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OTUD1 regulates cytokine expression and related pathways in goose fatty liver by promoting deubiquitination of its target proteins
Goose fatty liver (or foie gras) does not develop inflammation even in severe steatosis, which is different from human nonalcoholic fatty liver disease (NAFLD), and it is considered as a unique model for NAFLD study. The deubiquitinating enzyme, Ovarian Tumor (OTU)-Deubiquitinase 1 (OTUD1), is invol...
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Published in: | Poultry science 2024-12, Vol.103 (12), p.104382, Article 104382 |
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creator | Zhou, Xiaoyi Xing, Ya Wang, Yuqing Lv, Mengqing Zhang, Pei Zhu, Suyan Ge, Jing Liu, Long Zhao, Minmeng Gong, Haizhou Gong, Daoqing Geng, Tuoyu |
description | Goose fatty liver (or foie gras) does not develop inflammation even in severe steatosis, which is different from human nonalcoholic fatty liver disease (NAFLD), and it is considered as a unique model for NAFLD study. The deubiquitinating enzyme, Ovarian Tumor (OTU)-Deubiquitinase 1 (OTUD1), is involved in various cell biological processes by regulating the expression of cytokines. Its role and mechanism in the formation of goose fatty liver however are not clear yet. This study determined the expression of OTUD1 in goose fatty liver versus normal liver and OTUD1 expression in goose primary liver treated with glucose, fatty acids and insulin using qPCR and immunoblotting assays. OTUD1 gene overexpression and subsequent transcriptome sequencing analysis were performed to identify the differentially expressed genes (DEG) and the pathways where the DEGs are enriched. Immunoprecipitation and protein mass spectrometry were employed to screen the interacting proteins of OTUD1. The results showed that both the mRNA and protein abundances of OTUD1 in goose fatty liver were higher than those of normal liver. In goose primary hepatocytes, palmitic acid and oleic acid both increased the protein levels of OTUD1, while glucose and insulin inhibited the expression of the protein. Overexpression of OTUD1 significantly affected the expression of genes and pathways related to inflammatory/immune responses and cell growth/death. The interacting proteins of OTUD1 are mainly related to membrane transport, immune/inflammatory response, ubiquitination and signaling pathways. The interaction between OTUD1 and AP1G1 was validated by co-immunoprecipitation and immunoblotting assays. Consistently, the relative ubiquitination level of AP1G1 in goose fatty liver was lower than that of normal liver, which is correlated with increased protein abundance of AP1G1 and OTUD1 in goose fatty liver. In conclusion, the increased protein abundance of OTUD1 in goose fatty liver can regulate the expression of cytokines and related pathways during the formation of goose fatty liver by promoting the deubiquitination of the interacting proteins of OTUD1, including AP1G1. |
doi_str_mv | 10.1016/j.psj.2024.104382 |
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The deubiquitinating enzyme, Ovarian Tumor (OTU)-Deubiquitinase 1 (OTUD1), is involved in various cell biological processes by regulating the expression of cytokines. Its role and mechanism in the formation of goose fatty liver however are not clear yet. This study determined the expression of OTUD1 in goose fatty liver versus normal liver and OTUD1 expression in goose primary liver treated with glucose, fatty acids and insulin using qPCR and immunoblotting assays. OTUD1 gene overexpression and subsequent transcriptome sequencing analysis were performed to identify the differentially expressed genes (DEG) and the pathways where the DEGs are enriched. Immunoprecipitation and protein mass spectrometry were employed to screen the interacting proteins of OTUD1. The results showed that both the mRNA and protein abundances of OTUD1 in goose fatty liver were higher than those of normal liver. In goose primary hepatocytes, palmitic acid and oleic acid both increased the protein levels of OTUD1, while glucose and insulin inhibited the expression of the protein. Overexpression of OTUD1 significantly affected the expression of genes and pathways related to inflammatory/immune responses and cell