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Genetic and Transgenic Reagents for Drosophila simulans, D. mauritiana, D. yakuba, D. santomea, and D. virilis
Abstract Species of the Drosophila melanogaster species subgroup, including the species D. simulans, D. mauritiana, D. yakuba, and D. santomea, have long served as model systems for studying evolution. However, studies in these species have been limited by a paucity of genetic and transgenic reagent...
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Published in: | G3 : genes - genomes - genetics 2017-04, Vol.7 (4), p.1339-1347 |
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creator | Stern, David L Crocker, Justin Ding, Yun Frankel, Nicolas Kappes, Gretchen Kim, Elizabeth Kuzmickas, Ryan Lemire, Andrew Mast, Joshua D Picard, Serge |
description | Abstract
Species of the Drosophila melanogaster species subgroup, including the species D. simulans, D. mauritiana, D. yakuba, and D. santomea, have long served as model systems for studying evolution. However, studies in these species have been limited by a paucity of genetic and transgenic reagents. Here, we describe a collection of transgenic and genetic strains generated to facilitate genetic studies within and between these species. We have generated many strains of each species containing mapped piggyBac transposons including an enhanced yellow fluorescent protein (EYFP) gene expressed in the eyes and a ϕC31 attP site-specific integration site. We have tested a subset of these lines for integration efficiency and reporter gene expression levels. We have also generated a smaller collection of other lines expressing other genetically encoded fluorescent molecules in the eyes and a number of other transgenic reagents that will be useful for functional studies in these species. In addition, we have mapped the insertion locations of 58 transposable elements in D. virilis that will be useful for genetic mapping studies. |
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Species of the Drosophila melanogaster species subgroup, including the species D. simulans, D. mauritiana, D. yakuba, and D. santomea, have long served as model systems for studying evolution. However, studies in these species have been limited by a paucity of genetic and transgenic reagents. Here, we describe a collection of transgenic and genetic strains generated to facilitate genetic studies within and between these species. We have generated many strains of each species containing mapped piggyBac transposons including an enhanced yellow fluorescent protein (EYFP) gene expressed in the eyes and a ϕC31 attP site-specific integration site. We have tested a subset of these lines for integration efficiency and reporter gene expression levels. We have also generated a smaller collection of other lines expressing other genetically encoded fluorescent molecules in the eyes and a number of other transgenic reagents that will be useful for functional studies in these species. In addition, we have mapped the insertion locations of 58 transposable elements in D. virilis that will be useful for genetic mapping studies.</description><identifier>ISSN: 2160-1836</identifier><identifier>EISSN: 2160-1836</identifier><identifier>DOI: 10.1534/g3.116.038885</identifier><identifier>PMID: 28280212</identifier><language>eng</language><publisher>United States: Oxford University Press</publisher><subject>Alleles ; Animals ; Animals, Genetically Modified ; DNA Transposable Elements - genetics ; Drosophila ; Drosophila - genetics ; Drosophila simulans - genetics ; evolution ; Eye - metabolism ; Gene Expression Regulation ; genetics ; Genomics ; Green Fluorescent Proteins - metabolism ; Investigations ; Mutagenesis, Insertional - genetics ; speciation ; Species Specificity ; Transgenes ; transgenics ; ϕC31 integrase</subject><ispartof>G3 : genes - genomes - genetics, 2017-04, Vol.7 (4), p.1339-1347</ispartof><rights>2017 Stern et al. 2017</rights><rights>Copyright © 2017 Stern et al.