A High-Throughput Screening System Based on Droplet Microfluidics for Glucose Oxidase Gene Libraries

• Published in: Molecules (Basel, Switzerland) Switzerland), 2020-05, Vol.25 (10), p.2418
• Main Authors: Prodanović, Radivoje, Ung, W Lloyd, Đurđić, Karla Ilić, Fischer, Rainer, Weitz, David A, Ostafe, Raluca
• Format: Article
• Language: English
• Subjects: Directed Molecular Evolution; Environmental monitoring; enzyme optimization; Enzymes; Flow Cytometry; Fluorescein; Fluorescence; fluorescent label; Gene libraries; Gene Library; Genetic screening; Glucose; Glucose oxidase; Glucose Oxidase - chemistry; Glucose Oxidase - genetics; Glucose Oxidase - isolation & purification; High-throughput screening; High-Throughput Screening Assays; Hydrogen peroxide; Lab-On-A-Chip Devices; Microfluidics; Mutagenesis; Mutagenesis - genetics; Mutant Proteins - genetics; Mutant Proteins - isolation & purification; Mutants; Mutation; Protein Conformation; Protein Engineering; Saccharomyces cerevisiae - enzymology; Saccharomyces cerevisiae - genetics; Saturation mutagenesis; sorting; Structure-Activity Relationship; Yeast; Yeasts
• ISSN: 1420-3049; 1420-3049
• DOI: 10.3390/molecules25102418

Glucose oxidase (GOx) is an important industrial enzyme that can be optimized for specific applications by mutagenesis and activity-based screening. To increase the efficiency of this approach, we have developed a new ultrahigh-throughput screening platform based on a microfluidic lab-on-chip device that allows the sorting of GOx mutants from a saturation mutagenesis library expressed on the surface of yeast cells. GOx activity was measured by monitoring the fluorescence of water microdroplets dispersed in perfluorinated oil. The signal was generated via a series of coupled enzyme reactions leading to the formation of fluorescein. Using this new method, we were able to enrich the yeast cell population by more than 35-fold for GOx mutants with higher than wild-type activity after two rounds of sorting, almost double the efficiency of our previously described flow cytometry platform. We identified and characterized novel GOx mutants, the most promising of which (M6) contained a combination of six point mutations that increased the catalytic constant k by 2.1-fold compared to wild-type GOx and by 1.4-fold compared to a parental GOx variant. The new microfluidic platform for GOx was therefore more sensitive than flow cytometry and supports comprehensive screens of gene libraries containing multiple mutations per gene.