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Hydrangea arborescens 'Annabelle' Flower Formation and Flowering in the Current Year
The perennial woody plant 'Annabelle' is of great research value due to its unique mechanism of flower development that occurs in the current year, resulting in decorative flowers that can be enjoyed for a relatively long period of time. However, the mechanisms underlying the regulation of...
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Published in: | Plants (Basel) 2023-12, Vol.12 (24), p.4103 |
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description | The perennial woody plant
'Annabelle' is of great research value due to its unique mechanism of flower development that occurs in the current year, resulting in decorative flowers that can be enjoyed for a relatively long period of time. However, the mechanisms underlying the regulation of current-year flower development in
'Annabelle' are still not fully understood. In this study, we conducted an associated analysis to explore the core regulating network in
.
'Annabelle' by combining phenological observations, physiological assays, and transcriptome comparisons across seven flower developmental stages. Through this analysis, we constructed a gene co-expression network (GCN) based on the highest reciprocal rank (HRR), using 509 differentially expressed genes (DEGs) identified from seven flowering-related pathways, as well as the biosynthesis of eight flowering-related phytohormones and signal transduction in the transcriptomic analysis. According to the analysis of the GCN, we identified 14 key genes with the highest functional connectivity that played critical roles in specific development stages. We confirmed that 135 transcription factors (AP2/ERF, bHLH, CO-like, GRAS, MIKC, SBP, WRKY) were highly co-expressed with the 14 key genes, indicating their close associations with the development of current-year flowers. We further proposed a hypothetical model of a gene regulatory network for the development of the whole flower. This model suggested that the photoperiod, aging, and gibberellin pathways, along with the phytohormones abscisic acid (ABA), gibberellin (GA), brassinosteroid (BR), and jasmonic acid (JA), work synergistically to promote the floral transition. Additionally, auxin, GA, JA, ABA, and salicylic acid (SA) regulated the blooming process by involving the circadian clock. Cytokinin (CTK), ethylene (ETH), and SA were key regulators that affected flower senescence. Additionally, several floral integrators (
,
,
,
,
,
, etc.) were dominant contributors to the development of
.
flowers. Overall, this research provides a comprehensive understanding of the dynamic mechanism underlying the entire process of current-year flower development, thereby offering valuable insights for further studies on the flower development of
'Annabelle'. |
doi_str_mv | 10.3390/plants12244103 |
format | article |
fullrecord | <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_9d5036b7d50440f984e6ece625d17d49</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_9d5036b7d50440f984e6ece625d17d49</doaj_id><sourcerecordid>2904848870</sourcerecordid><originalsourceid>FETCH-LOGICAL-c440t-76ae4d68b7e3d3915569dbc8893f20c7039d0edbabb5a24ec02481520a5fcf153</originalsourceid><addsrcrecordid>eNpdkk1PGzEQhleoVUGUa4_IUg_0EurPtX2qUNQAElIvcOBkza5nw0YbO7V3qfj3dUiKSC1LY41fP7bfmar6wuilEJZ-3wwQxsw4l5JRcVSdcM7FTGupP7xbH1dnOa9oGaZMVn-qjoVhkkpBT6r7mxefICwRCKQmJswthkwurkKABocBL8hiiH8wkUVMaxj7GAgEv0_2YUn6QMYnJPMpJQwjeURIn6uPHQwZz_bxtHpY_Lyf38zufl3fzq_uZq2UdJzpGlD62jQahReWKVVb37TGWNFx2moqrKfoG2gaBVxiS7k0THEKqms7psRpdbvj-ggrt0n9GtKLi9C710RMSwdp7NsBnfWKirrRJZS7O2sk1thizZVn2ktbWD92rM3UrNEXF8YEwwH0cCf0T24Znx2jWppSgkL4tiek-HvCPLp1X9wcSpEwTtlxS5Xipq5pkX79T7qKUwrFq61KGmmM3qoud6o2xZwTdm-vYdRtG8AdNkA5cP7-D2_yf-UWfwFGs6vg</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2904848870</pqid></control><display><type>article</type><title>Hydrangea arborescens 'Annabelle' Flower Formation and Flowering in the Current Year</title><source>PMC (PubMed Central)</source><source>Publicly Available Content (ProQuest)</source><creator>Huang, Xiaoxu ; Lyu, Tong ; Li, Zheng ; Lyu, Yingmin</creator><creatorcontrib>Huang, Xiaoxu ; Lyu, Tong ; Li, Zheng ; Lyu, Yingmin</creatorcontrib><description>The perennial woody plant
'Annabelle' is of great research value due to its unique mechanism of flower development that occurs in the current year, resulting in decorative flowers that can be enjoyed for a relatively long period of time. However, the mechanisms underlying the regulation of current-year flower development in
'Annabelle' are still not fully understood. In this study, we conducted an associated analysis to explore the core regulating network in
.
