Loading…
On the Use of Popular Basis Sets: Impact of the Intramolecular Basis Set Superposition Error
The magnitude of intramolecular basis set superposition error (BSSE) is revealed via computing systematic trends in molecular properties. This type of error is largely neglected in the study of the chemical properties of small molecules and it has historically been analyzed just in the study of larg...
Saved in:
Published in: | Molecules (Basel, Switzerland) Switzerland), 2019-10, Vol.24 (20), p.3810 |
---|---|
Main Authors: | , , , |
Format: | Article |
Language: | English |
Subjects: | |
Citations: | Items that this one cites Items that cite this one |
Online Access: | Get full text |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
cited_by | cdi_FETCH-LOGICAL-c493t-33163913edecbf18c0e91f6cea9394c2d96dbd0fd48d28501b8b139ab9fd18f73 |
---|---|
cites | cdi_FETCH-LOGICAL-c493t-33163913edecbf18c0e91f6cea9394c2d96dbd0fd48d28501b8b139ab9fd18f73 |
container_end_page | |
container_issue | 20 |
container_start_page | 3810 |
container_title | Molecules (Basel, Switzerland) |
container_volume | 24 |
creator | Vidal Vidal, Ángel de Vicente Poutás, Luis Carlos Nieto Faza, Olalla López, Carlos Silva |
description | The magnitude of intramolecular basis set superposition error (BSSE) is revealed via computing systematic trends in molecular properties. This type of error is largely neglected in the study of the chemical properties of small molecules and it has historically been analyzed just in the study of large molecules and processes dominated by non-covalent interactions (typically dimerization or molecular complexation and recognition events). In this work we try to provide proof of the broader prevalence of this error, which permeates all types of electronic structure calculations, particularly when employing insufficiently large basis sets. |
doi_str_mv | 10.3390/molecules24203810 |
format | article |
fullrecord | <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_9170fb914d824239ba9b3ceccc5f439d</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_9170fb914d824239ba9b3ceccc5f439d</doaj_id><sourcerecordid>2309495346</sourcerecordid><originalsourceid>FETCH-LOGICAL-c493t-33163913edecbf18c0e91f6cea9394c2d96dbd0fd48d28501b8b139ab9fd18f73</originalsourceid><addsrcrecordid>eNplkk1vFDEMhkcIRD_gB3BBI3HhsjSJM7NjDkilKnSlSkUqvSFF-XDaWc1MhmQGiX_fLLtU2_Zky378xnZcFO84-wSA7KQPHdm5oySkYNBw9qI45NldAJP4cs8_KI5SWjMmuOTV6-IAeF2JuobD4tfVUE53VN4kKoMvf4Rx7nQsv-rUpvKapvS5XPWjttMmuwFXwxT17uF9sLyeR4pjSO3UhqE8jzHEN8Urr7tEb3f2uLj5dv7z7GJxefV9dXZ6ubASYVpAbgeQAzmyxvPGMkLua0saAaUVDmtnHPNONk40FeOmMRxQG_SON34Jx8Vqq-uCXqsxtr2Of1XQrfoXCPFW6Ti1tiOFfMm8QS5dk5cGaDQasGStrbwEdFnry1ZrnE1PztJm3u6R6OPM0N6p2_BH1Q2IWsos8HEnEMPvmdKk-jZZ6jo9UJiTEsBQYgWyzuiHJ-g6zHHIq8oUQCVwCZgpvqVsDClF8g_NcKY2d6Ce3UGueb8_xUPF_4-He4I2sR0</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2333529739</pqid></control><display><type>article</type><title>On the Use of Popular Basis Sets: Impact of the Intramolecular Basis Set Superposition Error</title><source>PubMed (Medline)</source><source>Publicly Available Content Database</source><creator>Vidal Vidal, Ángel ; de Vicente Poutás, Luis Carlos ; Nieto Faza, Olalla ; López, Carlos Silva</creator><creatorcontrib>Vidal Vidal, Ángel ; de Vicente Poutás, Luis Carlos ; Nieto Faza, Olalla ; López, Carlos Silva</creatorcontrib><description>The magnitude of intramolecular basis set superposition error (BSSE) is revealed via computing systematic trends in molecular properties. This type of error is largely neglected in the study of the chemical properties of small molecules and it has historically been analyzed just in the study of large molecules and processes dominated by non-covalent interactions (typically dimerization or molecular complexation and recognition events). In this work we try to provide proof of the broader prevalence of this error, which permeates all types of electronic structure calculations, particularly when employing insufficiently large basis sets.