In Silico Methods for the Discovery of Kv7.2/7.3 Channels Modulators: A Comprehensive Review

• Published in: Molecules (Basel, Switzerland) Switzerland), 2024-07, Vol.29 (13), p.3234
• Main Authors: Stagno, Claudio, Mancuso, Francesca, Ciaglia, Tania, Ostacolo, Carmine, Piperno, Anna, Iraci, Nunzio, Micale, Nicola
• Format: Article
• Language: English
• Subjects: Animals; antiepileptic; Computer Simulation; Convulsions & seizures; Crystal structure; Drug Discovery - methods; Epilepsy; Genes; Hormones; Humans; KCNQ; KCNQ2 Potassium Channel - chemistry; KCNQ2 Potassium Channel - genetics; KCNQ2 Potassium Channel - metabolism; KCNQ3 Potassium Channel - antagonists & inhibitors; KCNQ3 Potassium Channel - chemistry; KCNQ3 Potassium Channel - genetics; KCNQ3 Potassium Channel - metabolism; Kinases; Kv7; molecular docking; molecular dynamics; Mutation; Neurological disorders; Physiology; Potassium; potassium channel; Proteins; Structure-Activity Relationship
• ISSN: 1420-3049; 1420-3049
• DOI: 10.3390/molecules29133234

The growing interest in Kv7.2/7.3 agonists originates from the involvement of these channels in several brain hyperexcitability disorders. In particular, Kv7.2/7.3 mutants have been clearly associated with epileptic encephalopathies (DEEs) as well as with a spectrum of focal epilepsy disorders, often associated with developmental plateauing or regression. Nevertheless, there is a lack of available therapeutic options, considering that retigabine, the only molecule used in clinic as a broad-spectrum Kv7 agonist, has been withdrawn from the market in late 2016. This is why several efforts have been made both by both academia and industry in the search for suitable chemotypes acting as Kv7.2/7.3 agonists. In this context, in silico methods have played a major role, since the precise structures of different Kv7 homotetramers have been only recently disclosed. In the present review, the computational methods used for the design of Kv.7.2/7.3 small molecule agonists and the underlying medicinal chemistry are discussed in the context of their biological and structure-function properties.