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TAT gene polymorphism and its relationship with production traits in Muscovy ducks (Cairina Moschata)
In a previous study, the laying pattern of Muscovy duck was explored by macro-fitting the laying curve of Muscovy duck, and transcriptome sequencing technique of the ovarian tissues was used to screen the egg-related gene “TAT.” Moreover, recent results have shown that TAT is expressed in organs suc...
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Published in: | Poultry science 2023-05, Vol.102 (5), p.102551-102551, Article 102551 |
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description | In a previous study, the laying pattern of Muscovy duck was explored by macro-fitting the laying curve of Muscovy duck, and transcriptome sequencing technique of the ovarian tissues was used to screen the egg-related gene “TAT.” Moreover, recent results have shown that TAT is expressed in organs such as oviduct, ovary, and testis. The objective of this study is to examine the effect of TAT gene on egg production traits of Muscovy ducks. First, the expression levels of TAT gene in highest producing (HP) and lowest producing (LP) in 3 tissues related to reproduction were examined, and the results indicated that the expression of TAT gene in hypothalamus was significantly different between HP and LP groups. Then, 6 SNP loci (g. 120G>T, g, 122G>A, g, 254G> A, g. 270C >T, g, 312G>A, and g. 341C>A) were detected in TAT gene. Further, association analysis between the six SNP loci of TAT gene and egg production traits of 652 individual Muscovy ducks was done. The results showed that g. 254G>A and g. 270C>T were significantly correlated (P < 0.05 or 0.001) with the egg production traits of Muscovy ducks. This study elucidated the molecular mechanism that TAT gene might be regulating the egg production traits of Muscovy ducks. |
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The objective of this study is to examine the effect of TAT gene on egg production traits of Muscovy ducks. First, the expression levels of TAT gene in highest producing (HP) and lowest producing (LP) in 3 tissues related to reproduction were examined, and the results indicated that the expression of TAT gene in hypothalamus was significantly different between HP and LP groups. Then, 6 SNP loci (g. 120G>T, g, 122G>A, g, 254G> A, g. 270C >T, g, 312G>A, and g. 341C>A) were detected in TAT gene. Further, association analysis between the six SNP loci of TAT gene and egg production traits of 652 individual Muscovy ducks was done. The results showed that g. 254G>A and g. 270C>T were significantly correlated (P < 0.05 or 0.001) with the egg production traits of Muscovy ducks. This study elucidated the molecular mechanism that TAT gene might be regulating the egg production traits of Muscovy ducks.</description><identifier>ISSN: 0032-5791</identifier><identifier>EISSN: 1525-3171</identifier><identifier>DOI: 10.1016/j.psj.2023.102551</identifier><identifier>PMID: 36972669</identifier><language>eng</language><publisher>England: Elsevier Inc</publisher><subject>Animals ; association analysis ; Cairina moschata ; Chickens - genetics ; Ducks - physiology ; egg production ; egg production traits ; Female ; genes ; Genes, tat ; genetic polymorphism ; hypothalamus ; Male ; Muscovy ; Muscovy ducks ; oviducts ; Phenotype ; PHYSIOLOGY AND REPRODUCTION ; Polymorphism, Genetic ; TAT gene ; testes ; transcriptome ; variation</subject><ispartof>Poultry science, 2023-05, Vol.102 (5), p.102551-102551, Article 102551</ispartof><rights>2023 The Authors</rights><rights>Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.