'Annabelle' by combining phenological observations, physiological assays, and transcriptome comparisons across seven flower developmental stages. Through this analysis, we constructed a gene co-expression network (GCN) based on the highest reciprocal rank (HRR), using 509 differentially expressed genes (DEGs) identified from seven flowering-related pathways, as well as the biosynthesis of eight flowering-related phytohormones and signal transduction in the transcriptomic analysis. According to the analysis of the GCN, we identified 14 key genes with the highest functional connectivity that played critical roles in specific development stages. We confirmed that 135 transcription factors (AP2/ERF, bHLH, CO-like, GRAS, MIKC, SBP, WRKY) were highly co-expressed with the 14 key genes, indicating their close associations with the development of current-year flowers. We further proposed a hypothetical model of a gene regulatory network for the development of the whole flower. This model suggested that the photoperiod, aging, and gibberellin pathways, along with the phytohormones abscisic acid (ABA), gibberellin (GA), brassinosteroid (BR), and jasmonic acid (JA), work synergistically to promote the floral transition. Additionally, auxin, GA, JA, ABA, and salicylic acid (SA) regulated the blooming process by involving the circadian clock. Cytokinin (CTK), ethylene (ETH), and SA were key regulators that affected flower senescence. Additionally, several floral integrators (
,
,
,
,
,
, etc.) were dominant contributors to the development of
.
flowers. Overall, this research provides a comprehensive understanding of the dynamic mechanism underlying the entire process of current-year flower development, thereby offering valuable insights for further studies on the flower development of
'Annabelle'.</description><identifier>ISSN: 2223-7747</identifier><identifier>EISSN: 2223-7747</identifier><identifier>DOI: 10.3390/plants12244103</identifier><identifier>PMID: 38140430</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Abscisic acid ; Biosynthesis ; Circadian rhythms ; Cold ; current-year flower development ; Cytokinins ; Developmental stages ; Flowering ; Flowers ; Flowers & plants ; gene co-expression network ; Gene expression ; Genes ; Gibberellins ; Hormones ; Hydrangea arborescens ; Jasmonic acid ; Morphogenesis ; Morphology ; phytohormone ; Phytohormones ; Salicylic acid ; Senescence ; Signal transduction ; Transcription factors ; transcriptome (RNA-seq) ; Transcriptomes ; Transcriptomics ; Woody plants</subject><ispartof>Plants (Basel), 2023-12, Vol.12 (24), p.4103</ispartof><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 by the authors. 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c440t-76ae4d68b7e3d3915569dbc8893f20c7039d0edbabb5a24ec02481520a5fcf153</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2904848870/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2904848870?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/38140430$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Huang, Xiaoxu</creatorcontrib><creatorcontrib>Lyu, Tong</creatorcontrib><creatorcontrib>Li, Zheng</creatorcontrib><creatorcontrib>Lyu, Yingmin</creatorcontrib><title>Hydrangea arborescens 'Annabelle' Flower Formation and Flowering in the Current Year</title><title>Plants (Basel)</title><addtitle>Plants (Basel)</addtitle><description>The perennial woody plant
'Annabelle' is of great research value due to its unique mechanism of flower development that occurs in the current year, resulting in decorative flowers that can be enjoyed for a relatively long period of time. However, the mechanisms underlying the regulation of current-year flower development in
'Annabelle' are still not fully understood. In this study, we conducted an associated analysis to explore the core regulating network in
.
'Annabelle' by combining phenological observations, physiological assays, and transcriptome comparisons across seven flower developmental stages. Through this analysis, we constructed a gene co-expression network (GCN) based on the highest reciprocal rank (HRR), using 509 differentially expressed genes (DEGs) identified from seven flowering-related pathways, as well as the biosynthesis of eight flowering-related phytohormones and signal transduction in the transcriptomic analysis. According to the analysis of the GCN, we identified 14 key genes with the highest functional connectivity that played critical roles in specific development stages. We confirmed that 135 transcription factors (AP2/ERF, bHLH, CO-like, GRAS, MIKC, SBP, WRKY) were highly co-expressed with the 14 key genes, indicating their close associations with the development of current-year flowers. We further proposed a hypothetical model of a gene regulatory network for the development of the whole flower. This model suggested that the photoperiod, aging, and gibberellin pathways, along with the phytohormones abscisic acid (ABA), gibberellin (GA), brassinosteroid (BR), and jasmonic acid (JA), work synergistically to promote the floral transition. Additionally, auxin, GA, JA, ABA, and salicylic acid (SA) regulated the blooming process by involving the circadian clock. Cytokinin (CTK), ethylene (ETH), and SA were key regulators that affected flower senescence. Additionally, several floral integrators (
,
,
,
,
,
, etc.) were dominant contributors to the development of
.
