Loading…
Haplotypes of the tRNAleu-COII mtDNA Region in Russian Apis mellifera Populations
Analysis of the mtDNA locus is a widely used tool to establish belonging to a particular evolutionary lineage of L. (lineages A, M, C, O, and Y). In Russia, most of the area was once inhabited by from the M evolutionary lineage, but the introduction of bee subspecies from the southern regions of Rus...
Saved in:
| Published in: | Animals (Basel) 2023-07, Vol.13 (14), p.2394 |
|---|---|
| Main Authors: | , , |
| Format: | Article |
| Language: | English |
| Subjects: | |
| Citations: | Items that this one cites Items that cite this one |
| Online Access: | Get full text |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| cited_by | cdi_FETCH-LOGICAL-c476t-1a3be6e1e64168f6b87bfbbca49c183243206d7270bf8591e87f8e24ba23208c3 |
|---|---|
| cites | cdi_FETCH-LOGICAL-c476t-1a3be6e1e64168f6b87bfbbca49c183243206d7270bf8591e87f8e24ba23208c3 |
| container_end_page | |
| container_issue | 14 |
| container_start_page | 2394 |
| container_title | Animals (Basel) |
| container_volume | 13 |
| creator | Kaskinova, Milyausha D Gaifullina, Luisa R Saltykova, Elena S |
| description | Analysis of the mtDNA
locus is a widely used tool to establish belonging to a particular evolutionary lineage of
L. (lineages A, M, C, O, and Y). In Russia, most of the area was once inhabited by
from the M evolutionary lineage, but the introduction of bee subspecies from the southern regions of Russia (
,
) and from abroad (
,
) led to fragmentation of their native range. In this study, the results of assessing the haplotype number for the
locus of mtDNA in Russian
populations were presented. We analyzed 269 colonies from 19 regions of Russia. As a result, two evolutionary lineages were identified: the East European lineage C (26.4%) and the Northwestern European lineage M (73.6%). A total of 29 haplotypes were identified, 8 of them were already reported, and 21 were found to be novel. From the C lineage, haplotypes C1, C2, C2c, C2j, and C3 were predominant. All M lineage samples from Russia belong to the M17 and M4' haplogroups but have only minor variations in the form of nucleotide substitutions. An analysis of publications devoted to the
locus haplotypes, as well as an analysis of the available
sequences in GenBank, showed that there is still a problem with the haplotype nomenclature. |
| doi_str_mv | 10.3390/ani13142394 |
| format | article |
| fullrecord | <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_a3fefb68b9e04bcdbcf098274b4b9d02</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_a3fefb68b9e04bcdbcf098274b4b9d02</doaj_id><sourcerecordid>2842909619</sourcerecordid><originalsourceid>FETCH-LOGICAL-c476t-1a3be6e1e64168f6b87bfbbca49c183243206d7270bf8591e87f8e24ba23208c3</originalsourceid><addsrcrecordid>eNpdkV1rFDEUhgdRbKm98l4GvBFkNF-TjytZtrZdKK0ueh2SzMk2y-xkTGaE_nuzbi1bc5OQ8_Cc5D1V9RajT5Qq9NkMAVPMCFXsRXVKkOAN4bh9eXQ-qc5z3qKyREtxi19XJ1S0SGKBT6vv12bs4_QwQq6jr6d7qKf17aKHuVnerVb1brq4XdRr2IQ41GGo13POwQz1Ygy53kHfBw_J1N_iOPdmKlB-U73yps9w_rifVT8vv_5YXjc3d1er5eKmcUzwqcGGWuCAgTPMpedWCuutdYYphyUljBLEO0EEsl62CoMUXgJh1pBSkY6eVauDt4tmq8cUdiY96GiC_nsR00abNAXXgzbUg7dcWgWIWddZ55GSRDDLrOoQKa4vB9c42x10DoYpmf6Z9HllCPd6E39rjKgoEcti-PBoSPHXDHnSu5BdyccMEOesiWSs9GyFKuj7_9BtnNNQstpTRCHF8Z76eKBcijkn8E-vwUjvR6-PRl_od8cfeGL_DZr-AZcbqGM</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2842909619</pqid></control><display><type>article</type><title>Haplotypes of the tRNAleu-COII mtDNA Region in Russian Apis mellifera Populations</title><source>Publicly Available Content Database</source><source>PubMed Central</source><creator>Kaskinova, Milyausha D ; Gaifullina, Luisa R ; Saltykova, Elena S</creator><creatorcontrib>Kaskinova, Milyausha D ; Gaifullina, Luisa R ; Saltykova, Elena S</creatorcontrib><description>Analysis of the mtDNA
locus is a widely used tool to establish belonging to a particular evolutionary lineage of
L. (lineages A, M, C, O, and Y). In Russia, most of the area was once inhabited by
from the M evolutionary lineage, but the introduction of bee subspecies from the southern regions of Russia (
,
) and from abroad (
,
) led to fragmentation of their native range. In this study, the results of assessing the haplotype number for the
locus of mtDNA in Russian