</rights><rights>Copyright © 2017 Stern 2017</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c447t-12cf3eae71578aa26f3a1e6b9f6e0932c6590fa7c0fbf34fafe42f27febcfcf3</citedby><cites>FETCH-LOGICAL-c447t-12cf3eae71578aa26f3a1e6b9f6e0932c6590fa7c0fbf34fafe42f27febcfcf3</cites><orcidid>0000-0002-1847-6483</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5386881/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5386881/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/28280212$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Stern, David L</creatorcontrib><creatorcontrib>Crocker, Justin</creatorcontrib><creatorcontrib>Ding, Yun</creatorcontrib><creatorcontrib>Frankel, Nicolas</creatorcontrib><creatorcontrib>Kappes, Gretchen</creatorcontrib><creatorcontrib>Kim, Elizabeth</creatorcontrib><creatorcontrib>Kuzmickas, Ryan</creatorcontrib><creatorcontrib>Lemire, Andrew</creatorcontrib><creatorcontrib>Mast, Joshua D</creatorcontrib><creatorcontrib>Picard, Serge</creatorcontrib><title>Genetic and Transgenic Reagents for Drosophila simulans, D. mauritiana, D. yakuba, D. santomea, and D. virilis</title><title>G3 : genes - genomes - genetics</title><addtitle>G3 (Bethesda)</addtitle><description>Abstract
Species of the Drosophila melanogaster species subgroup, including the species D. simulans, D. mauritiana, D. yakuba, and D. santomea, have long served as model systems for studying evolution. However, studies in these species have been limited by a paucity of genetic and transgenic reagents. Here, we describe a collection of transgenic and genetic strains generated to facilitate genetic studies within and between these species. We have generated many strains of each species containing mapped piggyBac transposons including an enhanced yellow fluorescent protein (EYFP) gene expressed in the eyes and a ϕC31 attP site-specific integration site. We have tested a subset of these lines for integration efficiency and reporter gene expression levels. We have also generated a smaller collection of other lines expressing other genetically encoded fluorescent molecules in the eyes and a number of other transgenic reagents that will be useful for functional studies in these species. In addition, we have mapped the insertion locations of 58 transposable elements in D. virilis that will be useful for genetic mapping studies.</description><subject>Alleles</subject><subject>Animals</subject><subject>Animals, Genetically Modified</subject><subject>DNA Transposable Elements - genetics</subject><subject>Drosophila</subject><subject>Drosophila - genetics</subject><subject>Drosophila simulans - genetics</subject><subject>evolution</subject><subject>Eye - metabolism</subject><subject>Gene Expression Regulation</subject><subject>genetics</subject><subject>Genomics</subject><subject>Green Fluorescent Proteins - metabolism</subject><subject>Investigations</subject><subject>Mutagenesis, Insertional - genetics</subject><subject>speciation</subject><subject>Species Specificity</subject><subject>Transgenes</subject><subject>transgenics</subject><subject>ϕC31 integrase</subject><issn>2160-1836</issn><issn>2160-1836</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNqFkUtP3TAQha2qqCDKsluUZRfNxY_YcTZIFbSAhFQJ3b018R0HQxJf7ASJf48hlMcKbzwzPv7GnkPID0ZXTIrqqBMrxtSKCq21_EL2OFO0ZFqor-_iXXKQ0g3NS0qlKvWN7HLNNeWM75HxDEecvC1g3BTrCGPqcMzpFUIOplS4EIvTGFLYXvseiuSHuc-qX8Xpqhhgjn7yMMJz-gC3c7uECcYpDJiTJ24u3Pvoe5--kx0HfcKDl32frP_-WZ-cl5f_zi5Ofl-WtqrqqWTcOoGANZO1BuDKCWCo2sYppI3gVsmGOqgtda0TlQOHFXe8dthal6_uk4sFuwlwY7bRDxAfTABvngshdgZi_nWPRknUWLtWonJVyyhoh0wpAMlabBqdWccLazu3A25snkqE_gP048nor00X7o0UWmnNMuDnCyCGuxnTZAafLPZ5jBjmZJiuVdUooUWWlovU5omniO61DaPmyXHTCZMdN4vjWX_4_m2v6v_-vvUO8_YT1iOSv7O7</recordid><startdate>20170401</startdate><enddate>20170401</enddate><creator>Stern, David L</creator><creator>Crocker, Justin</creator><creator>Ding, Yun</creator><creator>Frankel, Nicolas</creator><creator>Kappes, Gretchen</creator><creator>Kim, Elizabeth</creator><creator>Kuzmickas, Ryan</creator><creator>Lemire, Andrew</creator><creator>Mast, Joshua D</creator><creator>Picard, Serge</creator><general>Oxford University Press</general><general>Genetics Society of America</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-1847-6483</orcidid></search><sort><creationdate>20170401</creationdate><title>Genetic and Transgenic Reagents for Drosophila simulans, D. mauritiana, D. yakuba, D. santomea, and