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Dietary Lactobacillus delbrueckii Affects Ileal Bacterial Composition and Circadian Rhythms in Pigs
Intestinal bacteria, synchronized with diet and feeding time, exhibit circadian rhythms and anticipate host gut function; however the effect of dietary probiotics on gut bacterial diurnal rhythms remains obscure. In this study, bacteria were sequenced at 6 Zeitgeber times (ZT) from a pig model of il...
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Published in: | Animals (Basel) 2024-01, Vol.14 (3), p.412 |
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description | Intestinal bacteria, synchronized with diet and feeding time, exhibit circadian rhythms and anticipate host gut function; however the effect of dietary probiotics on gut bacterial diurnal rhythms remains obscure. In this study, bacteria were sequenced at 6 Zeitgeber times (ZT) from a pig model of ileal T-shaped fistula to test ileal bacterial composition and circadian rhythms after
administration. The results showed that dietary
enhanced ileal bacterial α-diversity at Zeitgeber time (ZT) 16, evidenced by an increased Simpson index compared with control pigs. At the phylum level, Firmicutes was identified as the largest phyla represented in pigs, but dietary
only increased the abundance of Tenericutes at ZT16. At the genus level, 11/100 genera (i.e.,
,
,
,
,
,
,
,
,
,
, and
) were markedly differentiated in
-fed pigs and the effect was rhythmicity-dependent. Meanwhile, dietary
affected six pathways of bacterial functions, such as membrane transport, metabolism of cofactors and vitamins, cell motility, the endocrine system, signaling molecules and interaction, and the nervous system. Cosinor analysis was conducted to test bacterial circadian rhythm in pigs, while no significant circadian rhythm in bacterial α-diversity and phyla composition was observed.
,
, and
exhibited significant rhythmic fluctuation in the control pigs, which was disturbed by probiotic exposure. In addition, dietary
affected circadian rhythms in ileal
,
,
, and
abundances. Dietary
affected both ileal bacterial composition and circadian rhythms, which might further regulate gut function and host metabolism in pigs. |
doi_str_mv | 10.3390/ani14030412 |
format | article |
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administration. The results showed that dietary
enhanced ileal bacterial α-diversity at Zeitgeber time (ZT) 16, evidenced by an increased Simpson index compared with control pigs. At the phylum level, Firmicutes was identified as the largest phyla represented in pigs, but dietary
only increased the abundance of Tenericutes at ZT16. At the genus level, 11/100 genera (i.e.,
,
,
,
,
,
,
,
,
,
, and
) were markedly differentiated in
-fed pigs and the effect was rhythmicity-dependent. Meanwhile, dietary
affected six pathways of bacterial functions, such as membrane transport, metabolism of cofactors and vitamins, cell motility, the endocrine system, signaling molecules and interaction, and the nervous system. Cosinor analysis was conducted to test bacterial circadian rhythm in pigs, while no significant circadian rhythm in bacterial α-diversity and phyla composition was observed.
