Characteristic of Pseudomonas syringae pv. atrofaciens Isolated from Weeds of Wheat Field

• Published in: Applied sciences 2021-01, Vol.11 (1), p.286
• Main Authors: Butsenko, Liudmyla, Pasichnyk, Lidiia, Kolomiiets, Yuliia, Kalinichenko, Antonina, Suszanowicz, Dariusz, Sporek, Monika, Patyka, Volodymyr
• Format: Article
• Language: English
• Subjects: Aggressiveness; Agricultural practices; Bacteria; Bacterial infections; basal glume rot; Cereal crops; Cereals; Chromatography; Control methods; Crop diseases; Crop rotation; Crops; Drinking water; Fatty acids; Flowers & plants; Hydroxy acids; Immunization; Infections; Inoculation; Morphology; Pathogens; Physiology; Polymerase chain reaction; Pseudomonas; Pseudomonas syringae; Pseudomonas syringae pv. atrofaciens; Random amplified polymorphic DNA; RAPD; Rot; Serology; Strains (organisms); Virology; Weeds; Wheat
• ISSN: 2076-3417; 2076-3417
• DOI: 10.3390/app11010286

The aim of this study was the identification of the causative agent of the basal glume rot of wheat Pseudomonas syringae pv. atrofaciens from the affected weeds in wheat crops, and determination of its virulent properties. Isolation of P. syringae pv. atrofaciens from weeds of wheat crops was carried out by classical microbiological methods. To identify isolated bacteria, their morphological, cultural, biochemical, and serological properties as well as fatty acids and Random Amplification of Polymorphic DNA (RAPD)-PCR (Polymerase chain reaction) profiles with the OPA-13 primer were studied. Pathogenic properties were investigated by artificial inoculation of wheat plants and weed plants, from which bacteria were isolated. For the first time, bacteria that are virulent both for weeds and wheat were isolated from weeds growing in wheat crops. It was shown that the fatty acids profiles of the bacteria isolated from the weeds contained typical for P. syringae pv. atrofaciens fatty acids, in particular, hydroxy acids: 3-hydroxydecanoic, 2-hydroxydodecanoic, and 3-hydroxydodecanoic. RAPD-PCR profiles of the newly isolated strains were identical to those of the collection strains P. syringae pv. atrofaciens UCM B-1011 and P. syringae pv. atrofaciens UCM B-1014 and contained a dominant fragment of 700 bp. The isolated strains, according to their phenotypic and genotypic properties, were identified as P. syringae pv. atrofaciens. It was established that the causative agent of basal glume rot of wheat P. syringae pv. atrofaciens is polyphagous and capable of infecting a wide range of plants. The main control measure for cereals diseases caused by P. syringae pv. Atrofaciens—crop rotations with nonhost species, should be revised, and alternative control methods must be proposed.