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Sexual dimorphism of early transcriptional reprogramming in degenerating peripheral nerves
Sexual dimorphism is a powerful yet understudied factor that influences the timing and efficiency of gene regulation in axonal injury and repair processes in the peripheral nervous system. Here, we identified common and distinct biological processes in female and male degenerating (distal) nerve stu...
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Published in: | Frontiers in molecular neuroscience 2022-10, Vol.15, p.1029278-1029278 |
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description | Sexual dimorphism is a powerful yet understudied factor that influences the timing and efficiency of gene regulation in axonal injury and repair processes in the peripheral nervous system. Here, we identified common and distinct biological processes in female and male degenerating (distal) nerve stumps based on a snapshot of transcriptional reprogramming 24 h after axotomy reflecting the onset of early phase Wallerian degeneration (WD). Females exhibited transcriptional downregulation of a larger number of genes than males. RhoGDI, ERBB, and ERK5 signaling pathways increased activity in both sexes. Males upregulated genes and canonical pathways that exhibited robust baseline expression in females in both axotomized and sham nerves, including signaling pathways controlled by neuregulin and nerve growth factors. Cholesterol biosynthesis, reelin signaling, and synaptogenesis signaling pathways were downregulated in females. Signaling by Rho Family GTPases, cAMP-mediated signaling, and sulfated glycosaminoglycan biosynthesis were downregulated in both sexes. Estrogens potentially influenced sex-dependent injury response due to distinct regulation of estrogen receptor expression. A crosstalk of cytokines and growth hormones could promote sexually dimorphic transcriptional responses. We highlighted prospective regulatory activities due to protein phosphorylation, extracellular proteolysis, sex chromosome-specific expression, major urinary proteins (MUPs), and genes involved in thyroid hormone metabolism. Combined with our earlier findings in the corresponding dorsal root ganglia (DRG) and regenerating (proximal) nerve stumps, sex-specific and universal early phase molecular triggers of WD enrich our knowledge of transcriptional regulation in peripheral nerve injury and repair. |
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Here, we identified common and distinct biological processes in female and male degenerating (distal) nerve stumps based on a snapshot of transcriptional reprogramming 24 h after axotomy reflecting the onset of early phase Wallerian degeneration (WD). Females exhibited transcriptional downregulation of a larger number of genes than males. RhoGDI, ERBB, and ERK5 signaling pathways increased activity in both sexes. Males upregulated genes and canonical pathways that exhibited robust baseline expression in females in both axotomized and sham nerves, including signaling pathways controlled by neuregulin and nerve growth factors. Cholesterol biosynthesis, reelin signaling, and synaptogenesis signaling pathways were downregulated in females. Signaling by Rho Family GTPases, cAMP-mediated signaling, and sulfated glycosaminoglycan biosynthesis were downregulated in both sexes. Estrogens potentially influenced sex-dependent injury response due to distinct regulation of estrogen receptor expression. A crosstalk of cytokines and growth hormones could promote sexually dimorphic transcriptional responses. We highlighted prospective regulatory activities due to protein phosphorylation, extracellular proteolysis, sex chromosome-specific expression, major urinary proteins (MUPs), and genes involved in thyroid hormone metabolism. Combined with our earlier findings in the corresponding dorsal root ganglia (DRG) and regenerating (proximal) nerve stumps, sex-specific and universal early phase molecular triggers of WD enrich our knowledge of transcriptional regulation in peripheral nerve injury and repair.</description><identifier>ISSN: 1662-5099</identifier><identifier>EISSN: 1662-5099</identifier><identifier>DOI: 10.3389/fnmol.2022.1029278</identifier><language>eng</language><publisher>Lausanne: Frontiers Research Foundation</publisher><subject>Axotomy ; Biosynthesis ; Cholesterol ; Chromosomes ; Cytokines ; Dorsal root ganglia ; ErbB protein ; Estrogen receptors ; Females ; Gender differences ; Gene expression ; Gene regulation ; Genomes ; Glycosaminoglycans ; Growth factors ; Growth hormones ; Kinases ; Males ; Metabolism ; Mus musculus ; Nervous system ; Neuregulin ; Neurodegeneration ; Neuroscience ; peripheral nerve injury ; Peripheral nerves ; Phosphorylation ; Proteins ; Proteolysis ; Reelin protein ; RNA-seq ; Sexes ; Sexual dimorphism ; Signal transduction ; Stem cells ; Synaptogenesis ; Thyroid ; Transcription ; Wallerian degeneration</subject><ispartof>Frontiers in molecular neuroscience, 2022-10, Vol.15, p.1029278-1029278</ispartof><rights>2022. This work is licensed under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>Copyright © 2022 Chernov and Shubayev. 