,
, and
exhibited significant rhythmic fluctuation in the control pigs, which was disturbed by probiotic exposure. In addition, dietary
affected circadian rhythms in ileal
,
,
, and
abundances. Dietary
affected both ileal bacterial composition and circadian rhythms, which might further regulate gut function and host metabolism in pigs.</description><identifier>ISSN: 2076-2615</identifier><identifier>EISSN: 2076-2615</identifier><identifier>DOI: 10.3390/ani14030412</identifier><identifier>PMID: 38338054</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Bacteria ; Bar codes ; Catheters ; Circadian rhythm ; circadian rhythms ; Diet ; Genetic testing ; Genomes ; Hogs ; ileal bacteria ; L. delbrueckii ; Metabolism ; Microbiota ; Nutrients ; Nutrition ; pigs ; Probiotics ; Small intestine ; Software</subject><ispartof>Animals (Basel), 2024-01, Vol.14 (3), p.412</ispartof><rights>2024 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c378t-77b1d8971539d5a51d89eac562edca986e3e1f0a401c4739136399acb899d61e3</cites><orcidid>0009-0007-8982-0847</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2923885562/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2923885562?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,25731,27901,27902,36989,36990,44566,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38338054$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Luo, Wenxin</creatorcontrib><creatorcontrib>Yin, Zhangzheng</creatorcontrib><creatorcontrib>Zhang, Mingliang</creatorcontrib><creatorcontrib>Huang, Xingguo</creatorcontrib><creatorcontrib>Yin, Jie</creatorcontrib><title>Dietary Lactobacillus delbrueckii Affects Ileal Bacterial Composition and Circadian Rhythms in Pigs</title><title>Animals (Basel)</title><addtitle>Animals (Basel)</addtitle><description>Intestinal bacteria, synchronized with diet and feeding time, exhibit circadian rhythms and anticipate host gut function; however the effect of dietary probiotics on gut bacterial diurnal rhythms remains obscure. In this study, bacteria were sequenced at 6 Zeitgeber times (ZT) from a pig model of ileal T-shaped fistula to test ileal bacterial composition and circadian rhythms after
administration. The results showed that dietary
enhanced ileal bacterial α-diversity at Zeitgeber time (ZT) 16, evidenced by an increased Simpson index compared with control pigs. At the phylum level, Firmicutes was identified as the largest phyla represented in pigs, but dietary
only increased the abundance of Tenericutes at ZT16. At the genus level, 11/100 genera (i.e.,
,
,
,
,
,
,
,
,
,
, and
) were markedly differentiated in
-fed pigs and the effect was rhythmicity-dependent. Meanwhile, dietary
affected six pathways of bacterial functions, such as membrane transport, metabolism of cofactors and vitamins, cell motility, the endocrine system, signaling molecules and interaction, and the nervous system. Cosinor analysis was conducted to test bacterial circadian rhythm in pigs, while no significant circadian rhythm in bacterial α-diversity and phyla composition was observed.
,
, and
exhibited significant rhythmic fluctuation in the control pigs, which was disturbed by probiotic exposure. In addition, dietary
affected circadian rhythms in ileal
,
,
, and
abundances. Dietary
affected both ileal bacterial composition and circadian rhythms, which might further regulate gut function and host metabolism in pigs.</description><subject>Bacteria</subject><subject>Bar codes</subject><subject>Catheters</subject><subject>Circadian rhythm</subject><subject>circadian rhythms</subject><subject>Diet</subject><subject>Genetic testing</subject><subject>Genomes</subject><subject>Hogs</subject><subject>ileal bacteria</subject><subject>L. delbrueckii</subject><subject>Metabolism</subject><subject>Microbiota</subject><subject>Nutrients</subject><subject>Nutrition</subject><subject>pigs</subject><subject>Probiotics</subject><subject>Small intestine</subject><subject>Software</subject><issn>2076-2615</issn><issn>2076-2615</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkc1r3DAQxU1paUKaU-9F0EuhbCN5rK9juunHwkJCac9mJI8TbW1rK9mH_PfRdtMQqoveiB-PeXpV9VbwTwCWX-AURMOBN6J-UZ3WXKtVrYR8-UyfVOc573g5WoKQ4nV1AgbAcNmcVv4q0Izpnm3Rz9GhD8OwZNbR4NJC_ncI7LLvyc-ZbQbCgX0uHKVQ1DqO-5jDHOLEcOrYOiSPXcCJ_bi7n-_GzMLEbsJtflO96nHIdP54n1W_vn75uf6-2l5_26wvtysP2swrrZ3ojNVCgu0kysNA6KWqqfNojSIg0XNsuPCNBitAgbXonbG2U4LgrNocfbuIu3afwliCtRFD-_chptsW0xz8QK022pHnGsvPNQY0qsY6BFROOl03rnh9OHrtU_yzUJ7bMWRPw4ATxSW3ta0lB1VbU9D3_6G7uKSpJD1QYIwsEQr18Uj5FHNO1D8tKHh7qLJ9VmWh3z16Lm6k7on9Vxw8AB3wl3M</recordid><startdate>20240126</startdate><enddate>20240126</enddate><creator>Luo, Wenxin</creator><creator>Yin, Zhangzheng</creator><creator>Zhang, Mingliang</creator><creator>Huang, Xingguo</creator><creator>Yin, Jie</creator><general>MDPI