growth/death. The interacting proteins of OTUD1 are mainly related to membrane transport, immune/inflammatory response, ubiquitination and signaling pathways. The interaction between OTUD1 and AP1G1 was validated by co-immunoprecipitation and immunoblotting assays. Consistently, the relative ubiquitination level of AP1G1 in goose fatty liver was lower than that of normal liver, which is correlated with increased protein abundance of AP1G1 and OTUD1 in goose fatty liver. In conclusion, the increased protein abundance of OTUD1 in goose fatty liver can regulate the expression of cytokines and related pathways during the formation of goose fatty liver by promoting the deubiquitination of the interacting proteins of OTUD1, including AP1G1.</description><identifier>ISSN: 0032-5791</identifier><identifier>ISSN: 1525-3171</identifier><identifier>EISSN: 1525-3171</identifier><identifier>DOI: 10.1016/j.psj.2024.104382</identifier><identifier>PMID: 39437555</identifier><language>eng</language><publisher>England: Elsevier Inc</publisher><subject>Animals ; Avian Proteins - genetics ; Avian Proteins - metabolism ; cytokine ; Cytokines - genetics ; Cytokines - metabolism ; Deubiquitinating Enzymes - genetics ; Deubiquitinating Enzymes - metabolism ; deubiquitination ; Fatty Liver - genetics ; Fatty Liver - metabolism ; Fatty Liver - veterinary ; Geese - genetics ; Gene Expression Regulation ; goose ; METABOLISM AND NUTRITION ; NAFLD ; OTUD1 ; Poultry Diseases - genetics ; Poultry Diseases - metabolism ; Ubiquitination</subject><ispartof>Poultry science, 2024-12, Vol.103 (12), p.104382, Article 104382</ispartof><rights>2024 The Authors</rights><rights>Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.</rights><rights>2024 The Authors 2024</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c400t-c4c75cb3e68691afeefdce09c73964cc024b7459d6424f2cd78e678b4ea9ca383</cites><orcidid>0009-0002-3062-3666</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0032579124009611$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,780,784,885,3549,27924,27925,45780</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39437555$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhou, Xiaoyi</creatorcontrib><creatorcontrib>Xing, Ya</creatorcontrib><creatorcontrib>Wang, Yuqing</creatorcontrib><creatorcontrib>Lv, Mengqing</creatorcontrib><creatorcontrib>Zhang, Pei</creatorcontrib><creatorcontrib>Zhu, Suyan</creatorcontrib><creatorcontrib>Ge, Jing</creatorcontrib><creatorcontrib>Liu, Long</creatorcontrib><creatorcontrib>Zhao, Minmeng</creatorcontrib><creatorcontrib>Gong, Haizhou</creatorcontrib><creatorcontrib>Gong, Daoqing</creatorcontrib><creatorcontrib>Geng, Tuoyu</creatorcontrib><title>OTUD1 regulates cytokine expression and related pathways in goose fatty liver by promoting deubiquitination of its target proteins</title><title>Poultry science</title><addtitle>Poult Sci</addtitle><description>Goose fatty liver (or foie gras) does not develop inflammation even in severe steatosis, which is different from human nonalcoholic fatty liver disease (NAFLD), and it is considered as a unique model for NAFLD study. The deubiquitinating enzyme, Ovarian Tumor (OTU)-Deubiquitinase 1 (OTUD1), is involved in various cell biological processes by regulating the expression of cytokines. Its role and mechanism in the formation of goose fatty liver however are not clear yet. This study determined the expression of OTUD1 in goose fatty liver versus normal liver and OTUD1 expression in goose primary liver treated with glucose, fatty acids and insulin using qPCR and immunoblotting assays. OTUD1 gene overexpression and subsequent transcriptome sequencing analysis were performed to identify the differentially expressed genes (DEG) and the pathways where the DEGs are enriched. Immunoprecipitation and protein mass spectrometry were employed to screen the interacting proteins of OTUD1. The results showed that both the mRNA and protein abundances of OTUD1 in goose fatty liver were higher than those of normal liver. In goose primary hepatocytes, palmitic acid and oleic acid both increased the protein levels of OTUD1, while glucose and insulin inhibited the expression of the protein. Overexpression of OTUD1 significantly affected the expression of genes and pathways related to