2022 Chernov and Shubayev</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c354t-579cf7948fbfc6ac320f789ae778125121fd6e747da045d5dbae76076818744d3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2729266820/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2729266820?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,75096</link.rule.ids></links><search><creatorcontrib>Chernov, Andrei V.</creatorcontrib><creatorcontrib>Shubayev, Veronica I.</creatorcontrib><title>Sexual dimorphism of early transcriptional reprogramming in degenerating peripheral nerves</title><title>Frontiers in molecular neuroscience</title><description>Sexual dimorphism is a powerful yet understudied factor that influences the timing and efficiency of gene regulation in axonal injury and repair processes in the peripheral nervous system. Here, we identified common and distinct biological processes in female and male degenerating (distal) nerve stumps based on a snapshot of transcriptional reprogramming 24 h after axotomy reflecting the onset of early phase Wallerian degeneration (WD). Females exhibited transcriptional downregulation of a larger number of genes than males. RhoGDI, ERBB, and ERK5 signaling pathways increased activity in both sexes. Males upregulated genes and canonical pathways that exhibited robust baseline expression in females in both axotomized and sham nerves, including signaling pathways controlled by neuregulin and nerve growth factors. Cholesterol biosynthesis, reelin signaling, and synaptogenesis signaling pathways were downregulated in females. Signaling by Rho Family GTPases, cAMP-mediated signaling, and sulfated glycosaminoglycan biosynthesis were downregulated in both sexes. Estrogens potentially influenced sex-dependent injury response due to distinct regulation of estrogen receptor expression. A crosstalk of cytokines and growth hormones could promote sexually dimorphic transcriptional responses. We highlighted prospective regulatory activities due to protein phosphorylation, extracellular proteolysis, sex chromosome-specific expression, major urinary proteins (MUPs), and genes involved in thyroid hormone metabolism. Combined with our earlier findings in the corresponding dorsal root ganglia (DRG) and regenerating (proximal) nerve stumps, sex-specific and universal early phase molecular triggers of WD enrich our knowledge of transcriptional regulation in peripheral nerve injury and repair.</description><subject>Axotomy</subject><subject>Biosynthesis</subject><subject>Cholesterol</subject><subject>Chromosomes</subject><subject>Cytokines</subject><subject>Dorsal root ganglia</subject><subject>ErbB protein</subject><subject>Estrogen receptors</subject><subject>Females</subject><subject>Gender differences</subject><subject>Gene expression</subject><subject>Gene regulation</subject><subject>Genomes</subject><subject>Glycosaminoglycans</subject><subject>Growth factors</subject><subject>Growth hormones</subject><subject>Kinases</subject><subject>Males</subject><subject>Metabolism</subject><subject>Mus musculus</subject><subject>Nervous system</subject><subject>Neuregulin</subject><subject>Neurodegeneration</subject><subject>Neuroscience</subject><subject>peripheral nerve injury</subject><subject>Peripheral nerves</subject><subject>Phosphorylation</subject><subject>Proteins</subject><subject>Proteolysis</subject><subject>Reelin protein</subject><subject>RNA-seq</subject><subject>Sexes</subject><subject>Sexual dimorphism</subject><subject>Signal transduction</subject><subject>Stem cells</subject><subject>Synaptogenesis</subject><subject>Thyroid</subject><subject>Transcription</subject><subject>Wallerian degeneration</subject><issn>1662-5099</issn><issn>1662-5099</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkcuLFDEQh4MouI7-A54avHiZMa_O4yLI4mNhwYN68RLSnUpPhu6kTboX978380B295RU1cdHUT-E3hK8Y0zpDz5OadxRTOmOYKqpVM_QFRGCblus9fMH_5foVSkHjAUVLbtCv3_A39WOjQtTyvM-lKlJvgGbx_tmyTaWPod5CSlWJsOc05DtNIU4NCE2DgaIkO1yrGeo5L5WY1N7d1BeoxfejgXeXN4N-vXl88_rb9vb719vrj_dbnvW8mXbSt17qbnyne-F7RnFXiptQUpFaEso8U6A5NJZzFvXuq6OBJZCESU5d2yDbs5el-zBzDlMNt-bZIM5NVIejM1L6EcwChj2Qtvq4Rwc0aA6z5QimndaWVVdH8-uee0mcD3EeoTxkfTxJIa9GdKd0YIrjnkVvL8IcvqzQlnMFEoP42gjpLUYKpnk4nT8DXr3BD2kNddDH6maoRCK4krRM9XnVEoG_38Zgs0xe3PK3hyzN5fs2T_fT6V6</recordid><startdate>20221027</startdate><enddate>20221027</enddate><creator>Chernov, Andrei V.</creator><creator>Shubayev, Veronica I.</creator><general>Frontiers Research Foundation</general><general>Frontiers Media S.A</general><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7XB</scope><scope>88I</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M2P</scope><scope>M7P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20221027</creationdate><title>Sexual dimorphism of early transcriptional reprogramming in degenerating peripheral nerves</title><author>Chernov, Andrei V. ; Shubayev, Veronica I.