Evaluation and Validation of Reference Genes for Gene Expression Analysis Using qRT-PCR in the Sugarcane Stem Borer Chilo sacchariphagus (Lepidoptera: Pyralidae)

• Published in: Insects (Basel, Switzerland) Switzerland), 2024-08, Vol.15 (8), p.594
• Main Authors: Wang, Zhixiong, Shang, Xiankun, Wei, Jili, Tian, Xiaoli, Liu, Yi, Zhang, Guohui
• Format: Article
• Language: English
• Subjects: Algorithms; Borers; Butterflies & moths; Chilo sacchariphagus; Dehydrogenases; Economic importance; Efficiency; Environmental aspects; Females; Gene expression; gene expression analysis; Genes; Genetic engineering; Identification and classification; Lepidoptera; Males; Molecular modelling; Pests; Pheromones; Physiological aspects; Physiological responses; Physiology; Polymerase chain reaction; Proteins; Pyralidae; Real time; real-time quantitative PCR; reference genes; Reverse transcription; Stability; Sugarcane; Temperature; Thorax; Transcription factors
• ISSN: 2075-4450; 2075-4450
• DOI: 10.3390/insects15080594

(Lepidoptera: Pyralidae) is an economically important sugarcane pest. Although numerous studies were conducted on the physiological responses in , little is known regarding the genes regulating these physiological processes. Gene expression analysis by qRT-PCR can offer a significant indication for functional gene studies. To our knowledge, the reference genes of have not been screened or evaluated, which hinders the functional gene study. In the present study, the stability of seven reference genes ( , , , , , , and ) was evaluated in under different experimental conditions, including tissues (antenna, head, thorax, abdomen, leg, and wing), temperatures (4 °C, 25 °C, and 37 °C) and sexes (male and female), through RefFinder, which integrates four algorithms (Normfinder, BestKeeper, ΔCt method, and geNorm). The findings suggested that the combination of and is ideal to analyze gene expressions in different tissues and at distinct temperatures, and and were suitable reference genes for comparing gene expressions between sexes. Finally, the expression profiles of gene were evaluated, and the outcomes further confirm the importance of selecting fitting reference genes for normalization of qRT-PCR data. This study represents the first kind in screening out suitable reference genes for gene expression analysis in . Information from this study is poised to galvanize future inquiry into the gene expression of , an economically important pest of sugarcane.