D. virilis</title><author>Stern, David L ; Crocker, Justin ; Ding, Yun ; Frankel, Nicolas ; Kappes, Gretchen ; Kim, Elizabeth ; Kuzmickas, Ryan ; Lemire, Andrew ; Mast, Joshua D ; Picard, Serge</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c447t-12cf3eae71578aa26f3a1e6b9f6e0932c6590fa7c0fbf34fafe42f27febcfcf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>Alleles</topic><topic>Animals</topic><topic>Animals, Genetically Modified</topic><topic>DNA Transposable Elements - genetics</topic><topic>Drosophila</topic><topic>Drosophila - genetics</topic><topic>Drosophila simulans - genetics</topic><topic>evolution</topic><topic>Eye - metabolism</topic><topic>Gene Expression Regulation</topic><topic>genetics</topic><topic>Genomics</topic><topic>Green Fluorescent Proteins - metabolism</topic><topic>Investigations</topic><topic>Mutagenesis, Insertional - genetics</topic><topic>speciation</topic><topic>Species Specificity</topic><topic>Transgenes</topic><topic>transgenics</topic><topic>ϕC31 integrase</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Stern, David L</creatorcontrib><creatorcontrib>Crocker, Justin</creatorcontrib><creatorcontrib>Ding, Yun</creatorcontrib><creatorcontrib>Frankel, Nicolas</creatorcontrib><creatorcontrib>Kappes, Gretchen</creatorcontrib><creatorcontrib>Kim, Elizabeth</creatorcontrib><creatorcontrib>Kuzmickas, Ryan</creatorcontrib><creatorcontrib>Lemire, Andrew</creatorcontrib><creatorcontrib>Mast, Joshua D</creatorcontrib><creatorcontrib>Picard, Serge</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>G3 : genes - genomes - genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Stern, David L</au><au>Crocker, Justin</au><au>Ding, Yun</au><au>Frankel, Nicolas</au><au>Kappes, Gretchen</au><au>Kim, Elizabeth</au><au>Kuzmickas, Ryan</au><au>Lemire, Andrew</au><au>Mast, Joshua D</au><au>Picard, Serge</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic and Transgenic Reagents for Drosophila simulans, D. mauritiana, D. yakuba, D. santomea, and D. virilis</atitle><jtitle>G3 : genes - genomes - genetics</jtitle><addtitle>G3 (Bethesda)</addtitle><date>2017-04-01</date><risdate>2017</risdate><volume>7</volume><issue>4</issue><spage>1339</spage><epage>1347</epage><pages>1339-1347</pages><issn>2160-1836</issn><eissn>2160-1836</eissn><abstract>Abstract
Species of the Drosophila melanogaster species subgroup, including the species D. simulans, D. mauritiana, D. yakuba, and D. santomea, have long served as model systems for studying evolution. However, studies in these species have been limited by a paucity of genetic and transgenic reagents. Here, we describe a collection of transgenic and genetic strains generated to facilitate genetic studies within and between these species. We have generated many strains of each species containing mapped piggyBac transposons including an enhanced yellow fluorescent protein (EYFP) gene expressed in the eyes and a ϕC31 attP site-specific integration site. We have tested a subset of these lines for integration efficiency and reporter gene expression levels. We have also generated a smaller collection of other lines expressing other genetically encoded fluorescent molecules in the eyes and a number of other transgenic reagents that will be useful for functional studies in these species. In addition, we have mapped the insertion locations of 58 transposable elements in D. virilis that will be useful for genetic mapping studies.</abstract><cop>United States</cop><pub>Oxford University Press</pub><pmid>28280212</pmid><doi>10.1534/g3.116.038885</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-1847-6483</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Alleles Animals Animals, Genetically Modified DNA Transposable Elements - genetics Drosophila Drosophila - genetics Drosophila simulans - genetics evolution Eye - metabolism Gene Expression Regulation genetics Genomics Green Fluorescent Proteins - metabolism Investigations Mutagenesis, Insertional - genetics speciation Species Specificity Transgenes transgenics ϕC31 integrase |
title | Genetic and Transgenic Reagents for Drosophila simulans, D. mauritiana, D. yakuba, D. santomea, and D. virilis |
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