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Early transcriptomic response of mouse adrenal gland and Y-1 cells to dexamethasone
Glucocorticoids have short- and long-term effects on adrenal gland function and development. RNA sequencing (RNA-seq) was performed to identify early transcriptomic responses to the synthetic glucocorticoid, dexamethasone (Dex), in vitro and in vivo. In total, 1711 genes were differentially expresse...
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Published in: | Endocrine Connections 2022-08, Vol.11 (8), p.1-13 |
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description | Glucocorticoids have short- and long-term effects on adrenal gland function and development. RNA sequencing (RNA-seq) was performed to identify early transcriptomic responses to the synthetic glucocorticoid, dexamethasone (Dex), in vitro and in vivo. In total, 1711 genes were differentially expressed in the adrenal glands of the 1-h Dex-treated mice. Among them, only 113 were also considered differentially expressed genes (DEGs) in murine adrenocortical Y-1 cells treated with Dex for 1 h. Gene ontology analysis showed that the upregulated DEGs in the adrenal gland of the 1-h Dex-treated mice were highly associated with the development of neuronal cells, suggesting the adrenal medulla had a rapid response to Dex. Interestingly, only 4.3% of Dex-responsive genes in the Y-1 cell line under Dex treatment for 1 h were differentially expressed under Dex treatment for 24 h. The heatmaps revealed that most early responsive DEGs in Y-1 cells during 1 h of treatment exhibited a transient response. The expression of these genes under treatment for 24 h returned to basal levels similar to that during control treatment. In , this research compared the rapid transcriptomic effects of Dex stimulation in vivo and in vitro. Notably, adrenocortical Y-1 cells had a transient early response to Dex treatment. Furthermore, the DEGs had a minimal overlap in the 1-h Dex-treated group in vivo and in vitro. |
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RNA sequencing (RNA-seq) was performed to identify early transcriptomic responses to the synthetic glucocorticoid, dexamethasone (Dex), in vitro and in vivo. In total, 1711 genes were differentially expressed in the adrenal glands of the 1-h Dex-treated mice. Among them, only 113 were also considered differentially expressed genes (DEGs) in murine adrenocortical Y-1 cells treated with Dex for 1 h. Gene ontology analysis showed that the upregulated DEGs in the adrenal gland of the 1-h Dex-treated mice were highly associated with the development of neuronal cells, suggesting the adrenal medulla had a rapid response to Dex. Interestingly, only 4.3% of Dex-responsive genes in the Y-1 cell line under Dex treatment for 1 h were differentially expressed under Dex treatment for 24 h. The heatmaps revealed that most early responsive DEGs in Y-1 cells during 1 h of treatment exhibited a transient response. The expression of these genes under treatment for 24 h returned to basal levels similar to that during control treatment. In , this research compared the rapid transcriptomic effects of Dex stimulation in vivo and in vitro. Notably, adrenocortical Y-1 cells had a transient early response to Dex treatment. Furthermore, the DEGs had a minimal overlap in the 1-h Dex-treated group in vivo and in vitro.