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Single-cell analysis of psoriasis resolution demonstrates an inflammatory fibroblast state targeted by IL-23 blockade
Biologic therapies targeting the IL-23/IL-17 axis have transformed the treatment of psoriasis. However, the early mechanisms of action of these drugs remain poorly understood. Here, we perform longitudinal single-cell RNA-sequencing in affected individuals receiving IL-23 inhibitor therapy. By profi...
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Published in: | Nature communications 2024-01, Vol.15 (1), p.913-14, Article 913 |
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container_title | Nature communications |
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creator | Francis, Luc McCluskey, Daniel Ganier, Clarisse Jiang, Treasa Du-Harpur, Xinyi Gabriel, Jeyrroy Dhami, Pawan Kamra, Yogesh Visvanathan, Sudha Barker, Jonathan N. Smith, Catherine H. Capon, Francesca Mahil, Satveer K. |
description | Biologic therapies targeting the IL-23/IL-17 axis have transformed the treatment of psoriasis. However, the early mechanisms of action of these drugs remain poorly understood. Here, we perform longitudinal single-cell RNA-sequencing in affected individuals receiving IL-23 inhibitor therapy. By profiling skin at baseline, day 3 and day 14 of treatment, we demonstrate that IL-23 blockade causes marked gene expression shifts, with fibroblast and myeloid populations displaying the most extensive changes at day 3. We also identify a transient
WNT5A
+
/IL24+
fibroblast state, which is only detectable in lesional skin.
In-silico
and in-vitro studies indicate that signals stemming from these
WNT5A
+
/IL24+
fibroblasts upregulate multiple inflammatory genes in keratinocytes. Importantly, the abundance of
WNT5A
+
/IL24+
fibroblasts is significantly reduced after treatment. This observation is validated
in-silico
, by deconvolution of multiple transcriptomic datasets, and experimentally, by RNA in-situ hybridization. These findings demonstrate that the evolution of inflammatory fibroblast states is a key feature of resolving psoriasis skin.
Single cell profiling of tissue from patients undergoing therapy has the potential to identify drug-induced immune changes. Here the authors show a skin scRNA-seq study of psoriasis patients treated with an IL-23 inhibitor and characterize changes in cell states during early treatment. |
doi_str_mv | 10.1038/s41467-024-44994-w |
format | article |
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WNT5A
+
/IL24+
fibroblast state, which is only detectable in lesional skin.
In-silico
and in-vitro studies indicate that signals stemming from these
WNT5A
+
/IL24+
fibroblasts upregulate multiple inflammatory genes in keratinocytes. Importantly, the abundance of
WNT5A
+
/IL24+
fibroblasts is significantly reduced after treatment. This observation is validated
in-silico
, by deconvolution of multiple transcriptomic datasets, and experimentally, by RNA in-situ hybridization. These findings demonstrate that the evolution of inflammatory fibroblast states is a key feature of resolving psoriasis skin.
Single cell profiling of tissue from patients undergoing therapy has the potential to identify drug-induced immune changes. Here the authors show a skin scRNA-seq study of psoriasis patients treated with an IL-23 inhibitor and characterize changes in cell states during early treatment.</description><identifier>ISSN: 2041-1723</identifier><identifier>EISSN: 2041-1723</identifier><identifier>DOI: 10.1038/s41467-024-44994-w</identifier><identifier>PMID: 38291032</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>13 ; 13/106 ; 13/21 ; 14 ; 14/32 ; 38 ; 38/77 ; 38/91 ; 631/114 ; 631/250/127/1213 ; 631/250/2502 ; 631/250/256/2515 ; 631/250/347 ; Fibroblasts ; Gene expression ; Gene sequencing ; Humanities and Social Sciences ; Hybridization ; Immunosuppressive agents ; Inflammation ; Inhibitors ; Interleukin 23 ; Interleukin 24 ; Keratinocytes ; multidisciplinary ; Psoriasis ; Ribonucleic acid ; RNA ; Science ; Science (multidisciplinary) ; Skin diseases ; Transcriptomics ; Wnt protein</subject><ispartof>Nature communications, 2024-01, Vol.15 (1), p.913-14, Article 913</ispartof><rights>The Author(s) 2024</rights><rights>2024. The Author(s).</rights><rights>The Author(s) 2024. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c541t-d37b8a367dea38134c417d1bf5cba4acc54aafe57951a35b630b924c961a59a13</citedby><cites>FETCH-LOGICAL-c541t-d37b8a367dea38134c417d1bf5cba4acc54aafe57951a35b630b924c961a59a13</cites><orcidid>0000-0003-2432-5793 ; 0009-0002-5786-9340 ; 0000-0003-4692-3794 ; 0000-0003-4492-5200 ; 0009-0006-2476-025X</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2919971900/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2919971900?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38291032$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Francis, Luc</creatorcontrib><creatorcontrib>McCluskey, Daniel</creatorcontrib><creatorcontrib>Ganier, Clarisse</creatorcontrib><creatorcontrib>Jiang, Treasa</creatorcontrib><creatorcontrib>Du-Harpur, Xinyi</creatorcontrib><creatorcontrib>Gabriel, Jeyrroy</creatorcontrib><creatorcontrib>Dhami, Pawan</creatorcontrib><creatorcontrib>Kamra, Yogesh</creatorcontrib><creatorcontrib>Visvanathan, Sudha</creatorcontrib><creatorcontrib>Barker, Jonathan N.</creatorcontrib><creatorcontrib>Smith, Catherine H.</creatorcontrib><creatorcontrib>Capon, Francesca</creatorcontrib><creatorcontrib>Mahil, Satveer K.</creatorcontrib><title>Single-cell analysis of psoriasis resolution demonstrates an inflammatory fibroblast state targeted by IL-23 blockade</title><title>Nature communications</title><addtitle>Nat Commun</addtitle><addtitle>Nat Commun</addtitle><description>Biologic therapies targeting the IL-23/IL-17 axis have transformed the treatment of psoriasis. However, the early mechanisms of action of these drugs remain poorly understood. Here, we perform longitudinal single-cell RNA-sequencing in affected individuals receiving IL-23 inhibitor therapy. By profiling skin at baseline, day 3 and day 14 of treatment, we demonstrate that IL-23 blockade causes marked gene expression shifts, with fibroblast and myeloid populations displaying the most extensive changes at day 3. We also identify a transient
WNT5A
+
/IL24+
fibroblast state, which is only detectable in lesional skin.
