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Defective Interferon Gamma Production by Tumor-Specific CD8+ T Cells Is Associated With 5′Methylcytosine-Guanine Hypermethylation of Interferon Gamma Promoter
Interferon gamma (IFNγ) supports effector responses of CD8 + cytotoxic T lymphocytes (CTLs) and is a surrogate marker for detection of antigen-specific T cells. Here, we show that tumor-specific CTL clones have impaired IFNγ expression and production upon activation. Assessment of the relationship b...
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Published in: | Frontiers in immunology 2020-03, Vol.11 |
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container_title | Frontiers in immunology |
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creator | Abd Hamid, Megat Yao, Xuan Waugh, Craig Rosendo-Machado, Samara Li, Chris Rostron, Timothy Frankland, John Peng, Yanchun Dong, Tao |
description | Interferon gamma (IFNγ) supports effector responses of CD8
+
cytotoxic T lymphocytes (CTLs) and is a surrogate marker for detection of antigen-specific T cells. Here, we show that tumor-specific CTL clones have impaired IFNγ expression and production upon activation. Assessment of the relationship between IFNγ production and the 5′methylcytosine-guanine (CpG) dinucleotide methylation of the IFNγ promoter using bisulfite treatment has shown that IFNγ
−
CTL clones accumulates CpG hypermethylation within the promoter at key transcription factor binding sites (−186 and −54), known to be vital for transcription. We confirmed these findings using
ex vivo
isolated and short-term expanded bulk tumor-specific CTL lines from four cancer patients and demonstrated that IFNγ methylation inversely correlates with transcription, protein level, and cytotoxicity. Altogether, we propose that a sizeable portion of human tumor-specific CTLs are deficient in IFNγ response, contributed by CpG hypermethylation of the IFNγ promoter. Our findings have important implications for immunotherapy strategies and for methods to detect human antigen-specific T cells. |
doi_str_mv | 10.3389/fimmu.2020.00310 |
format | article |
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+
cytotoxic T lymphocytes (CTLs) and is a surrogate marker for detection of antigen-specific T cells. Here, we show that tumor-specific CTL clones have impaired IFNγ expression and production upon activation. Assessment of the relationship between IFNγ production and the 5′methylcytosine-guanine (CpG) dinucleotide methylation of the IFNγ promoter using bisulfite treatment has shown that IFNγ
−
CTL clones accumulates CpG hypermethylation within the promoter at key transcription factor binding sites (−186 and −54), known to be vital for transcription. We confirmed these findings using
ex vivo
isolated and short-term expanded bulk tumor-specific CTL lines from four cancer patients and demonstrated that IFNγ methylation inversely correlates with transcription, protein level, and cytotoxicity. Altogether, we propose that a sizeable portion of human tumor-specific CTLs are deficient in IFNγ response, contributed by CpG hypermethylation of the IFNγ promoter. Our findings have important implications for immunotherapy strategies and for methods to detect human antigen-specific T cells.</description><identifier>ISSN: 1664-3224</identifier><identifier>EISSN: 1664-3224</identifier><identifier>DOI: 10.3389/fimmu.2020.00310</identifier><identifier>PMID: 32194559</identifier><language>eng</language><publisher>Frontiers Media S.A</publisher><subject>CD8+ T cells ; Immunology ; interferon gamma ; methylation ; mRNA ; promoter ; response</subject><ispartof>Frontiers in immunology, 2020-03, Vol.11</ispartof><rights>Copyright © 2020 Abd Hamid, Yao, Waugh, Rosendo-Machado, Li, Rostron, Frankland, Peng and Dong. 2020 Abd Hamid, Yao, Waugh, Rosendo-Machado, Li, Rostron, Frankland, Peng and Dong</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c406t-b43de0a11b1322b8d97544fb67d27f756951f57f94ac6ccb5ed0db88d2086f343</citedby><cites>FETCH-LOGICAL-c406t-b43de0a11b1322b8d97544fb67d27f756951f57f94ac6ccb5ed0db88d2086f343</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7066077/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7066077/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27923,27924,53790,53792</link.rule.ids></links><search><creatorcontrib>Abd Hamid, Megat</creatorcontrib><creatorcontrib>Yao, Xuan</creatorcontrib><creatorcontrib>Waugh, Craig</creatorcontrib><creatorcontrib>Rosendo-Machado, Samara</creatorcontrib><creatorcontrib>Li, Chris</creatorcontrib><creatorcontrib>Rostron, Timothy</creatorcontrib><creatorcontrib>Frankland, John</creatorcontrib><creatorcontrib>Peng, Yanchun</creatorcontrib><creatorcontrib>Dong, Tao</creatorcontrib><title>Defective Interferon Gamma Production by Tumor-Specific CD8+ T Cells Is Associated With 5′Methylcytosine-Guanine Hypermethylation of Interferon Gamma Promoter</title><title>Frontiers in immunology</title><description>Interferon gamma (IFNγ) supports effector responses of CD8
+
cytotoxic T lymphocytes (CTLs) and is a surrogate marker for detection of antigen-specific T cells. Here, we show that tumor-specific CTL clones have impaired IFNγ expression and production upon activation. Assessment of the relationship between IFNγ production and the 5′methylcytosine-guanine (CpG) dinucleotide methylation of the IFNγ promoter using bisulfite treatment has shown that IFNγ
−