</description><identifier>ISSN: 2049-3614</identifier><identifier>EISSN: 2049-3614</identifier><identifier>DOI: 10.1530/EC-22-0064</identifier><identifier>PMID: 35904237</identifier><language>eng</language><publisher>England: Bioscientifica Ltd</publisher><subject>adrenal gland ; dexamethasone ; glucocorticoids ; transcriptome ; y-1 cells</subject><ispartof>Endocrine Connections, 2022-08, Vol.11 (8), p.1-13</ispartof><rights>The authors</rights><rights>The authors 2022 The authors</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b4004-662b68ca81c7374aa9b508dbc7bca3caee30ed9992b6fcc5e5e68bf36e21c0e63</citedby><cites>FETCH-LOGICAL-b4004-662b68ca81c7374aa9b508dbc7bca3caee30ed9992b6fcc5e5e68bf36e21c0e63</cites><orcidid>0000-0003-0376-4682</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346337/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9346337/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53769,53771</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/35904237$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zheng, Huifei Sophia</creatorcontrib><creatorcontrib>Daniel, Jeffrey G</creatorcontrib><creatorcontrib>Salamat, Julia M</creatorcontrib><creatorcontrib>Mackay, Laci</creatorcontrib><creatorcontrib>Foradori, Chad D</creatorcontrib><creatorcontrib>Kemppainen, Robert J</creatorcontrib><creatorcontrib>Pondugula, Satyanarayana R</creatorcontrib><creatorcontrib>Tao, Ya-Xiong</creatorcontrib><creatorcontrib>Huang, Chen-Che Jeff</creatorcontrib><title>Early transcriptomic response of mouse adrenal gland and Y-1 cells to dexamethasone</title><title>Endocrine Connections</title><addtitle>Endocr Connect</addtitle><description>Glucocorticoids have short- and long-term effects on adrenal gland function and development. RNA sequencing (RNA-seq) was performed to identify early transcriptomic responses to the synthetic glucocorticoid, dexamethasone (Dex), in vitro and in vivo. In total, 1711 genes were differentially expressed in the adrenal glands of the 1-h Dex-treated mice. Among them, only 113 were also considered differentially expressed genes (DEGs) in murine adrenocortical Y-1 cells treated with Dex for 1 h. Gene ontology analysis showed that the upregulated DEGs in the adrenal gland of the 1-h Dex-treated mice were highly associated with the development of neuronal cells, suggesting the adrenal medulla had a rapid response to Dex. Interestingly, only 4.3% of Dex-responsive genes in the Y-1 cell line under Dex treatment for 1 h were differentially expressed under Dex treatment for 24 h. The heatmaps revealed that most early responsive DEGs in Y-1 cells during 1 h of treatment exhibited a transient response. The expression of these genes under treatment for 24 h returned to basal levels similar to that during control treatment. In , this research compared the rapid transcriptomic effects of Dex stimulation in vivo and in vitro. Notably, adrenocortical Y-1 cells had a transient early response to Dex treatment. Furthermore, the DEGs had a minimal overlap in the 1-h Dex-treated group in vivo and in vitro.</description><subject>adrenal gland</subject><subject>dexamethasone</subject><subject>glucocorticoids</subject><subject>transcriptome</subject><subject>y-1 cells</subject><issn>2049-3614</issn><issn>2049-3614</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNp9kU1rFTEUhgdRbKnd-ANkliKM5msyyUaQy1ULBRfqwlU4c3JymzIzuSZTsf_eXG8t7cZAyCF5eHI4b9O85Owt7yV7t910QnSMafWkORVM2U5qrp4-qE-a81KuWV2GayPZ8-ZE9pYpIYfT5usW8nTbrhmWgjnu1zRHbDOVfVoKtSm0c7qpBfhMC0ztboLFt4f9o-Mt0jSVdk2tp98w03oFJS30onkWYCp0fneeNd8_br9tPneXXz5dbD5cdqNiTHVai1EbBMNxkIMCsGPPjB9xGBEkApFk5K21FQuIPfWkzRikJsGRkZZnzcXR6xNcu32OM-RblyC6vxcp7xzkNeJEzugghTVm0GiVRzSi18EHzlWvMKCvrvdH1_5mnMkjLXUk0yPp45clXrld-uWsVFrKoQpe3wly-nlDZXVzLIf5wEJ1gk5oq42WNbOKvjmimFMpmcL9N5y5Q6huu3FCuEOoFX71sLF79F-EFWBHYIypYKztxRAR_uf8A1Q9rVM</recordid><startdate>20220801</startdate><enddate>20220801</enddate><creator>Zheng, Huifei Sophia</creator><creator>Daniel, Jeffrey G</creator><creator>Salamat, Julia M</creator><creator>Mackay, Laci</creator><creator>Foradori, Chad D</creator><creator>Kemppainen, Robert J</creator><creator>Pondugula, Satyanarayana R</creator><creator>Tao, Ya-Xiong</creator><creator>Huang, Chen-Che Jeff</creator><general>Bioscientifica