</description><identifier>ISSN: 1420-3049</identifier><identifier>EISSN: 1420-3049</identifier><identifier>DOI: 10.3390/molecules24203810</identifier><identifier>PMID: 31652663</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Accuracy ; Affinity ; Base Pairing ; Basicity ; basis set errors ; bsse ; Chemical bonds ; Chemical Phenomena ; Chemical speciation ; Chemistry ; Computational Chemistry - methods ; Deoxyribonucleic acid ; Dimerization ; DNA ; Energy ; Entropy ; Errors ; Free energy ; Gibbs free energy ; Models, Molecular ; Normal Distribution ; Organic chemistry ; proton affinity ; Protons ; Quantum Theory ; relative energies ; Supramolecular compounds ; Vapor phases</subject><ispartof>Molecules (Basel, Switzerland), 2019-10, Vol.24 (20), p.3810</ispartof><rights>2019. This work is licensed under https://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2019 by the authors. 2019</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c493t-33163913edecbf18c0e91f6cea9394c2d96dbd0fd48d28501b8b139ab9fd18f73</citedby><cites>FETCH-LOGICAL-c493t-33163913edecbf18c0e91f6cea9394c2d96dbd0fd48d28501b8b139ab9fd18f73</cites><orcidid>0000-0001-8754-1341 ; 0000-0002-5876-5431 ; 0000-0003-4955-9844</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2333529739/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2333529739?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31652663$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Vidal Vidal, Ángel</creatorcontrib><creatorcontrib>de Vicente Poutás, Luis Carlos</creatorcontrib><creatorcontrib>Nieto Faza, Olalla</creatorcontrib><creatorcontrib>López, Carlos Silva</creatorcontrib><title>On the Use of Popular Basis Sets: Impact of the Intramolecular Basis Set Superposition Error</title><title>Molecules (Basel, Switzerland)</title><addtitle>Molecules</addtitle><description>The magnitude of intramolecular basis set superposition error (BSSE) is revealed via computing systematic trends in molecular properties. This type of error is largely neglected in the study of the chemical properties of small molecules and it has historically been analyzed just in the study of large molecules and processes dominated by non-covalent interactions (typically dimerization or molecular complexation and recognition events). In this work we try to provide proof of the broader prevalence of this error, which permeates all types of electronic structure calculations, particularly when employing insufficiently large basis sets.</description><subject>Accuracy</subject><subject>Affinity</subject><subject>Base Pairing</subject><subject>Basicity</subject><subject>basis set errors</subject><subject>bsse</subject><subject>Chemical bonds</subject><subject>Chemical Phenomena</subject><subject>Chemical speciation</subject><subject>Chemistry</subject><subject>Computational Chemistry - methods</subject><subject>Deoxyribonucleic acid</subject><subject>Dimerization</subject><subject>DNA</subject><subject>Energy</subject><subject>Entropy</subject><subject>Errors</subject><subject>Free energy</subject><subject>Gibbs free energy</subject><subject>Models, Molecular</subject><subject>Normal Distribution</subject><subject>Organic chemistry</subject><subject>proton affinity</subject><subject>Protons</subject><subject>Quantum Theory</subject><subject>relative energies</subject><subject>Supramolecular compounds</subject><subject>Vapor phases</subject><issn>1420-3049</issn><issn>1420-3049</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNplkk1vFDEMhkcIRD_gB3BBI3HhsjSJM7NjDkilKnSlSkUqvSFF-XDaWc1MhmQGiX_fLLtU2_Zky378xnZcFO84-wSA7KQPHdm5oySkYNBw9qI45NldAJP4cs8_KI5SWjMmuOTV6-IAeF2JuobD4tfVUE53VN4kKoMvf4Rx7nQsv-rUpvKapvS5XPWjttMmuwFXwxT17uF9sLyeR4pjSO3UhqE8jzHEN8Urr7tEb3f2uLj5dv7z7GJxefV9dXZ6ubASYVpAbgeQAzmyxvPGMkLua0saAaUVDmtnHPNONk40FeOmMRxQG_SON34Jx8Vqq-uCXqsxtr2Of1XQrfoXCPFW6Ti1tiOFfMm8QS5dk5cGaDQasGStrbwEdFnry1ZrnE1PztJm3u6R6OPM0N6p2_BH1Q2IWsos8HEnEMPvmdKk-jZZ6jo9UJiTEsBQYgWyzuiHJ-g6zHHIq8oUQCVwCZgpvqVsDClF8g_NcKY2d6Ce3UGueb8_xUPF_4-He4I2sR0</recordid><startdate>20191022</startdate><enddate>20191022</enddate><creator>Vidal Vidal, Ángel</creator><creator>de Vicente Poutás, Luis Carlos</creator><creator>Nieto Faza, Olalla</creator><creator>López, Carlos Silva</creator><general>MDPI AG</general><general>MDPI</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0001-8754-1341</orcidid><orcidid>https://orcid.org/0000-0002-5876-5431</orcidid><orcidid>https://orcid.org/0000-0003-4955-9844</orcidid></search><sort><creationdate>20191022</creationdate><title>On the Use of Popular Basis Sets: Impact of the Intramolecular Basis Set Superposition Error</title><author>Vidal Vidal, Ángel ; de Vicente Poutás, Luis Carlos ; Nieto Faza, Olalla ; López, Carlos