Bacterial biomarkers capable of identifying recurrence or metastasis carry disease severity information for lung cancer

• Published in: Frontiers in microbiology 2022-09, Vol.13, p.1007831-1007831
• Main Authors: Yuan, Xuelian, Wang, Zhina, Li, Changjun, Lv, Kebo, Tian, Geng, Tang, Min, Ji, Lei, Yang, Jialiang
• Format: Article
• Language: English
• Subjects: bacterial community; lung cancer; Microbiology; random forest; recurrence or metastasis; survival
• ISSN: 1664-302X; 1664-302X
• DOI: 10.3389/fmicb.2022.1007831

BackgroundLocal recurrence and distant metastasis are the main causes of death in patients with lung cancer. Multiple studies have described the recurrence or metastasis of lung cancer at the genetic level. However, association between the microbiome of lung cancer tissue and recurrence or metastasis remains to be discovered. Here, we aimed to identify the bacterial biomarkers capable of distinguishing patients with lung cancer from recurrence or metastasis, and how it related to the severity of patients with lung cancer. MethodsWe applied microbiome pipeline to bacterial communities of 134 non-recurrence and non-metastasis (non-RM) and 174 recurrence or metastasis (RM) samples downloaded from The Cancer Genome Atlas (TCGA). Co-occurrence network was built to explore the bacterial interactions in lung cancer tissue of RM and non-RM. Finally, the Kaplan-Meier survival analysis was used to evaluate the association between bacterial biomarkers and patient survival. ResultsCompared with non-RM, the bacterial community of RM had lower richness and higher Bray-Curtis dissimilarity index. Interestingly, the co-occurrence network of non-RM was more complex than RM. The top 500 genera in relative abundance obtained an area under the curve (AUC) of 0.72 when discriminating between RM and non-RM. There were significant differences in the relative abundances of Acidovorax, Clostridioides, Succinimonas, and Shewanella, and so on between RM and non-RM. These biomarkers played a role in predicting the survival of lung cancer patients and were significantly associated with lung cancer stage. ConclusionThis study provides the first evidence for the prediction of lung cancer recurrence or metastasis by bacteria in lung cancer tissue. Our results highlights that bacterial biomarkers that distinguish RM and non-RM are also associated with patient survival and disease severity.