Ltd</general><general>Bioscientifica</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-0376-4682</orcidid></search><sort><creationdate>20220801</creationdate><title>Early transcriptomic response of mouse adrenal gland and Y-1 cells to dexamethasone</title><author>Zheng, Huifei Sophia ; Daniel, Jeffrey G ; Salamat, Julia M ; Mackay, Laci ; Foradori, Chad D ; Kemppainen, Robert J ; Pondugula, Satyanarayana R ; Tao, Ya-Xiong ; Huang, Chen-Che Jeff</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b4004-662b68ca81c7374aa9b508dbc7bca3caee30ed9992b6fcc5e5e68bf36e21c0e63</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>adrenal gland</topic><topic>dexamethasone</topic><topic>glucocorticoids</topic><topic>transcriptome</topic><topic>y-1 cells</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zheng, Huifei Sophia</creatorcontrib><creatorcontrib>Daniel, Jeffrey G</creatorcontrib><creatorcontrib>Salamat, Julia M</creatorcontrib><creatorcontrib>Mackay, Laci</creatorcontrib><creatorcontrib>Foradori, Chad D</creatorcontrib><creatorcontrib>Kemppainen, Robert J</creatorcontrib><creatorcontrib>Pondugula, Satyanarayana R</creatorcontrib><creatorcontrib>Tao, Ya-Xiong</creatorcontrib><creatorcontrib>Huang, Chen-Che Jeff</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>Directory of Open Access Journals</collection><jtitle>Endocrine Connections</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zheng, Huifei Sophia</au><au>Daniel, Jeffrey G</au><au>Salamat, Julia M</au><au>Mackay, Laci</au><au>Foradori, Chad D</au><au>Kemppainen, Robert J</au><au>Pondugula, Satyanarayana R</au><au>Tao, Ya-Xiong</au><au>Huang, Chen-Che Jeff</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Early transcriptomic response of mouse adrenal gland and Y-1 cells to dexamethasone</atitle><jtitle>Endocrine Connections</jtitle><addtitle>Endocr Connect</addtitle><date>2022-08-01</date><risdate>2022</risdate><volume>11</volume><issue>8</issue><spage>1</spage><epage>13</epage><pages>1-13</pages><issn>2049-3614</issn><eissn>2049-3614</eissn><abstract>Glucocorticoids have short- and long-term effects on adrenal gland function and development. RNA sequencing (RNA-seq) was performed to identify early transcriptomic responses to the synthetic glucocorticoid, dexamethasone (Dex), in vitro and in vivo. In total, 1711 genes were differentially expressed in the adrenal glands of the 1-h Dex-treated mice. Among them, only 113 were also considered differentially expressed genes (DEGs) in murine adrenocortical Y-1 cells treated with Dex for 1 h. Gene ontology analysis showed that the upregulated DEGs in the adrenal gland of the 1-h Dex-treated mice were highly associated with the development of neuronal cells, suggesting the adrenal medulla had a rapid response to Dex. Interestingly, only 4.3% of Dex-responsive genes in the Y-1 cell line under Dex treatment for 1 h were differentially expressed under Dex treatment for 24 h. The heatmaps revealed that most early responsive DEGs in Y-1 cells during 1 h of treatment exhibited a transient response. The expression of these genes under treatment for 24 h returned to basal levels similar to that during control treatment. In , this research compared the rapid transcriptomic effects of Dex stimulation in vivo and in vitro. Notably, adrenocortical Y-1 cells had a transient early response to Dex treatment. Furthermore, the DEGs had a minimal overlap in the 1-h Dex-treated group in vivo and in vitro.</abstract><cop>England</cop><pub>Bioscientifica Ltd</pub><pmid>35904237</pmid><doi>10.1530/EC-22-0064</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0003-0376-4682</orcidid><oa>free_for_read</oa></addata></record> |
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title | Early transcriptomic response of mouse adrenal gland and Y-1 cells to dexamethasone |
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