AG</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>DOA</scope><orcidid>https://orcid.org/0009-0007-8982-0847</orcidid></search><sort><creationdate>20240126</creationdate><title>Dietary Lactobacillus delbrueckii Affects Ileal Bacterial Composition and Circadian Rhythms in Pigs</title><author>Luo, Wenxin ; Yin, Zhangzheng ; Zhang, Mingliang ; Huang, Xingguo ; Yin, Jie</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c378t-77b1d8971539d5a51d89eac562edca986e3e1f0a401c4739136399acb899d61e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Bacteria</topic><topic>Bar codes</topic><topic>Catheters</topic><topic>Circadian rhythm</topic><topic>circadian rhythms</topic><topic>Diet</topic><topic>Genetic testing</topic><topic>Genomes</topic><topic>Hogs</topic><topic>ileal bacteria</topic><topic>L. delbrueckii</topic><topic>Metabolism</topic><topic>Microbiota</topic><topic>Nutrients</topic><topic>Nutrition</topic><topic>pigs</topic><topic>Probiotics</topic><topic>Small intestine</topic><topic>Software</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Luo, Wenxin</creatorcontrib><creatorcontrib>Yin, Zhangzheng</creatorcontrib><creatorcontrib>Zhang, Mingliang</creatorcontrib><creatorcontrib>Huang, Xingguo</creatorcontrib><creatorcontrib>Yin, Jie</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Publicly Available Content Database (Proquest) (PQ_SDU_P3)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>Directory of Open Access Journals</collection><jtitle>Animals (Basel)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Luo, Wenxin</au><au>Yin, Zhangzheng</au><au>Zhang, Mingliang</au><au>Huang, Xingguo</au><au>Yin, Jie</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Dietary Lactobacillus delbrueckii Affects Ileal Bacterial Composition and Circadian Rhythms in Pigs</atitle><jtitle>Animals (Basel)</jtitle><addtitle>Animals (Basel)</addtitle><date>2024-01-26</date><risdate>2024</risdate><volume>14</volume><issue>3</issue><spage>412</spage><pages>412-</pages><issn>2076-2615</issn><eissn>2076-2615</eissn><abstract>Intestinal bacteria, synchronized with diet and feeding time, exhibit circadian rhythms and anticipate host gut function; however the effect of dietary probiotics on gut bacterial diurnal rhythms remains obscure. In this study, bacteria were sequenced at 6 Zeitgeber times (ZT) from a pig model of ileal T-shaped fistula to test ileal bacterial composition and circadian rhythms after
administration. The results showed that dietary
enhanced ileal bacterial α-diversity at Zeitgeber time (ZT) 16, evidenced by an increased Simpson index compared with control pigs. At the phylum level, Firmicutes was identified as the largest phyla represented in pigs, but dietary
only increased the abundance of Tenericutes at ZT16. At the genus level, 11/100 genera (i.e.,
,
,
,
,
,
,
,
,
,
, and
) were markedly differentiated in
-fed pigs and the effect was rhythmicity-dependent. Meanwhile, dietary
affected six pathways of bacterial functions, such as membrane transport, metabolism of cofactors and vitamins, cell motility, the endocrine system, signaling molecules and interaction, and the nervous system. Cosinor analysis was conducted to test bacterial circadian rhythm in pigs, while no significant circadian rhythm in bacterial α-diversity and phyla composition was observed.
,
, and
exhibited significant rhythmic fluctuation in the control pigs, which was disturbed by probiotic exposure. In addition, dietary
affected circadian rhythms in ileal
,
,
, and
abundances. Dietary
affected both ileal bacterial composition and circadian rhythms, which might further regulate gut function and host metabolism in pigs.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>38338054</pmid><doi>10.3390/ani14030412</doi><orcidid>https://orcid.org/0009-0007-8982-0847</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Bacteria Bar codes Catheters Circadian rhythm circadian rhythms Diet Genetic testing Genomes Hogs ileal bacteria L. delbrueckii Metabolism Microbiota Nutrients Nutrition pigs Probiotics Small intestine Software |
title | Dietary Lactobacillus delbrueckii Affects Ileal Bacterial Composition and Circadian Rhythms in Pigs |
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