprisingly complex. Our study provides an improved basis with detailed references to previous studies of wild
species and enables inference of HGL-DTG pathways with required enzymes for the biosynthesis of this important family of specialised defence metabolites. |
doi_str_mv | 10.3390/metabo14100562 |
format | article |
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. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the
genus, but information from the molecular model species
,
, and the tree tobacco
is limited.
We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.
We analysed polar metabolite extracts in comparison to the previously investigated wild reference species
using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.
We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in
,
, and
to
. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.
We extend the number of known HGL-DTGs with a focus on
model species and demonstrate that the HGL-DTG family of
plants can be surprisingly complex. Our study provides an improved basis with detailed references to previous studies of wild
species and enables inference of HGL-DTG pathways with required enzymes for the biosynthesis of this important family of specialised defence metabolites.</description><identifier>ISSN: 2218-1989</identifier><identifier>EISSN: 2218-1989</identifier><identifier>DOI: 10.3390/metabo14100562</identifier><identifier>PMID: 39452943</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Biosynthesis ; Composition ; diterpene glycosides ; Diterpenes ; fragmentation analysis ; Glucose ; Glycosides ; Health aspects ; Herbivory ; Humidity ; Identification and classification ; Isomers ; LC-MS ; Measurement ; Metabolism ; Metabolites ; MS/MS ; Nicotiana ; Nicotiana tabacum ; Nitrogen ; Physiological aspects ; plant specialised metabolism ; Species ; Tobacco ; Toxicity</subject><ispartof>Metabolites, 2024-10, Vol.14 (10), p.562</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 by the authors. 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c369t-ace284a39df5cf7b8b8eeca45828ec7621f5d59f3af2c0c9fa3bc8c8e14ae89d3</cites><orcidid>0000-0001-7502-6940 ; 0000-0002-6482-2615 ; 0009-0003-6195-3155 ; 0000-0001-9675-4883 ; 0000-0003-2067-5235 ; 0000-0001-6327-9975</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/3120743023/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/3120743023?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39452943$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ebert, Alina</creatorcontrib><creatorcontrib>Alseekh, Saleh</creatorcontrib><creatorcontrib>D'Andrea, Lucio</creatorcontrib><creatorcontrib>Roessner, Ute</creatorcontrib><creatorcontrib>Bock, Ralph</creatorcontrib><creatorcontrib>Kopka, Joachim</creatorcontrib><title>Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers</title><title>Metabolites</title><addtitle>Metabolites</addtitle><description>Specialised anti-herbivory metabolites are abundant in the solanaceous genus
. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the
genus, but information from the molecular model species
,
, and the tree tobacco
is limited.
We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.
We analysed polar metabolite extracts in comparison to the previously investigated wild reference species
using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.
We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in
,
, and
to
. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.
We extend the number of known HGL-DTGs with a focus on
model species and demonstrate that the HGL-DTG family of
plants can be surprisingly complex. Our study provides an improved basis with detailed references to previous studies of wild
species and enables inference of HGL-DTG pathways with required enzymes for the biosynthesis of this important family of specialised defence metabolites.</description><subject>Biosynthesis</subject><subject>Composition</subject><subject>diterpene glycosides</subject><subject>Diterpenes</subject><subject>fragmentation analysis</subject><subject>Glucose</subject><subject>Glycosides</subject><subject>Health aspects</subject><subject>Herbivory</subject><subject>Humidity</subject><subject>Identification and classification</subject><subject>Isomers</subject><subject>LC-MS</subject><subject>Measurement</subject><subject>Metabolism</subject><subject>Metabolites</subject><subject>MS/MS</subject><subject>Nicotiana</subject><subject>Nicotiana tabacum</subject><subject>Nitrogen</subject><subject>Physiological aspects</subject><subject>plant specialised metabolism</subject><subject>Species</subject><subject>Tobacco</subject><subject>Toxicity</subject><issn>2218-1989</issn><issn>2218-1989</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdUk1v1DAQjRCIVqVXjigSFy4p_kpin1C1hXalqiA-ztbEGQcvTrzY2dL9H_xg3G4pXWzJY8-8eePRm6J4SckJ54q8HXGGLlBBCakb9qQ4ZIzKiiqpnj66HxTHKa1IXg2pW0KfFwdciZopwQ-L32eZw3nsy08xWOfdNJTBlrStLrZ9DDfbASNMW58D4EPw5ZmbMa5xwvLcb01IrsdU2hjG8sqZMDuYoPyyRuOy-zNeI_hULsK49niT32BmF6byCudfIf5It6UWYVptBrjzL1MYMaYXxTOb8_D43h4V3z68_7q4qC4_ni8Xp5eV4Y2aKzDIpACuelsb23ayk4gGRC2ZRNM2jNq6r5XlYJkhRlngnZFGIhWAUvX8qFjuePsAK72OboS41QGcvnOEOGiIszMeda2YpG0rBVVMtD0ByvJpRdMDqztCMte7Hdd6043YG5zmCH6PdD8yue96CNea0pooRmRmeHPPEMPPDaZZjy4Z9B4mDJukOWVZQUpFk6Gv_4OuwiZmhXaoVnDCeEad7FAD5A7cZEMubPLuccxaTZj1Rn0qqRCENrT9l2BiSCmiffg-Jfp24vT-xOWEV4-bfoD_nS_-B_zO1VM</recordid><startdate>20241020</startdate><enddate>20241020</enddate><creator>Ebert, Alina</creator><creator>Alseekh, Saleh</creator><creator>D'Andrea, Lucio</creator><creator>Roessner, Ute</creator><creator>Bock, Ralph</creator><creator>Kopka, Joachim</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QR</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-7502-6940</orcidid><orcidid>https://orcid.org/0000-0002-6482-2615</orcidid><orcidid>https://orcid.org/0009-0003-6195-3155</orcidid><orcidid>https://orcid.org/0000-0001-9675-4883</orcidid><orcidid>https://orcid.org/0000-0003-2067-5235</orcidid><orcidid>https://orcid.org/0000-0001-6327-9975</orcidid></search><sort><creationdate>20241020</creationdate><title>Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers</title><author>Ebert, Alina ; Alseekh, Saleh ; D'Andrea, Lucio ; Roessner, Ute ; Bock, Ralph ; Kopka, Joachim</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c369t-ace284a39df5cf7b8b8eeca45828ec7621f5d59f3af2c0c9fa3bc8c8e14ae89d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Biosynthesis</topic><topic>Composition</topic><topic>diterpene glycosides</topic><topic>Diterpenes</topic><topic>fragmentation analysis</topic><topic>Glucose</topic><topic>Glycosides</topic><topic>Health aspects</topic><topic>Herbivory</topic><topic>Humidity</topic><topic>Identification and classification</topic><topic>Isomers</topic><topic>LC-MS</topic><topic>Measurement</topic><topic>Metabolism</topic><topic>Metabolites</topic><topic>MS/MS</topic><topic>Nicotiana</topic><topic>Nicotiana tabacum</topic><topic>Nitrogen</topic><topic>Physiological aspects</topic><topic>plant specialised metabolism</topic><topic>Species</topic><topic>Tobacco</topic><topic>Toxicity</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ebert, Alina</creatorcontrib><creatorcontrib>Alseekh, Saleh</creatorcontrib><creatorcontrib>D'Andrea, Lucio</creatorcontrib><creatorcontrib>Roessner, Ute</creatorcontrib><creatorcontrib>Bock, Ralph</creatorcontrib><creatorcontrib>Kopka, Joachim</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Chemoreception Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>AUTh Library subscriptions: ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest Biological Science Collection</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest - Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Metabolites</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ebert, Alina</au><au>Alseekh, Saleh</au><au>D'Andrea, Lucio</au><au>Roessner, Ute</au><au>Bock, Ralph</au><au>Kopka, Joachim</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers</atitle><jtitle>Metabolites</jtitle><addtitle>Metabolites</addtitle><date>2024-10-20</date><risdate>2024</risdate><volume>14</volume><issue>10</issue><spage>562</spage><pages>562-</pages><issn>2218-1989</issn><eissn>2218-1989</eissn><abstract>Specialised anti-herbivory metabolites are abundant in the solanaceous genus
. These metabolites include the large family of 17-hydroxygeranyllinalool diterpene glycosides (HGL-DTGs). Many HGL-DTGs occur exclusively within the
genus, but information from the molecular model species
,
, and the tree tobacco
is limited.
We studied HGL-DTG occurrence and complexity in these species with the aim of providing in-depth reference annotations and comprehensive HGL-DTG inventories.
We analysed polar metabolite extracts in comparison to the previously investigated wild reference species
using positive ESI(+) and negative ESI(-) mode electrospray ionisation LC-MS and MS/MS.
We provide annotations of 66 HGL-DTGs with in-source and MS/MS fragmentation spectra for selected HGL-DTGs with exemplary fragment interpretations of ESI(+) as well as less studied ESI(-) spectra. We assemble a potential biosynthesis pathway comparing the presence of HGL-DTGs in
,
, and
to
. Approximately one-third of HGL-DTGs are chromatographically resolved isomers of hexose, deoxyhexose, or malonate conjugates. The number of isomers is especially high for conjugates with low numbers of deoxyhexose moieties.
We extend the number of known HGL-DTGs with a focus on
model species and demonstrate that the HGL-DTG family of
plants can be surprisingly complex. Our study provides an improved basis with detailed references to previous studies of wild
species and enables inference of HGL-DTG pathways with required enzymes for the biosynthesis of this important family of specialised defence metabolites.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>39452943</pmid><doi>10.3390/metabo14100562</doi><orcidid>https://orcid.org/0000-0001-7502-6940</orcidid><orcidid>https://orcid.org/0000-0002-6482-2615</orcidid><orcidid>https://orcid.org/0009-0003-6195-3155</orcidid><orcidid>https://orcid.org/0000-0001-9675-4883</orcidid><orcidid>https://orcid.org/0000-0003-2067-5235</orcidid><orcidid>https://orcid.org/0000-0001-6327-9975</orcidid><oa>free_for_read</oa></addata></record> |
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source | PubMed (Medline); ProQuest - Publicly Available Content Database |
subjects | Biosynthesis Composition diterpene glycosides Diterpenes fragmentation analysis Glucose Glycosides Health aspects Herbivory Humidity Identification and classification Isomers LC-MS Measurement Metabolism Metabolites MS/MS Nicotiana Nicotiana tabacum Nitrogen Physiological aspects plant specialised metabolism Species Tobacco Toxicity |
title | Detailed Profiling of 17-Hydroxygeranyllinalool Diterpene Glycosides from Nicotiana Species Reveals Complex Reaction Networks of Conjugation Isomers |
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