Plasma-derived exosomal long noncoding RNAs of pancreatic cancer patients as novel blood-based biomarkers of disease

• Published in: BMC cancer 2024-08, Vol.24 (1), p.961-10, Article 961
• Main Authors: He, Xiaomeng, Chen, Litian, Di, Yang, Li, Wenyang, Zhang, Xin, Bai, Zhihui, Wang, Zhefeng, Liu, Shanshan, Corpe, Christopher, Wang, Jin
• Format: Article
• Language: English
• Subjects: Aged; Antisense RNA; Biological markers; Biomarker; Biomarkers; Biomarkers, Tumor - blood; Biomarkers, Tumor - genetics; CA-19-9 Antigen - blood; Cancer; Cancer patients; Care and treatment; China; Development and progression; Diagnosis; Diseases; Exosome; Exosomes - genetics; Exosomes - metabolism; Female; Gene Expression Profiling - methods; Gene Expression Regulation, Neoplastic; Genetic aspects; Glycoproteins; Health aspects; Health care; Humans; Identification and classification; Long noncoding RNA; Male; Malignancy; Medical colleges; Medical prognosis; Membranes; Metastasis; MicroRNA; MicroRNAs; Middle Aged; Non-coding RNA; Pancreatic cancer; Pancreatic Neoplasms - blood; Pancreatic Neoplasms - genetics; Pancreatic Neoplasms - pathology; Patients; Plasma; Polymerase chain reaction; Prognosis; Proteins; Reagents; RNA; RNA, Long Noncoding - blood; RNA, Long Noncoding - genetics; ROC Curve; Sequence analysis; Sialyl Lewis a antigen; Taiwan; Transcriptomes; Transmission electron microscopy; Tumor markers
• ISSN: 1471-2407; 1471-2407
• DOI: 10.1186/s12885-024-12755-z

Pancreatic cancer (PaCa) is one of the most intractable and fatal malignancies and is associated with the dysregulation of long noncoding RNAs (lncRNAs), which are a large class of noncoding RNAs larger than 200 nt that act as competing endogenous RNAs or sponges for miRNAs to induce tumour biological behaviours. However, their clinical value in treating pancreatic cancer has been poorly explained, but they are essential for improving the prognosis of PaCa patients. We analysed the plasma-derived exosomal lncRNA profiles of PaCa patients by using whole-transcriptome sequencing analysis and identified significantly differentially expressed lncRNAs, including LINC01268, LINC02802, AC124854.1, and AL132657.1. In the current study, the expression levels of four plasma-derived exosomal lncRNAs in PaCa plasma were validated via quantitative real-time polymerase chain reaction (qRT‒PCR). The relationship between the expression of the four lncRNAs and the clinicopathological features of patients with PaCa was also evaluated. We demonstrated that exosomal LINC01268, LINC02802, AC124854.1 and AL132657.1 were highly expressed in PaCa plasma compared with those in normal controls; moreover, they were positively correlated with the serum expression of carbohydrate antigen 19-9 (CA19-9). The receiver operating characteristic curves (AUCs) of the four lncRNAs were 0.8421, 0.6544, 0.7190, and 0.6321, and the AUC value of the combination of the four exosomal lncRNAs increased to 0.8476, with a sensitivity of 0.72 and specificity of 0.89. These results suggested that the plasma-derived exosomal genes LINC01268, LINC02802, AC124854.1, and AL132657.1 may be novel diagnostic markers for PaCa. Our research demonstrated that the plasma-derived exosomal lncRNAs of PaCa patients are novel blood-based biomarkers of disease.