CTL clones accumulates CpG hypermethylation within the promoter at key transcription factor binding sites (−186 and −54), known to be vital for transcription. We confirmed these findings using
ex vivo
isolated and short-term expanded bulk tumor-specific CTL lines from four cancer patients and demonstrated that IFNγ methylation inversely correlates with transcription, protein level, and cytotoxicity. Altogether, we propose that a sizeable portion of human tumor-specific CTLs are deficient in IFNγ response, contributed by CpG hypermethylation of the IFNγ promoter. Our findings have important implications for immunotherapy strategies and for methods to detect human antigen-specific T cells.</description><subject>CD8+ T cells</subject><subject>Immunology</subject><subject>interferon gamma</subject><subject>methylation</subject><subject>mRNA</subject><subject>promoter</subject><subject>response</subject><issn>1664-3224</issn><issn>1664-3224</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNptkc1q3DAUhU1paEKSfZfaF08k68f2phAm7WQgpYVO6VLo5yqjYFuDZAe866PkGfpIfZIqnlIa6N2cyznoE9IpircEryht2ivn-35aVbjCK4wpwa-KMyIEK2lVsdf_7KfFZUoPOA9rKaX8TXFKK9Iyztuz4ukGHJjRPwLaDiNEBzEMaKP6XqEvMdgpZ9nQM9pNfYjl1wMY77xB65vmHdqhNXRdQtuErlMKxqsRLPruxz3iv378_ATjfu7MPIbkByg3kxqyotv5ALFfMrXQg_vv5X3I3kVx4lSX4PKPnhffPn7YrW_Lu8-b7fr6rjQMi7HUjFrAihBN8pt1Y9uaM-a0qG1Vu5qLlhPHa9cyZYQxmoPFVjeNrXAjHGX0vNgeuTaoB3mIvldxlkF5uRgh3ksVR286kAJbAOus0aZi-ftVDbpVuLFC5EjrzHp_ZB0m3YM1MIxRdS-gL5PB7-V9eJQ1zoS6zgB8BJgYUorg_p4lWD6XL5fy5XP5cimf_gZYWadL</recordid><startdate>20200305</startdate><enddate>20200305</enddate><creator>Abd Hamid, Megat</creator><creator>Yao, Xuan</creator><creator>Waugh, Craig</creator><creator>Rosendo-Machado, Samara</creator><creator>Li, Chris</creator><creator>Rostron, Timothy</creator><creator>Frankland, John</creator><creator>Peng, Yanchun</creator><creator>Dong, Tao</creator><general>Frontiers Media S.A</general><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20200305</creationdate><title>Defective Interferon Gamma Production by Tumor-Specific CD8+ T Cells Is Associated With 5′Methylcytosine-Guanine Hypermethylation of Interferon Gamma Promoter</title><author>Abd Hamid, Megat ; Yao, Xuan ; Waugh, Craig ; Rosendo-Machado, Samara ; Li, Chris ; Rostron, Timothy ; Frankland, John ; Peng, Yanchun ; Dong, Tao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c406t-b43de0a11b1322b8d97544fb67d27f756951f57f94ac6ccb5ed0db88d2086f343</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>CD8+ T cells</topic><topic>Immunology</topic><topic>interferon gamma</topic><topic>methylation</topic><topic>mRNA</topic><topic>promoter</topic><topic>response</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Abd Hamid, Megat</creatorcontrib><creatorcontrib>Yao, Xuan</creatorcontrib><creatorcontrib>Waugh, Craig</creatorcontrib><creatorcontrib>Rosendo-Machado, Samara</creatorcontrib><creatorcontrib>Li, Chris</creatorcontrib><creatorcontrib>Rostron, Timothy</creatorcontrib><creatorcontrib>Frankland, John</creatorcontrib><creatorcontrib>Peng, Yanchun</creatorcontrib><creatorcontrib>Dong, Tao</creatorcontrib><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in immunology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Abd Hamid, Megat</au><au>Yao, Xuan</au><au>Waugh, Craig</au><au>Rosendo-Machado, Samara</au><au>Li, Chris</au><au>Rostron, Timothy</au><au>Frankland, John</au><au>Peng, Yanchun</au><au>Dong, Tao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Defective Interferon Gamma Production by Tumor-Specific CD8+ T Cells Is Associated With 5′Methylcytosine-Guanine Hypermethylation of Interferon Gamma Promoter</atitle><jtitle>Frontiers in immunology</jtitle><date>2020-03-05</date><risdate>2020</risdate><volume>11</volume><issn>1664-3224</issn><eissn>1664-3224</eissn><abstract>Interferon gamma (IFNγ) supports effector responses of CD8
+
cytotoxic T lymphocytes (CTLs) and is a surrogate marker for detection of antigen-specific T cells. Here, we show that tumor-specific CTL clones have impaired IFNγ expression and production upon activation. Assessment of the relationship between IFNγ production and the 5′methylcytosine-guanine (CpG) dinucleotide methylation of the IFNγ promoter using bisulfite treatment has shown that IFNγ
−
CTL clones accumulates CpG hypermethylation within the promoter at key transcription factor binding sites (−186 and −54), known to be vital for transcription. We confirmed these findings using
ex vivo
isolated and short-term expanded bulk tumor-specific CTL lines from four cancer patients and demonstrated that IFNγ methylation inversely correlates with transcription, protein level, and cytotoxicity. Altogether, we propose that a sizeable portion of human tumor-specific CTLs are deficient in IFNγ response, contributed by CpG hypermethylation of the IFNγ promoter. Our findings have important implications for immunotherapy strategies and for methods to detect human antigen-specific T cells.</abstract><pub>Frontiers Media S.A</pub><pmid>32194559</pmid><doi>10.3389/fimmu.2020.00310</doi><oa>free_for_read</oa></addata></record> |
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subjects | CD8+ T cells Immunology interferon gamma methylation mRNA promoter response |
title | Defective Interferon Gamma Production by Tumor-Specific CD8+ T Cells Is Associated With 5′Methylcytosine-Guanine Hypermethylation of Interferon Gamma Promoter |
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