Silva</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c493t-33163913edecbf18c0e91f6cea9394c2d96dbd0fd48d28501b8b139ab9fd18f73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Accuracy</topic><topic>Affinity</topic><topic>Base Pairing</topic><topic>Basicity</topic><topic>basis set errors</topic><topic>bsse</topic><topic>Chemical bonds</topic><topic>Chemical Phenomena</topic><topic>Chemical speciation</topic><topic>Chemistry</topic><topic>Computational Chemistry - methods</topic><topic>Deoxyribonucleic acid</topic><topic>Dimerization</topic><topic>DNA</topic><topic>Energy</topic><topic>Entropy</topic><topic>Errors</topic><topic>Free energy</topic><topic>Gibbs free energy</topic><topic>Models, Molecular</topic><topic>Normal Distribution</topic><topic>Organic chemistry</topic><topic>proton affinity</topic><topic>Protons</topic><topic>Quantum Theory</topic><topic>relative energies</topic><topic>Supramolecular compounds</topic><topic>Vapor phases</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Vidal Vidal, Ángel</creatorcontrib><creatorcontrib>de Vicente Poutás, Luis Carlos</creatorcontrib><creatorcontrib>Nieto Faza, Olalla</creatorcontrib><creatorcontrib>López, Carlos Silva</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Molecules (Basel, Switzerland)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Vidal Vidal, Ángel</au><au>de Vicente Poutás, Luis Carlos</au><au>Nieto Faza, Olalla</au><au>López, Carlos Silva</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>On the Use of Popular Basis Sets: Impact of the Intramolecular Basis Set Superposition Error</atitle><jtitle>Molecules (Basel, Switzerland)</jtitle><addtitle>Molecules</addtitle><date>2019-10-22</date><risdate>2019</risdate><volume>24</volume><issue>20</issue><spage>3810</spage><pages>3810-</pages><issn>1420-3049</issn><eissn>1420-3049</eissn><abstract>The magnitude of intramolecular basis set superposition error (BSSE) is revealed via computing systematic trends in molecular properties. This type of error is largely neglected in the study of the chemical properties of small molecules and it has historically been analyzed just in the study of large molecules and processes dominated by non-covalent interactions (typically dimerization or molecular complexation and recognition events). In this work we try to provide proof of the broader prevalence of this error, which permeates all types of electronic structure calculations, particularly when employing insufficiently large basis sets.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>31652663</pmid><doi>10.3390/molecules24203810</doi><orcidid>https://orcid.org/0000-0001-8754-1341</orcidid><orcidid>https://orcid.org/0000-0002-5876-5431</orcidid><orcidid>https://orcid.org/0000-0003-4955-9844</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1420-3049 |
ispartof | Molecules (Basel, Switzerland), 2019-10, Vol.24 (20), p.3810 |
issn | 1420-3049 1420-3049 |
language | eng |
recordid | cdi_doaj_primary_oai_doaj_org_article_9170fb914d824239ba9b3ceccc5f439d |
source | PubMed (Medline); Publicly Available Content Database |
subjects | Accuracy Affinity Base Pairing Basicity basis set errors bsse Chemical bonds Chemical Phenomena Chemical speciation Chemistry Computational Chemistry - methods Deoxyribonucleic acid Dimerization DNA Energy Entropy Errors Free energy Gibbs free energy Models, Molecular Normal Distribution Organic chemistry proton affinity Protons Quantum Theory relative energies Supramolecular compounds Vapor phases |
title | On the Use of Popular Basis Sets: Impact of the Intramolecular Basis Set Superposition Error |
url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-30T14%3A41%3A27IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=On%20the%20Use%20of%20Popular%20Basis%20Sets:%20Impact%20of%20the%20Intramolecular%20Basis%20Set%20Superposition%20Error&rft.jtitle=Molecules%20(Basel,%20Switzerland)&rft.au=Vidal%20Vidal,%20%C3%81ngel&rft.date=2019-10-22&rft.volume=24&rft.issue=20&rft.spage=3810&rft.pages=3810-&rft.issn=1420-3049&rft.eissn=1420-3049&rft_id=info:doi/10.3390/molecules24203810&rft_dat=%3Cproquest_doaj_%3E2309495346%3C/proquest_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c493t-33163913edecbf18c0e91f6cea9394c2d96dbd0fd48d28501b8b139ab9fd18f73%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2333529739&rft_id=info:pmid/31652663&rfr_iscdi=true |