flowers. Overall, this research provides a comprehensive understanding of the dynamic mechanism underlying the entire process of current-year flower development, thereby offering valuable insights for further studies on the flower development of
'Annabelle'.</description><subject>Abscisic acid</subject><subject>Biosynthesis</subject><subject>Circadian rhythms</subject><subject>Cold</subject><subject>current-year flower development</subject><subject>Cytokinins</subject><subject>Developmental stages</subject><subject>Flowering</subject><subject>Flowers</subject><subject>Flowers & plants</subject><subject>gene co-expression network</subject><subject>Gene expression</subject><subject>Genes</subject><subject>Gibberellins</subject><subject>Hormones</subject><subject>Hydrangea arborescens</subject><subject>Jasmonic acid</subject><subject>Morphogenesis</subject><subject>Morphology</subject><subject>phytohormone</subject><subject>Phytohormones</subject><subject>Salicylic acid</subject><subject>Senescence</subject><subject>Signal transduction</subject><subject>Transcription factors</subject><subject>transcriptome (RNA-seq)</subject><subject>Transcriptomes</subject><subject>Transcriptomics</subject><subject>Woody plants</subject><issn>2223-7747</issn><issn>2223-7747</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkk1PGzEQhleoVUGUa4_IUg_0EurPtX2qUNQAElIvcOBkza5nw0YbO7V3qfj3dUiKSC1LY41fP7bfmar6wuilEJZ-3wwQxsw4l5JRcVSdcM7FTGupP7xbH1dnOa9oGaZMVn-qjoVhkkpBT6r7mxefICwRCKQmJswthkwurkKABocBL8hiiH8wkUVMaxj7GAgEv0_2YUn6QMYnJPMpJQwjeURIn6uPHQwZz_bxtHpY_Lyf38zufl3fzq_uZq2UdJzpGlD62jQahReWKVVb37TGWNFx2moqrKfoG2gaBVxiS7k0THEKqms7psRpdbvj-ggrt0n9GtKLi9C710RMSwdp7NsBnfWKirrRJZS7O2sk1thizZVn2ktbWD92rM3UrNEXF8YEwwH0cCf0T24Znx2jWppSgkL4tiek-HvCPLp1X9wcSpEwTtlxS5Xipq5pkX79T7qKUwrFq61KGmmM3qoud6o2xZwTdm-vYdRtG8AdNkA5cP7-D2_yf-UWfwFGs6vg</recordid><startdate>20231207</startdate><enddate>20231207</enddate><creator>Huang, Xiaoxu</creator><creator>Lyu, Tong</creator><creator>Li, Zheng</creator><creator>Lyu, Yingmin</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7X2</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7P</scope><scope>P64</scope><scope>PATMY</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20231207</creationdate><title>Hydrangea arborescens 'Annabelle' Flower Formation and Flowering in the Current Year</title><author>Huang, Xiaoxu ; 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'Annabelle' is of great research value due to its unique mechanism of flower development that occurs in the current year, resulting in decorative flowers that can be enjoyed for a relatively long period of time. However, the mechanisms underlying the regulation of current-year flower development in
'Annabelle' are still not fully understood. In this study, we conducted an associated analysis to explore the core regulating network in
.
'Annabelle' by combining phenological observations, physiological assays, and transcriptome comparisons across seven flower developmental stages. Through this analysis, we constructed a gene co-expression network (GCN) based on the highest reciprocal rank (HRR), using 509 differentially expressed genes (DEGs) identified from seven flowering-related pathways, as well as the biosynthesis of eight flowering-related phytohormones and signal transduction in the transcriptomic analysis. According to the analysis of the GCN, we identified 14 key genes with the highest functional connectivity that played critical roles in specific development stages. We confirmed that 135 transcription factors (AP2/ERF, bHLH, CO-like, GRAS, MIKC, SBP, WRKY) were highly co-expressed with the 14 key genes, indicating their close associations with the development of current-year flowers. We further proposed a hypothetical model of a gene regulatory network for the development of the whole flower. This model suggested that the photoperiod, aging, and gibberellin pathways, along with the phytohormones abscisic acid (ABA), gibberellin (GA), brassinosteroid (BR), and jasmonic acid (JA), work synergistically to promote the floral transition. Additionally, auxin, GA, JA, ABA, and salicylic acid (SA) regulated the blooming process by involving the circadian clock. Cytokinin (CTK), ethylene (ETH), and SA were key regulators that affected flower senescence. Additionally, several floral integrators (
,
,
,
,
,
, etc.) were dominant contributors to the development of
.
flowers. Overall, this research provides a comprehensive understanding of the dynamic mechanism underlying the entire process of current-year flower development, thereby offering valuable insights for further studies on the flower development of
'Annabelle'.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>38140430</pmid><doi>10.3390/plants12244103</doi><oa>free_for_read</oa></addata></record> |
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subjects | Abscisic acid Biosynthesis Circadian rhythms Cold current-year flower development Cytokinins Developmental stages Flowering Flowers Flowers & plants gene co-expression network Gene expression Genes Gibberellins Hormones Hydrangea arborescens Jasmonic acid Morphogenesis Morphology phytohormone Phytohormones Salicylic acid Senescence Signal transduction Transcription factors transcriptome (RNA-seq) Transcriptomes Transcriptomics Woody plants |
title | Hydrangea arborescens 'Annabelle' Flower Formation and Flowering in the Current Year |
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