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The complete mitochondrial genomes and phylogenetic analysis of two Chinese endemic cave fishes, Sinocyclocheilus guilinensis and S. huangtianensis (Cypriniformes: Cyprinidae)
is a group of cyprinid fishes endemic to China distributed in the karst region of southwest China. In this study, the complete mitogenomes of Ji, 1985 and Zhu et al. 2011 are reported and characterized. Both genomes contain 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and a non-coding control region,...
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Published in: | Mitochondrial DNA. Part B. Resources 2025, Vol.10 (3), p.167-172 |
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creator | Yao, Guojin He, You Li, Chenhong |
description | is a group of cyprinid fishes endemic to China distributed in the karst region of southwest China. In this study, the complete mitogenomes of
Ji, 1985 and
Zhu et al. 2011 are reported and characterized. Both genomes contain 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and a non-coding control region, with lengths of 16,576 bp and 16,578 bp, respectively. Phylogenetic analysis shows that
is the earliest branching species in the
group, while
and
are sister groups. These mitochondrial genomes are valuable for studying systematics of
. |
doi_str_mv | 10.1080/23802359.2025.2460776 |
format | article |
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Ji, 1985 and
Zhu et al. 2011 are reported and characterized. Both genomes contain 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and a non-coding control region, with lengths of 16,576 bp and 16,578 bp, respectively. Phylogenetic analysis shows that
is the earliest branching species in the
group, while
and
are sister groups. These mitochondrial genomes are valuable for studying systematics of
.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2025.2460776</identifier><identifier>PMID: 39912105</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>cave fishes ; Data Note ; mitochondrial genome ; Mitogenome Report ; molecular phylogeny ; S. huangtianensis ; Sinocyclocheilus guilinensis</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2025, Vol.10 (3), p.167-172</ispartof><rights>2025 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.</rights><rights>2025 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2025 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c2716-e5a74a005d351dac9ebc0061f9883e24402d5693c5349620b98a049751b336593</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11792122/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC11792122/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,4010,27900,27901,27902,36990,53766,53768</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/39912105$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yao, Guojin</creatorcontrib><creatorcontrib>He, You</creatorcontrib><creatorcontrib>Li, Chenhong</creatorcontrib><title>The complete mitochondrial genomes and phylogenetic analysis of two Chinese endemic cave fishes, Sinocyclocheilus guilinensis and S. huangtianensis (Cypriniformes: Cyprinidae)</title><title>Mitochondrial DNA. Part B. Resources</title><addtitle>Mitochondrial DNA B Resour</addtitle><description>is a group of cyprinid fishes endemic to China distributed in the karst region of southwest China. In this study, the complete mitogenomes of
Ji, 1985 and
Zhu et al. 2011 are reported and characterized. Both genomes contain 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and a non-coding control region, with lengths of 16,576 bp and 16,578 bp, respectively. Phylogenetic analysis shows that
is the earliest branching species in the
group, while
and
are sister groups. These mitochondrial genomes are valuable for studying systematics of
.</description><subject>cave fishes</subject><subject>Data Note</subject><subject>mitochondrial genome</subject><subject>Mitogenome Report</subject><subject>molecular phylogeny</subject><subject>S. huangtianensis</subject><subject>Sinocyclocheilus guilinensis</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2025</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkt9uFCEUxidGY5vaR9BwWRN35c8wgDfGbKo2aeJF6zVh4cwODQPrMFMzT-UrlnG3TXsFfOfw-8jhq6r3BK8JlvgzZRJTxtWaYsrXtG6wEM2r6nTRV0vh9bP9SXWe8x3GmDRMCCXeVidMKUIJ5qfVv9sOkE39PsAIqPdjsl2KbvAmoB3E1ENGJjq07-aQigCjt0UwYc4-o9Si8W9Cm85HyIAgOuhL3Zp7QK3PHeRP6MbHZGcbChh8mDLaTT6U_rgAFvTNGnWTibvRm6N6sZn3g4--TUPx_4KOR2fg47vqTWtChvPjelb9_n55u_m5uv7142rz7XplqSDNCrgRtcGYO8aJM1bB1mLckFZJyYDWNaaON4pZzmrVULxV0uBaCU62jDVcsbPq6sB1ydzpYt-bYdbJeP1fSMNOm6HMIoCWLQiOt5wJY2vGpXRm8SEtkwYa5wrr64G1n7Y9OAtxHEx4AX1Zib7Tu3SvCRGKEkoL4eJIGNKfCfKoe58thFAmlqasWfla2UgheGnlh1Y7pJwHaJ98CNZLePRjePQSHn0MT7n34fkjn249RoU9AOCgwwQ</recordid><startdate>2025</startdate><enddate>2025</enddate><creator>Yao, Guojin</creator><creator>He, You</creator><creator>Li, Chenhong</creator><general>Taylor & Francis</general><general>Taylor & Francis Group</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>2025</creationdate><title>The complete mitochondrial genomes and phylogenetic analysis of two Chinese endemic cave fishes, Sinocyclocheilus guilinensis and S. huangtianensis (Cypriniformes: Cyprinidae)</title><author>Yao, Guojin ; He, You ; Li, Chenhong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c2716-e5a74a005d351dac9ebc0061f9883e24402d5693c5349620b98a049751b336593</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2025</creationdate><topic>cave fishes</topic><topic>Data Note</topic><topic>mitochondrial genome</topic><topic>Mitogenome Report</topic><topic>molecular phylogeny</topic><topic>S. huangtianensis</topic><topic>Sinocyclocheilus guilinensis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Yao, Guojin</creatorcontrib><creatorcontrib>He, You</creatorcontrib><creatorcontrib>Li, Chenhong</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. Part B. Resources</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yao, Guojin</au><au>He, You</au><au>Li, Chenhong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The complete mitochondrial genomes and phylogenetic analysis of two Chinese endemic cave fishes, Sinocyclocheilus guilinensis and S. huangtianensis (Cypriniformes: Cyprinidae)</atitle><jtitle>Mitochondrial DNA. Part B. Resources</jtitle><addtitle>Mitochondrial DNA B Resour</addtitle><date>2025</date><risdate>2025</risdate><volume>10</volume><issue>3</issue><spage>167</spage><epage>172</epage><pages>167-172</pages><issn>2380-2359</issn><eissn>2380-2359</eissn><abstract>is a group of cyprinid fishes endemic to China distributed in the karst region of southwest China. In this study, the complete mitogenomes of
Ji, 1985 and
Zhu et al. 2011 are reported and characterized. Both genomes contain 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and a non-coding control region, with lengths of 16,576 bp and 16,578 bp, respectively. Phylogenetic analysis shows that
is the earliest branching species in the
group, while
and
are sister groups. These mitochondrial genomes are valuable for studying systematics of
.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>39912105</pmid><doi>10.1080/23802359.2025.2460776</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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source | Taylor & Francis Open Access; Publicly Available Content (ProQuest); PubMed Central |
subjects | cave fishes Data Note mitochondrial genome Mitogenome Report molecular phylogeny S. huangtianensis Sinocyclocheilus guilinensis |
title | The complete mitochondrial genomes and phylogenetic analysis of two Chinese endemic cave fishes, Sinocyclocheilus guilinensis and S. huangtianensis (Cypriniformes: Cyprinidae) |
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