In-silico
and in-vitro studies indicate that signals stemming from these
WNT5A
+
/IL24+
fibroblasts upregulate multiple inflammatory genes in keratinocytes. Importantly, the abundance of
WNT5A
+
/IL24+
fibroblasts is significantly reduced after treatment. This observation is validated
in-silico
, by deconvolution of multiple transcriptomic datasets, and experimentally, by RNA in-situ hybridization. These findings demonstrate that the evolution of inflammatory fibroblast states is a key feature of resolving psoriasis skin.
Single cell profiling of tissue from patients undergoing therapy has the potential to identify drug-induced immune changes. 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Sudha</au><au>Barker, Jonathan N.</au><au>Smith, Catherine H.</au><au>Capon, Francesca</au><au>Mahil, Satveer K.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Single-cell analysis of psoriasis resolution demonstrates an inflammatory fibroblast state targeted by IL-23 blockade</atitle><jtitle>Nature communications</jtitle><stitle>Nat Commun</stitle><addtitle>Nat Commun</addtitle><date>2024-01-30</date><risdate>2024</risdate><volume>15</volume><issue>1</issue><spage>913</spage><epage>14</epage><pages>913-14</pages><artnum>913</artnum><issn>2041-1723</issn><eissn>2041-1723</eissn><abstract>Biologic therapies targeting the IL-23/IL-17 axis have transformed the treatment of psoriasis. However, the early mechanisms of action of these drugs remain poorly understood. Here, we perform longitudinal single-cell RNA-sequencing in affected individuals receiving IL-23 inhibitor therapy. By profiling skin at baseline, day 3 and day 14 of treatment, we demonstrate that IL-23 blockade causes marked gene expression shifts, with fibroblast and myeloid populations displaying the most extensive changes at day 3. We also identify a transient
WNT5A
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fibroblast state, which is only detectable in lesional skin.
In-silico
and in-vitro studies indicate that signals stemming from these
WNT5A
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fibroblasts upregulate multiple inflammatory genes in keratinocytes. Importantly, the abundance of
WNT5A
+
/IL24+
fibroblasts is significantly reduced after treatment. This observation is validated
in-silico
, by deconvolution of multiple transcriptomic datasets, and experimentally, by RNA in-situ hybridization. These findings demonstrate that the evolution of inflammatory fibroblast states is a key feature of resolving psoriasis skin.
Single cell profiling of tissue from patients undergoing therapy has the potential to identify drug-induced immune changes. Here the authors show a skin scRNA-seq study of psoriasis patients treated with an IL-23 inhibitor and characterize changes in cell states during early treatment.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>38291032</pmid><doi>10.1038/s41467-024-44994-w</doi><tpages>14</tpages><orcidid>https://orcid.org/0000-0003-2432-5793</orcidid><orcidid>https://orcid.org/0009-0002-5786-9340</orcidid><orcidid>https://orcid.org/0000-0003-4692-3794</orcidid><orcidid>https://orcid.org/0000-0003-4492-5200</orcidid><orcidid>https://orcid.org/0009-0006-2476-025X</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 13 13/106 13/21 14 14/32 38 38/77 38/91 631/114 631/250/127/1213 631/250/2502 631/250/256/2515 631/250/347 Fibroblasts Gene expression Gene sequencing Humanities and Social Sciences Hybridization Immunosuppressive agents Inflammation Inhibitors Interleukin 23 Interleukin 24 Keratinocytes multidisciplinary Psoriasis Ribonucleic acid RNA Science Science (multidisciplinary) Skin diseases Transcriptomics Wnt protein |
title | Single-cell analysis of psoriasis resolution demonstrates an inflammatory fibroblast state targeted by IL-23 blockade |
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