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The HOMO-LUMO Gap as Discriminator of Biotic from Abiotic Chemistries
Low-molecular-mass organic chemicals are widely discussed as potential indicators of life in extraterrestrial habitats. However, demarcation lines between biotic chemicals and abiotic chemicals have been difficult to define. Here, we have analyzed the potential utility of the quantum chemical proper...
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Published in: | Life (Basel, Switzerland) Switzerland), 2024-10, Vol.14 (10), p.1330 |
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description | Low-molecular-mass organic chemicals are widely discussed as potential indicators of life in extraterrestrial habitats. However, demarcation lines between biotic chemicals and abiotic chemicals have been difficult to define. Here, we have analyzed the potential utility of the quantum chemical property, HOMO-LUMO gap (HLG), as a novel proxy variable of life, since a significant trend towards incrementally smaller HLGs has been described in the genetically encoded amino acids. The HLG is a zeroth-order predictor of chemical reactivity. Comparing a set of 134 abiotic organic molecules recovered from meteorites, with 570 microbial and plant secondary metabolites thought to be exclusively biotic, we found that the average HLG of biotic molecules was significantly narrower (-10.4 ± 0.9 eV versus -12.4 ± 1.6 eV), with an effect size of g = 1.87. Limitation to hydrophilic molecules (XlogP < 2) improved the separation of biotic from abiotic compounds (g = 2.52). The "hydrophilic reactivity" quadrant defined by |HLG| < 11.25 eV and XlogP < 2 was populated exclusively by 183 biotic compounds and 6 abiotic compounds, 5 of which were nucleobases. We conclude that hydrophilic molecules with small HLGs represent valuable indicators of biotic activity, and we discuss the evolutionary plausibility of this inference. |
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However, demarcation lines between biotic chemicals and abiotic chemicals have been difficult to define. Here, we have analyzed the potential utility of the quantum chemical property, HOMO-LUMO gap (HLG), as a novel proxy variable of life, since a significant trend towards incrementally smaller HLGs has been described in the genetically encoded amino acids. The HLG is a zeroth-order predictor of chemical reactivity. Comparing a set of 134 abiotic organic molecules recovered from meteorites, with 570 microbial and plant secondary metabolites thought to be exclusively biotic, we found that the average HLG of biotic molecules was significantly narrower (-10.4 ± 0.9 eV versus -12.4 ± 1.6 eV), with an effect size of g = 1.87. Limitation to hydrophilic molecules (XlogP < 2) improved the separation of biotic from abiotic compounds (g = 2.52). The "hydrophilic reactivity" quadrant defined by |HLG| < 11.25 eV and XlogP < 2 was populated exclusively by 183 biotic compounds and 6 abiotic compounds, 5 of which were nucleobases. We conclude that hydrophilic molecules with small HLGs represent valuable indicators of biotic activity, and we discuss the evolutionary plausibility of this inference.</description><identifier>ISSN: 2075-1729</identifier><identifier>EISSN: 2075-1729</identifier><identifier>DOI: 10.3390/life14101330</identifier><identifier>PMID: 39459630</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>abiogenesis ; Amino acids ; Analysis ; Bases (nucleic acids) ; biosignature ; Brief Report ; Chemical properties ; Chemical reactions ; Chemicals ; Extraterrestrial life ; frontier orbital ; Genetic code ; Hydrophilicity ; Indicators ; life detection ; Life on other planets ; Metabolism ; Metabolites ; Meteorites ; Meteors & meteorites ; Microorganisms ; molecular evolution ; Molecular orbitals ; Organic chemicals ; Organic chemistry ; Plant metabolites ; Polymers ; Quantum chemistry ; Secondary metabolites ; Software</subject><ispartof>Life (Basel, Switzerland), 2024-10, Vol.14 (10), p.1330</ispartof><rights>COPYRIGHT 2024 MDPI AG</rights><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2024 by the authors. 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c467t-490b246788999804245d207861fe47dfb30174ca45350af08085a4e4784b76883</cites><orcidid>0000-0002-7703-7712 ; 0009-0009-2081-1170</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/3120677349/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/3120677349?