The complete chloroplast genome and phylogenetic analysis of Garcinia esculenta Y. H. Li. 1981 (Clusiaceae)

Y. H. Li. 1981 (Clusiaceae) is an endemic tree species in China, primarily found in western and northwestern Yunnan Province. In this research, the complete chloroplast genome of was sequenced using the Illumina NovaSeq6000 platform. The result showed that the length of the complete chloroplast geno...

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Bibliographic Details
Published in:Mitochondrial DNA. Part B. Resources 2024-10, Vol.9 (10), p.1374-1378
Main Authors: Shi, Fengzhi, Li, Siying, Fan, Min, Wang, Shuang
Format: Article
Language:English
Subjects:
Biodiversity
Chloroplasts
Clusiaceae
complete chloroplast genome
Data Note
Endemic species
Ethics
Garcinia
Garcinia esculenta
Genes
Genomes
Genomic analysis
Germplasm
Inverted repeat
Leaves
Mitochondrial DNA
Pharmacy
phylogenetic analysis
Phylogenetics
Phylogeny
Plastome Report
rRNA
Trees
tRNA
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Summary:Y. H. Li. 1981 (Clusiaceae) is an endemic tree species in China, primarily found in western and northwestern Yunnan Province. In this research, the complete chloroplast genome of was sequenced using the Illumina NovaSeq6000 platform. The result showed that the length of the complete chloroplast genome was 155,853 bp, which was composed of a large single-copy region (LSC) of 84,534 bp, a small single-copy region (SSC) of 17,175 bp, and a pair of inverted repeat (IR) regions of 27,072 bp. The overall GC content was 36.1%. The complete chloroplast genome encompassed 128 genes, comprising 83 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis of the complete chloroplast genome sequences of 22 species revealed that is most closely related to .
ISSN:2380-2359
2380-2359
DOI:10.1080/23802359.2024.2412244