</rights><rights>2023 The Authors 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c503t-298a9a3eb38b42942f214057121c062368cfc378b0732a70cb76d63ffc9a2e5a3</cites><orcidid>0000-0003-3934-3820</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC10050636/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0032579123000755$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>230,314,724,777,781,882,3536,27905,27906,45761,53772,53774</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/36972669$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ju, Xing</creatorcontrib><creatorcontrib>Wang, Zhijun</creatorcontrib><creatorcontrib>Cai, Danfeng</creatorcontrib><creatorcontrib>Xu, Haiping</creatorcontrib><creatorcontrib>Bello, Semiu Folaniyi</creatorcontrib><creatorcontrib>Zhang, Siyu</creatorcontrib><creatorcontrib>Zhu, Weijian</creatorcontrib><creatorcontrib>Ji, Congliang</creatorcontrib><creatorcontrib>Nie, Qinghua</creatorcontrib><title>TAT gene polymorphism and its relationship with production traits in Muscovy ducks (Cairina Moschata)</title><title>Poultry science</title><addtitle>Poult Sci</addtitle><description>In a previous study, the laying pattern of Muscovy duck was explored by macro-fitting the laying curve of Muscovy duck, and transcriptome sequencing technique of the ovarian tissues was used to screen the egg-related gene “TAT.” Moreover, recent results have shown that TAT is expressed in organs such as oviduct, ovary, and testis. The objective of this study is to examine the effect of TAT gene on egg production traits of Muscovy ducks. First, the expression levels of TAT gene in highest producing (HP) and lowest producing (LP) in 3 tissues related to reproduction were examined, and the results indicated that the expression of TAT gene in hypothalamus was significantly different between HP and LP groups. Then, 6 SNP loci (g. 120G>T, g, 122G>A, g, 254G> A, g. 270C >T, g, 312G>A, and g. 341C>A) were detected in TAT gene. Further, association analysis between the six SNP loci of TAT gene and egg production traits of 652 individual Muscovy ducks was done. The results showed that g. 254G>A and g. 270C>T were significantly correlated (P < 0.05 or 0.001) with the egg production traits of Muscovy ducks. This study elucidated the molecular mechanism that TAT gene might be regulating the egg production traits of Muscovy ducks.</description><subject>Animals</subject><subject>association analysis</subject><subject>Cairina moschata</subject><subject>Chickens - genetics</subject><subject>Ducks - physiology</subject><subject>egg production</subject><subject>egg production traits</subject><subject>Female</subject><subject>genes</subject><subject>Genes, tat</subject><subject>genetic polymorphism</subject><subject>hypothalamus</subject><subject>Male</subject><subject>Muscovy</subject><subject>Muscovy ducks</subject><subject>oviducts</subject><subject>Phenotype</subject><subject>PHYSIOLOGY AND REPRODUCTION</subject><subject>Polymorphism, Genetic</subject><subject>TAT gene</subject><subject>testes</subject><subject>transcriptome</subject><subject>variation</subject><issn>0032-5791</issn><issn>1525-3171</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNqFkktvEzEUhS0EomngB7BBXpZFgh_jl1igKqJQqRWbsLY8njuJw2Q82JOg_HscplR0AyvL95776R77IPSGkiUlVL7fLYe8WzLCeLkzIegzNKOCiQWnij5HM0I4Wwhl6AW6zHlHCKNSqpfogkujmJRmhmB9vcYb6AEPsTvtYxq2Ie-x6xscxowTdG4Msc_bMOCfYdziIcXm4M81PCZ31oQe3x-yj8cTLp3vGV-tXEihd_g-Zr91o3v3Cr1oXZfh9cM5R99uPq1XXxZ3Xz_frq7vFl4QPi6Y0c44DjXXdcVMxVpGKyIUZdQTybjUvvVc6ZoozpwivlaykbxtvXEMhONzdDtxm-h2dkhh79LJRhfs70JMG-vSGHwHVmsKDQdJK00rUKoGrcAw3jatkErUhfVxYg2Heg-Nh7747Z5An3b6sLWbeLSUEEEkl4Vw9UBI8ccB8mj3IXvoOtdDPGTLNK8Yqwwj_5cqw40WuhifIzpJfYo5J2gfV6LEnmNhi_O8s-dY2CkWZebt314eJ_7koAg-TAIov3MMkGz2AXoPTUjgx_J84R_4X-bTyGA</recordid><startdate>20230501</startdate><enddate>20230501</enddate><creator>Ju, Xing</creator><creator>Wang, Zhijun</creator><creator>Cai, Danfeng</creator><creator>Xu, Haiping</creator><creator>Bello, Semiu Folaniyi</creator><creator>Zhang, Siyu</creator><creator>Zhu, Weijian</creator><creator>Ji, Congliang</creator><creator>Nie, Qinghua</creator><general>Elsevier Inc</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0003-3934-3820</orcidid></search><sort><creationdate>20230501</creationdate><title>TAT gene polymorphism and its relationship with production traits in Muscovy ducks (Cairina Moschata)</title><author>Ju, Xing ; Wang, Zhijun ; Cai, Danfeng ; Xu, Haiping ; Bello, Semiu Folaniyi ; Zhang, Siyu ; Zhu, Weijian ; Ji, Congliang ; Nie, Qinghua</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c503t-298a9a3eb38b42942f214057121c062368cfc378b0732a70cb76d63ffc9a2e5a3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Animals</topic><topic>association analysis</topic><topic>Cairina moschata</topic><topic>Chickens - genetics</topic><topic>Ducks - physiology</topic><topic>egg production</topic><topic>egg production traits</topic><topic>Female</topic><topic>genes</topic><topic>Genes, tat</topic><topic>genetic polymorphism</topic><topic>hypothalamus</topic><topic>Male</topic><topic>Muscovy</topic><topic>Muscovy ducks</topic><topic>oviducts</topic><topic>Phenotype</topic><topic>PHYSIOLOGY AND REPRODUCTION</topic><topic>Polymorphism, Genetic</topic><topic>TAT gene</topic><topic>testes</topic><topic>transcriptome</topic><topic>variation</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ju, Xing</creatorcontrib><creatorcontrib>Wang, Zhijun</creatorcontrib><creatorcontrib>Cai, Danfeng</creatorcontrib><creatorcontrib>Xu, Haiping</creatorcontrib><creatorcontrib>Bello, Semiu Folaniyi</creatorcontrib><creatorcontrib>Zhang, Siyu</creatorcontrib><creatorcontrib>Zhu, Weijian</creatorcontrib><creatorcontrib>Ji, Congliang</creatorcontrib><creatorcontrib>Nie, Qinghua</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Poultry science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ju, Xing</au><au>Wang, Zhijun</au><au>Cai, Danfeng</au><au>Xu, Haiping</au><au>Bello, Semiu Folaniyi</au><au>Zhang, Siyu</au><au>Zhu, Weijian</au><au>Ji, Congliang</au><au>Nie, Qinghua</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>TAT gene polymorphism and its relationship with production traits in Muscovy ducks (Cairina Moschata)</atitle><jtitle>Poultry science</jtitle><addtitle>Poult Sci</addtitle><date>2023-05-01</date><risdate>2023</risdate><volume>102</volume><issue>5</issue><spage>102551</spage><epage>102551</epage><pages>102551-102551</pages><artnum>102551</artnum><issn>0032-5791</issn><eissn>1525-3171</eissn><abstract>In a previous study, the laying pattern of Muscovy duck was explored by macro-fitting the laying curve of Muscovy duck, and transcriptome sequencing technique of the ovarian tissues was used to screen the egg-related gene “TAT.” Moreover, recent results have shown that TAT is expressed in organs such as oviduct, ovary, and testis. The objective of this study is to examine the effect of TAT gene on egg production traits of Muscovy ducks. First, the expression levels of TAT gene in highest producing (HP) and lowest producing (LP) in 3 tissues related to reproduction were examined, and the results indicated that the expression of TAT gene in hypothalamus was significantly different between HP and LP groups. Then, 6 SNP loci (g. 120G>T, g, 122G>A, g, 254G> A, g. 270C >T, g, 312G>A, and g. 341C>A) were detected in TAT gene. Further, association analysis between the six SNP loci of TAT gene and egg production traits of 652 individual Muscovy ducks was done. The results showed that g. 254G>A and g. 270C>T were significantly correlated (P < 0.05 or 0.001) with the egg production traits of Muscovy ducks. This study elucidated the molecular mechanism that TAT gene might be regulating the egg production traits of Muscovy ducks.</abstract><cop>England</cop><pub>Elsevier Inc</pub><pmid>36972669</pmid><doi>10.1016/j.psj.2023.102551</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0003-3934-3820</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Animals association analysis Cairina moschata Chickens - genetics Ducks - physiology egg production egg production traits Female genes Genes, tat genetic polymorphism hypothalamus Male Muscovy Muscovy ducks oviducts Phenotype PHYSIOLOGY AND REPRODUCTION Polymorphism, Genetic TAT gene testes transcriptome variation |
title | TAT gene polymorphism and its relationship with production traits in Muscovy ducks (Cairina Moschata) |
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