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39459630$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Abrosimov, Roman</creatorcontrib><creatorcontrib>Moosmann, Bernd</creatorcontrib><title>The HOMO-LUMO Gap as Discriminator of Biotic from Abiotic Chemistries</title><title>Life (Basel, Switzerland)</title><addtitle>Life (Basel)</addtitle><description>Low-molecular-mass organic chemicals are widely discussed as potential indicators of life in extraterrestrial habitats. However, demarcation lines between biotic chemicals and abiotic chemicals have been difficult to define. Here, we have analyzed the potential utility of the quantum chemical property, HOMO-LUMO gap (HLG), as a novel proxy variable of life, since a significant trend towards incrementally smaller HLGs has been described in the genetically encoded amino acids. The HLG is a zeroth-order predictor of chemical reactivity. Comparing a set of 134 abiotic organic molecules recovered from meteorites, with 570 microbial and plant secondary metabolites thought to be exclusively biotic, we found that the average HLG of biotic molecules was significantly narrower (-10.4 ± 0.9 eV versus -12.4 ± 1.6 eV), with an effect size of g = 1.87. Limitation to hydrophilic molecules (XlogP < 2) improved the separation of biotic from abiotic compounds (g = 2.52). The "hydrophilic reactivity" quadrant defined by |HLG| < 11.25 eV and XlogP < 2 was populated exclusively by 183 biotic compounds and 6 abiotic compounds, 5 of which were nucleobases. We conclude that hydrophilic molecules with small HLGs represent valuable indicators of biotic activity, and we discuss the evolutionary plausibility of this inference.</description><subject>abiogenesis</subject><subject>Amino acids</subject><subject>Analysis</subject><subject>Bases (nucleic acids)</subject><subject>biosignature</subject><subject>Brief Report</subject><subject>Chemical properties</subject><subject>Chemical reactions</subject><subject>Chemicals</subject><subject>Extraterrestrial life</subject><subject>frontier orbital</subject><subject>Genetic code</subject><subject>Hydrophilicity</subject><subject>Indicators</subject><subject>life detection</subject><subject>Life on other planets</subject><subject>Metabolism</subject><subject>Metabolites</subject><subject>Meteorites</subject><subject>Meteors & meteorites</subject><subject>Microorganisms</subject><subject>molecular evolution</subject><subject>Molecular orbitals</subject><subject>Organic chemicals</subject><subject>Organic chemistry</subject><subject>Plant metabolites</subject><subject>Polymers</subject><subject>Quantum chemistry</subject><subject>Secondary metabolites</subject><subject>Software</subject><issn>2075-1729</issn><issn>2075-1729</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNptkktvEzEUhUcIRKvSHWs0EhuQmmKP3ysU0tJGShUJ2rXl8diJo8k42DMI_j03pJQMwl749d3j6-NbFK8xuiREoQ9t8A5TjDAh6FlxWiHBJlhU6vnR_KQ4z3mDoHGGuaQvixOiKFOcoNPi-n7tytvl3XKyeLhbljdmV5pcXoVsU9iGzvQxldGXn0Lsgy19ittyWh8Ws7Xbhtyn4PKr4oU3bXbnj-NZ8fD5-n52O1ksb-az6WJiKRf9hCpUVzCTUiklEa0oayBNybF3VDS-JggLag1lhCHjkUSSGQpHktaCS0nOivlBt4lmo3eQokk_dTRB_96IaaVNgtxap5lnTnruqbACohtT8RpjoQxxWPLKgtbHg9ZuqLeusa7rk2lHouOTLqz1Kn7XGDOkOOKg8O5RIcVvg8u9Bj-sa1vTuThkTXCFEa9UhQF9-w-6iUPqwKs9hbgQhKq_1MrAC0LnI1xs96J6KjEl4JrYU5f_oaA38B82ds4H2B8FvB8FANO7H_3KDDnr-dcvY_biwNoUc07OPxmCkd6XnD4uOcDfHJv4BP8pMPILX3_LEQ</recordid><startdate>20241001</startdate><enddate>20241001</enddate><creator>Abrosimov, Roman</creator><creator>Moosmann, Bernd</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PYCSY</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-7703-7712</orcidid><orcidid>https://orcid.org/0009-0009-2081-1170</orcidid></search><sort><creationdate>20241001</creationdate><title>The HOMO-LUMO Gap as Discriminator of Biotic from Abiotic Chemistries</title><author>Abrosimov, Roman ; 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The "hydrophilic reactivity" quadrant defined by |HLG| < 11.25 eV and XlogP < 2 was populated exclusively by 183 biotic compounds and 6 abiotic compounds, 5 of which were nucleobases. We conclude that hydrophilic molecules with small HLGs represent valuable indicators of biotic activity, and we discuss the evolutionary plausibility of this inference.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>39459630</pmid><doi>10.3390/life14101330</doi><orcidid>https://orcid.org/0000-0002-7703-7712</orcidid><orcidid>https://orcid.org/0009-0009-2081-1170</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | abiogenesis Amino acids Analysis Bases (nucleic acids) biosignature Brief Report Chemical properties Chemical reactions Chemicals Extraterrestrial life frontier orbital Genetic code Hydrophilicity Indicators life detection Life on other planets Metabolism Metabolites Meteorites Meteors & meteorites Microorganisms molecular evolution Molecular orbitals Organic chemicals Organic chemistry Plant metabolites Polymers Quantum chemistry Secondary metabolites Software |
title | The HOMO-LUMO Gap as Discriminator of Biotic from Abiotic Chemistries |
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