Dysregulation of microRNAs and tRNA-derived ncRNAs in mesothelial and mesothelioma cell lines after asbestiform fiber exposure

• Published in: Scientific reports 2022-06, Vol.12 (1), p.9181-21, Article 9181
• Main Authors: Filetti, Veronica, La Ferlita, Alessandro, Di Maria, Antonio, Cardile, Venera, Graziano, Adriana C. E., Rapisarda, Venerando, Ledda, Caterina, Pulvirenti, Alfredo, Loreto, Carla
• Format: Article
• Language: English
• Subjects: 631/114; 631/67; 692/1537; 692/53; Biopsy; Cell Line; Dietary Fiber; Fibers; Humanities and Social Sciences; Humans; Mesothelioma; Mesothelioma - metabolism; Mesothelioma, Malignant; Metabolic pathways; MicroRNAs; MicroRNAs - genetics; MicroRNAs - metabolism; miRNA; multidisciplinary; Non-coding RNA; Respiratory diseases; RNA, Transfer - genetics; RNA, Untranslated - genetics; Science; Science (multidisciplinary); Transcriptomes; Transfer RNA; tRNA; Tumor cells
• ISSN: 2045-2322; 2045-2322
• DOI: 10.1038/s41598-022-13044-0

Experimental evidence demonstrated that fluoro-edenite (FE) can develop chronic respiratory diseases and elicit carcinogenic effects. Environmental exposure to FE fibers is correlated with malignant pleural mesothelioma (MPM). An early diagnosis of MPM, and a comprehensive health monitoring of the patients exposed to FE fibers are two clinical issues that may be solved by the identification of specific biomarkers. We reported the microRNA (miRNA) and transfer RNA-derived non coding RNA (tRNA-derived ncRNA) transcriptome in human normal mesothelial and malignant mesothelioma cell lines exposed or not exposed to several concentration FE fibers. Furthermore, an interactive mesothelioma-based network was derived by using NetME tool. In untreated condition, the expression of miRNAs and tRNA-derived ncRNAs in tumor cells was significantly different with respect to non-tumor samples. Moreover, interesting and significant changes were found after the exposure of both cells lines to FE fibers. The network-based pathway analysis showed several signaling and metabolic pathways potentially involved in the pathogenesis of MPM. From papers analyzed by NetME, it is clear that many miRNAs can positively or negatively influence various pathways involved in MPM. For the first time, the analysis of tRNA-derived ncRNAs molecules in the context of mesothelioma has been made by using in vitro systems. Further studies will be designed to test and validate their diagnostic potential in high-risk individuals' liquid biopsies.