populations were presented. We analyzed 269 colonies from 19 regions of Russia. As a result, two evolutionary lineages were identified: the East European lineage C (26.4%) and the Northwestern European lineage M (73.6%). A total of 29 haplotypes were identified, 8 of them were already reported, and 21 were found to be novel. From the C lineage, haplotypes C1, C2, C2c, C2j, and C3 were predominant. All M lineage samples from Russia belong to the M17 and M4' haplogroups but have only minor variations in the form of nucleotide substitutions. An analysis of publications devoted to the
locus haplotypes, as well as an analysis of the available
sequences in GenBank, showed that there is still a problem with the haplotype nomenclature.</description><identifier>ISSN: 2076-2615</identifier><identifier>EISSN: 2076-2615</identifier><identifier>DOI: 10.3390/ani13142394</identifier><identifier>PMID: 37508171</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Beekeeping ; Bees ; C lineage haplotypes ; Genetic diversity ; Genomes ; Haplotypes ; Honey ; Hybridization ; M lineage haplotypes ; Maximum likelihood method ; Mitochondrial DNA ; Sharks ; Software ; tRNAleu-COII loci ; White people</subject><ispartof>Animals (Basel), 2023-07, Vol.13 (14), p.2394</ispartof><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2023 by the authors. 2023</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c476t-1a3be6e1e64168f6b87bfbbca49c183243206d7270bf8591e87f8e24ba23208c3</citedby><cites>FETCH-LOGICAL-c476t-1a3be6e1e64168f6b87bfbbca49c183243206d7270bf8591e87f8e24ba23208c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/2842909619/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/2842909619?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,25731,27901,27902,36989,36990,44566,53766,53768,74869</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/37508171$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kaskinova, Milyausha D</creatorcontrib><creatorcontrib>Gaifullina, Luisa R</creatorcontrib><creatorcontrib>Saltykova, Elena S</creatorcontrib><title>Haplotypes of the tRNAleu-COII mtDNA Region in Russian Apis mellifera Populations</title><title>Animals (Basel)</title><addtitle>Animals (Basel)</addtitle><description>Analysis of the mtDNA
locus is a widely used tool to establish belonging to a particular evolutionary lineage of
L. (lineages A, M, C, O, and Y). In Russia, most of the area was once inhabited by
from the M evolutionary lineage, but the introduction of bee subspecies from the southern regions of Russia (
,
) and from abroad (
,
) led to fragmentation of their native range. In this study, the results of assessing the haplotype number for the
locus of mtDNA in Russian
populations were presented. We analyzed 269 colonies from 19 regions of Russia. As a result, two evolutionary lineages were identified: the East European lineage C (26.4%) and the Northwestern European lineage M (73.6%). A total of 29 haplotypes were identified, 8 of them were already reported, and 21 were found to be novel. From the C lineage, haplotypes C1, C2, C2c, C2j, and C3 were predominant. All M lineage samples from Russia belong to the M17 and M4' haplogroups but have only minor variations in the form of nucleotide substitutions. An analysis of publications devoted to the
locus haplotypes, as well as an analysis of the available
sequences in GenBank, showed that there is still a problem with the haplotype nomenclature.</description><subject>Beekeeping</subject><subject>Bees</subject><subject>C lineage haplotypes</subject><subject>Genetic diversity</subject><subject>Genomes</subject><subject>Haplotypes</subject><subject>Honey</subject><subject>Hybridization</subject><subject>M lineage haplotypes</subject><subject>Maximum likelihood method</subject><subject>Mitochondrial DNA</subject><subject>Sharks</subject><subject>Software</subject><subject>tRNAleu-COII loci</subject><subject>White people</subject><issn>2076-2615</issn><issn>2076-2615</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkV1rFDEUhgdRbKm98l4GvBFkNF-TjytZtrZdKK0ueh2SzMk2y-xkTGaE_nuzbi1bc5OQ8_Cc5D1V9RajT5Qq9NkMAVPMCFXsRXVKkOAN4bh9eXQ-qc5z3qKyREtxi19XJ1S0SGKBT6vv12bs4_QwQq6jr6d7qKf17aKHuVnerVb1brq4XdRr2IQ41GGo13POwQz1Ygy53kHfBw_J1N_iOPdmKlB-U73yps9w_rifVT8vv_5YXjc3d1er5eKmcUzwqcGGWuCAgTPMpedWCuutdYYphyUljBLEO0EEsl62CoMUXgJh1pBSkY6eVauDt4tmq8cUdiY96GiC_nsR00abNAXXgzbUg7dcWgWIWddZ55GSRDDLrOoQKa4vB9c42x10DoYpmf6Z9HllCPd6E39rjKgoEcti-PBoSPHXDHnSu5BdyccMEOesiWSs9GyFKuj7_9BtnNNQstpTRCHF8Z76eKBcijkn8E-vwUjvR6-PRl_od8cfeGL_DZr-AZcbqGM</recordid><startdate>20230724</startdate><enddate>20230724</enddate><creator>Kaskinova, Milyausha