inflammatory/immune responses and cell growth/death. The interacting proteins of OTUD1 are mainly related to membrane transport, immune/inflammatory response, ubiquitination and signaling pathways. The interaction between OTUD1 and AP1G1 was validated by co-immunoprecipitation and immunoblotting assays. Consistently, the relative ubiquitination level of AP1G1 in goose fatty liver was lower than that of normal liver, which is correlated with increased protein abundance of AP1G1 and OTUD1 in goose fatty liver. In conclusion, the increased protein abundance of OTUD1 in goose fatty liver can regulate the expression of cytokines and related pathways during the formation of goose fatty liver by promoting the deubiquitination of the interacting proteins of OTUD1, including AP1G1.</description><subject>Animals</subject><subject>Avian Proteins - genetics</subject><subject>Avian Proteins - metabolism</subject><subject>cytokine</subject><subject>Cytokines - genetics</subject><subject>Cytokines - metabolism</subject><subject>Deubiquitinating Enzymes - genetics</subject><subject>Deubiquitinating Enzymes - metabolism</subject><subject>deubiquitination</subject><subject>Fatty Liver - genetics</subject><subject>Fatty Liver - metabolism</subject><subject>Fatty Liver - veterinary</subject><subject>Geese - genetics</subject><subject>Gene Expression Regulation</subject><subject>goose</subject><subject>METABOLISM AND NUTRITION</subject><subject>NAFLD</subject><subject>OTUD1</subject><subject>Poultry Diseases - genetics</subject><subject>Poultry Diseases - metabolism</subject><subject>Ubiquitination</subject><issn>0032-5791</issn><issn>1525-3171</issn><issn>1525-3171</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2024</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNp9kk1v1DAQhiMEokvhB3BBPnLZxV-xY3FAqBSoVKmX9mw5ziT1ko1T21nIlV9eh5SKXrjYGs87z4xnpijeErwjmIgP-90Y9zuKKc82ZxV9VmxIScstI5I8LzYYM7otpSInxasY9xhTIoR8WZwwxZksy3JT_L66vvlCUIBu6k2CiOyc_A83AIJfY4AYnR-QGZqsWPwNGk26_WnmiNyAOu8joNakNKPeHSGgekZj8Aef3NChBqba3U0uGyYtHN8ilyJKJnSQFmECN8TXxYvW9BHePNynxc3X8-uz79vLq28XZ58vt5ZjnPJpZWlrBqISipgWoG0sYGUlU4Jbm7tQS16qRnDKW2obWYGQVc3BKGtYxU6Li5XbeLPXY3AHE2btjdN_HnzotAnJ2R50RRWhVtK2rQivJDVCKsVJS6zKmSjPrE8ra5zqA-Q6hhRM_wT61DO4W935oyakZFQKkQnvHwjB300Qkz64aKHvzQB-ipoRoiTNA1NZSlapDT7GAO1jHoL1sgg6fyfu9bIIel2EHPPu3wIfI_5OPgs-rgLILT86CDpaB4OFxgWwKffE_Qd_Dzhixys</recordid><startdate>20241201</startdate><enddate>20241201</enddate><creator>Zhou, Xiaoyi</creator><creator>Xing, Ya</creator><creator>Wang, Yuqing</creator><creator>Lv, Mengqing</creator><creator>Zhang, Pei</creator><creator>Zhu, Suyan</creator><creator>Ge, Jing</creator><creator>Liu, Long</creator><creator>Zhao, Minmeng</creator><creator>Gong, Haizhou</creator><creator>Gong, Daoqing</creator><creator>Geng, Tuoyu</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0009-0002-3062-3666</orcidid></search><sort><creationdate>20241201</creationdate><title>OTUD1 regulates cytokine expression and related pathways in goose fatty liver by promoting deubiquitination of its target proteins</title><author>Zhou, Xiaoyi ; Xing, Ya ; Wang, Yuqing ; Lv, Mengqing ; Zhang, Pei ; Zhu, Suyan ; Ge, Jing ; Liu, Long ; Zhao, Minmeng ; Gong, Haizhou ; Gong, Daoqing ; Geng, Tuoyu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c400t-c4c75cb3e68691afeefdce09c73964cc024b7459d6424f2cd78e678b4ea9ca383</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2024</creationdate><topic>Animals</topic><topic>Avian Proteins - genetics</topic><topic>Avian Proteins - metabolism</topic><topic>cytokine</topic><topic>Cytokines - genetics</topic><topic>Cytokines - metabolism</topic><topic>Deubiquitinating Enzymes - genetics</topic><topic>Deubiquitinating Enzymes - metabolism</topic><topic>deubiquitination</topic><topic>Fatty Liver - genetics</topic><topic>Fatty Liver - metabolism</topic><topic>Fatty Liver - veterinary</topic><topic>Geese - genetics</topic><topic>Gene Expression Regulation</topic><topic>goose</topic><topic>METABOLISM AND NUTRITION</topic><topic>NAFLD</topic><topic>OTUD1</topic><topic>Poultry Diseases - genetics</topic><topic>Poultry Diseases - metabolism</topic><topic>Ubiquitination</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhou, Xiaoyi</creatorcontrib><creatorcontrib>Xing, Ya</creatorcontrib><creatorcontrib>Wang, Yuqing</creatorcontrib><creatorcontrib>Lv, Mengqing</creatorcontrib><creatorcontrib>Zhang, Pei</creatorcontrib><creatorcontrib>Zhu, Suyan</creatorcontrib><creatorcontrib>Ge, Jing</creatorcontrib><creatorcontrib>Liu, Long</creatorcontrib><creatorcontrib>Zhao, Minmeng</creatorcontrib><creatorcontrib>Gong, Haizhou</creatorcontrib><creatorcontrib>Gong, Daoqing</creatorcontrib><creatorcontrib>Geng, Tuoyu</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Open Access: DOAJ - Directory of Open Access Journals</collection><jtitle>Poultry science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhou, Xiaoyi</au><au>Xing, Ya</au><au>Wang, Yuqing</au><au>Lv, Mengqing</au><au>Zhang, Pei</au><au>Zhu, Suyan</au><au>Ge, Jing</au><au>Liu, Long</au><au>Zhao, Minmeng</au><au>Gong, Haizhou</au><au>Gong, Daoqing</au><au>Geng, Tuoyu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>OTUD1 regulates cytokine expression and related pathways in goose fatty liver by promoting deubiquitination of its target proteins</atitle><jtitle>Poultry science</jtitle><addtitle>Poult Sci</addtitle><date>2024-12-01</date><risdate>2024</risdate><volume>103</volume><issue>12</issue><spage>104382</spage><pages>104382-</pages><artnum>104382</artnum><issn>0032-5791</issn><issn>1525-3171</issn><eissn>1525-3171</eissn><abstract>Goose fatty liver (or foie gras) does not develop inflammation even in severe steatosis, which is different from human nonalcoholic fatty liver disease (NAFLD), and it is considered as a unique model for NAFLD study. The deubiquitinating enzyme, Ovarian Tumor (OTU)-Deubiquitinase 1 (OTUD1), is involved in various cell biological processes by regulating the expression of cytokines. Its role and mechanism in the formation of goose fatty liver however are not clear yet. This study determined the expression of OTUD1 in goose fatty liver versus normal liver and OTUD1 expression in goose primary liver treated with glucose, fatty acids and insulin using qPCR and immunoblotting assays. OTUD1 gene overexpression and subsequent transcriptome sequencing analysis were performed to identify the differentially expressed genes (DEG) and the pathways where the DEGs are enriched. Immunoprecipitation and protein mass spectrometry were employed to screen the interacting proteins of OTUD1. The results showed that both the mRNA and protein abundances of OTUD1 in goose fatty liver were higher than those of normal liver. In goose primary hepatocytes, palmitic acid and oleic acid both increased the protein levels of OTUD1, while glucose and insulin inhibited the expression of the protein. Overexpression of OTUD1 significantly affected the expression of genes and pathways related to inflammatory/immune responses and cell growth/death. The interacting proteins of OTUD1 are mainly related to membrane transport, immune/inflammatory response, ubiquitination and signaling pathways. The interaction between OTUD1 and AP1G1 was validated by co-immunoprecipitation and immunoblotting assays. Consistently, the relative ubiquitination level of AP1G1 in goose fatty liver was lower than that of normal liver, which is correlated with increased protein abundance of AP1G1 and OTUD1 in goose fatty liver. In conclusion, the increased protein abundance of OTUD1 in goose fatty liver can regulate the expression of cytokines and related pathways during the formation of goose fatty liver by promoting the deubiquitination of the interacting proteins of OTUD1, including AP1G1.</abstract><cop>England</cop><pub>Elsevier Inc</pub><pmid>39437555</pmid><doi>10.1016/j.psj.2024.104382</doi><orcidid>https://orcid.org/0009-0002-3062-3666</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Animals Avian Proteins - genetics Avian Proteins - metabolism cytokine Cytokines - genetics Cytokines - metabolism Deubiquitinating Enzymes - genetics Deubiquitinating Enzymes - metabolism deubiquitination Fatty Liver - genetics Fatty Liver - metabolism Fatty Liver - veterinary Geese - genetics Gene Expression Regulation goose METABOLISM AND NUTRITION NAFLD OTUD1 Poultry Diseases - genetics Poultry Diseases - metabolism Ubiquitination |
title | OTUD1 regulates cytokine expression and related pathways in goose fatty liver by promoting deubiquitination of its target proteins |
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