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c354t-579cf7948fbfc6ac320f789ae778125121fd6e747da045d5dbae76076818744d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>Axotomy</topic><topic>Biosynthesis</topic><topic>Cholesterol</topic><topic>Chromosomes</topic><topic>Cytokines</topic><topic>Dorsal root ganglia</topic><topic>ErbB protein</topic><topic>Estrogen receptors</topic><topic>Females</topic><topic>Gender differences</topic><topic>Gene expression</topic><topic>Gene regulation</topic><topic>Genomes</topic><topic>Glycosaminoglycans</topic><topic>Growth factors</topic><topic>Growth hormones</topic><topic>Kinases</topic><topic>Males</topic><topic>Metabolism</topic><topic>Mus musculus</topic><topic>Nervous system</topic><topic>Neuregulin</topic><topic>Neurodegeneration</topic><topic>Neuroscience</topic><topic>peripheral nerve injury</topic><topic>Peripheral nerves</topic><topic>Phosphorylation</topic><topic>Proteins</topic><topic>Proteolysis</topic><topic>Reelin protein</topic><topic>RNA-seq</topic><topic>Sexes</topic><topic>Sexual dimorphism</topic><topic>Signal transduction</topic><topic>Stem cells</topic><topic>Synaptogenesis</topic><topic>Thyroid</topic><topic>Transcription</topic><topic>Wallerian degeneration</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chernov, Andrei V.</creatorcontrib><creatorcontrib>Shubayev, Veronica I.</creatorcontrib><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Neurosciences Abstracts</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Science Database</collection><collection>Biological Science Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in molecular neuroscience</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chernov, Andrei V.</au><au>Shubayev, Veronica I.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Sexual dimorphism of early transcriptional reprogramming in degenerating peripheral nerves</atitle><jtitle>Frontiers in molecular neuroscience</jtitle><date>2022-10-27</date><risdate>2022</risdate><volume>15</volume><spage>1029278</spage><epage>1029278</epage><pages>1029278-1029278</pages><issn>1662-5099</issn><eissn>1662-5099</eissn><abstract>Sexual dimorphism is a powerful yet understudied factor that influences the timing and efficiency of gene regulation in axonal injury and repair processes in the peripheral nervous system. Here, we identified common and distinct biological processes in female and male degenerating (distal) nerve stumps based on a snapshot of transcriptional reprogramming 24 h after axotomy reflecting the onset of early phase Wallerian degeneration (WD). Females exhibited transcriptional downregulation of a larger number of genes than males. RhoGDI, ERBB, and ERK5 signaling pathways increased activity in both sexes. Males upregulated genes and canonical pathways that exhibited robust baseline expression in females in both axotomized and sham nerves, including signaling pathways controlled by neuregulin and nerve growth factors. Cholesterol biosynthesis, reelin signaling, and synaptogenesis signaling pathways were downregulated in females. Signaling by Rho Family GTPases, cAMP-mediated signaling, and sulfated glycosaminoglycan biosynthesis were downregulated in both sexes. Estrogens potentially influenced sex-dependent injury response due to distinct regulation of estrogen receptor expression. A crosstalk of cytokines and growth hormones could promote sexually dimorphic transcriptional responses. We highlighted prospective regulatory activities due to protein phosphorylation, extracellular proteolysis, sex chromosome-specific expression, major urinary proteins (MUPs), and genes involved in thyroid hormone metabolism. Combined with our earlier findings in the corresponding dorsal root ganglia (DRG) and regenerating (proximal) nerve stumps, sex-specific and universal early phase molecular triggers of WD enrich our knowledge of transcriptional regulation in peripheral nerve injury and repair.</abstract><cop>Lausanne</cop><pub>Frontiers Research Foundation</pub><doi>10.3389/fnmol.2022.1029278</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Axotomy Biosynthesis Cholesterol Chromosomes Cytokines Dorsal root ganglia ErbB protein Estrogen receptors Females Gender differences Gene expression Gene regulation Genomes Glycosaminoglycans Growth factors Growth hormones Kinases Males Metabolism Mus musculus Nervous system Neuregulin Neurodegeneration Neuroscience peripheral nerve injury Peripheral nerves Phosphorylation Proteins Proteolysis Reelin protein RNA-seq Sexes Sexual dimorphism Signal transduction Stem cells Synaptogenesis Thyroid Transcription Wallerian degeneration |
title | Sexual dimorphism of early transcriptional reprogramming in degenerating peripheral nerves |
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