D</creator><creator>Gaifullina, Luisa R</creator><creator>Saltykova, Elena S</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20230724</creationdate><title>Haplotypes of the tRNAleu-COII mtDNA Region in Russian Apis mellifera Populations</title><author>Kaskinova, Milyausha D ; Gaifullina, Luisa R ; Saltykova, Elena S</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c476t-1a3be6e1e64168f6b87bfbbca49c183243206d7270bf8591e87f8e24ba23208c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>Beekeeping</topic><topic>Bees</topic><topic>C lineage haplotypes</topic><topic>Genetic diversity</topic><topic>Genomes</topic><topic>Haplotypes</topic><topic>Honey</topic><topic>Hybridization</topic><topic>M lineage haplotypes</topic><topic>Maximum likelihood method</topic><topic>Mitochondrial DNA</topic><topic>Sharks</topic><topic>Software</topic><topic>tRNAleu-COII loci</topic><topic>White people</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kaskinova, Milyausha D</creatorcontrib><creatorcontrib>Gaifullina, Luisa R</creatorcontrib><creatorcontrib>Saltykova, Elena S</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Animals (Basel)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kaskinova, Milyausha D</au><au>Gaifullina, Luisa R</au><au>Saltykova, Elena S</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Haplotypes of the tRNAleu-COII mtDNA Region in Russian Apis mellifera Populations</atitle><jtitle>Animals (Basel)</jtitle><addtitle>Animals (Basel)</addtitle><date>2023-07-24</date><risdate>2023</risdate><volume>13</volume><issue>14</issue><spage>2394</spage><pages>2394-</pages><issn>2076-2615</issn><eissn>2076-2615</eissn><abstract>Analysis of the mtDNA
locus is a widely used tool to establish belonging to a particular evolutionary lineage of
L. (lineages A, M, C, O, and Y). In Russia, most of the area was once inhabited by
from the M evolutionary lineage, but the introduction of bee subspecies from the southern regions of Russia (
,
) and from abroad (
,
) led to fragmentation of their native range. In this study, the results of assessing the haplotype number for the
locus of mtDNA in Russian
populations were presented. We analyzed 269 colonies from 19 regions of Russia. As a result, two evolutionary lineages were identified: the East European lineage C (26.4%) and the Northwestern European lineage M (73.6%). A total of 29 haplotypes were identified, 8 of them were already reported, and 21 were found to be novel. From the C lineage, haplotypes C1, C2, C2c, C2j, and C3 were predominant. All M lineage samples from Russia belong to the M17 and M4' haplogroups but have only minor variations in the form of nucleotide substitutions. An analysis of publications devoted to the
locus haplotypes, as well as an analysis of the available
sequences in GenBank, showed that there is still a problem with the haplotype nomenclature.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>37508171</pmid><doi>10.3390/ani13142394</doi><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 2076-2615 |
| ispartof | Animals (Basel), 2023-07, Vol.13 (14), p.2394 |
| issn | 2076-2615 2076-2615 |
| language | eng |
| recordid | cdi_doaj_primary_oai_doaj_org_article_a3fefb68b9e04bcdbcf098274b4b9d02 |
| source | Publicly Available Content Database; PubMed Central |
| subjects | Beekeeping Bees C lineage haplotypes Genetic diversity Genomes Haplotypes Honey Hybridization M lineage haplotypes Maximum likelihood method Mitochondrial DNA Sharks Software tRNAleu-COII loci White people |
| title | Haplotypes of the tRNAleu-COII mtDNA Region in Russian Apis mellifera Populations |
| url | http://sfxeu10.hosted.exlibrisgroup.com/loughborough?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-30T22%3A36%3A35IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Haplotypes%20of%20the%20tRNAleu-COII%20mtDNA%20Region%20in%20Russian%20Apis%20mellifera%20Populations&rft.jtitle=Animals%20(Basel)&rft.au=Kaskinova,%20Milyausha%20D&rft.date=2023-07-24&rft.volume=13&rft.issue=14&rft.spage=2394&rft.pages=2394-&rft.issn=2076-2615&rft.eissn=2076-2615&rft_id=info:doi/10.3390/ani13142394&rft_dat=%3Cproquest_doaj_%3E2842909619%3C/proquest_doaj_%3E%3Cgrp_id%3Ecdi_FETCH-LOGICAL-c476t-1a3be6e1e64168f6b87bfbbca49c183243206d7270bf8591e87f8e24ba23208c3%3C/grp_id%3E%3Coa%3E%3C/oa%3E%3Curl%3E%3C/url%3E&rft_id=info:oai/&rft_pqid=2842909619&rft_id=info:pmid/37508171&rfr_iscdi=true |