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Calculating the Aqueous pKa of Phenols: Predictions for Antioxidants and Cannabinoids
We aim to develop a theoretical methodology for the accurate aqueous pKa prediction of structurally complex phenolic antioxidants and cannabinoids. In this study, five functionals (M06-2X, B3LYP, BHandHLYP, PBE0, and TPSS) and two solvent models (SMD and PCM) were combined with the 6-311++G(d,p) bas...
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Published in: | Antioxidants 2023-07, Vol.12 (7), p.1420 |
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description | We aim to develop a theoretical methodology for the accurate aqueous pKa prediction of structurally complex phenolic antioxidants and cannabinoids. In this study, five functionals (M06-2X, B3LYP, BHandHLYP, PBE0, and TPSS) and two solvent models (SMD and PCM) were combined with the 6-311++G(d,p) basis set to predict pKa values for twenty structurally simple phenols. None of the direct calculations produced good results. However, the correlations between the calculated Gibbs energy difference of each acid and its conjugate base, ΔGaq(BA)°=ΔGaqA−°−ΔGaq(HA)°, and the experimental aqueous pKa values had superior predictive accuracy, which was also tested relative to an independent set of ten molecules of which six were structurally complex phenols. New correlations were built with twenty-seven phenols (including the phenols with experimental pKa values from the test set), which were used to make predictions. The best correlation equations used the PCM method and produced mean absolute errors of 0.26–0.27 pKa units and R2 values of 0.957–0.960. The average range of predictions for the potential antioxidants (cannabinoids) was 0.15 (0.25) pKa units, which indicates good agreement between our methodologies. The new correlation equations could be used to make pKa predictions for other phenols in water and potentially in other solvents where they might be more soluble. |
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In this study, five functionals (M06-2X, B3LYP, BHandHLYP, PBE0, and TPSS) and two solvent models (SMD and PCM) were combined with the 6-311++G(d,p) basis set to predict pKa values for twenty structurally simple phenols. None of the direct calculations produced good results. However, the correlations between the calculated Gibbs energy difference of each acid and its conjugate base, ΔGaq(BA)°=ΔGaqA−°−ΔGaq(HA)°, and the experimental aqueous pKa values had superior predictive accuracy, which was also tested relative to an independent set of ten molecules of which six were structurally complex phenols. New correlations were built with twenty-seven phenols (including the phenols with experimental pKa values from the test set), which were used to make predictions. The best correlation equations used the PCM method and produced mean absolute errors of 0.26–0.27 pKa units and R2 values of 0.957–0.960. The average range of predictions for the potential antioxidants (cannabinoids) was 0.15 (0.25) pKa units, which indicates good agreement between our methodologies. The new correlation equations could be used to make pKa predictions for other phenols in water and potentially in other solvents where they might be more soluble.</description><identifier>ISSN: 2076-3921</identifier><identifier>EISSN: 2076-3921</identifier><identifier>DOI: 10.3390/antiox12071420</identifier><identifier>PMID: 37507958</identifier><language>eng</language><publisher>Basel: MDPI AG</publisher><subject>acid dissociation constant ; Acids ; Antioxidants ; Cannabinoids ; Equilibrium ; Phenolic compounds ; Phenols ; pKa ; Predictions ; Software ; Solvents</subject><ispartof>Antioxidants, 2023-07, Vol.12 (7), p.1420</ispartof><rights>2023 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). 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The average range of predictions for the potential antioxidants (cannabinoids) was 0.15 (0.25) pKa units, which indicates good agreement between our methodologies. The new correlation equations could be used to make pKa predictions for other phenols in water and potentially in other solvents where they might be more soluble.</description><subject>acid dissociation constant</subject><subject>Acids</subject><subject>Antioxidants</subject><subject>Cannabinoids</subject><subject>Equilibrium</subject><subject>Phenolic compounds</subject><subject>Phenols</subject><subject>pKa</subject><subject>Predictions</subject><subject>Software</subject><subject>Solvents</subject><issn>2076-3921</issn><issn>2076-3921</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2023</creationdate><recordtype>article</recordtype><sourceid>PIMPY</sourceid><sourceid>DOA</sourceid><recordid>eNpdkk1vEzEQhi0EolXptWdLXLikeGzv2uaCoqhARSV6aM-WvzZxtLGDvYvov8dpKkTwxaPxq2dmXg9CV0CuGVPko0lTzL-BEgGcklfovEX9gikKr_-Jz9BlrVvSjgImiXqLzpjoiFCdPEePKzO6eTRTTGs8bQJe_pxDnivefzc4D_h-E1Ie6yd8X4KPrtVLFQ-54OVz7ehbDxWb5PHKpGRsTDn6-g69GcxYw-XLfYEev9w8rL4t7n58vV0t7xaOg5gWsu-I6wmBjlHSeyMCcwDCeOkd7Zy1nivJO-XAM2d75S2DANAGM0EyCewC3R65Pput3pe4M-VJZxP1cyKXtTZlim4M2hJBVdfwoAZOgpLUcmGZZdxLIULfWJ-PrP1sd8G7kKZixhPo6UuKG73OvzQQJnrgpBE-vBBKbi7WSe9idWEcTTpYqqnkvP1BB6JJ3_8n3ea5pObVQUUVUYIdxrs-qlzJtZYw_O0GiD5sgD7dAPYHP9KiFg</recordid><startdate>20230713</startdate><enddate>20230713</enddate><creator>Walton-Raaby, Max</creator><creator>Floen, Tyler</creator><creator>García-Díez, Guillermo</creator><creator>Mora-Diez, Nelaine</creator><general>MDPI AG</general><general>MDPI</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7QR</scope><scope>7T5</scope><scope>7TO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M7P</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope><orcidid>https://orcid.org/0000-0002-1648-2222</orcidid><orcidid>https://orcid.org/0009-0008-7252-9348</orcidid></search><sort><creationdate>20230713</creationdate><title>Calculating the Aqueous pKa of Phenols: Predictions for Antioxidants and Cannabinoids</title><author>Walton-Raaby, Max ; Floen, Tyler ; García-Díez, Guillermo ; Mora-Diez, Nelaine</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c417t-8650c600153206da7e3c117ad8dc25cbbd498459c1d3cb69db31e11076ae83813</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2023</creationdate><topic>acid dissociation constant</topic><topic>Acids</topic><topic>Antioxidants</topic><topic>Cannabinoids</topic><topic>Equilibrium</topic><topic>Phenolic compounds</topic><topic>Phenols</topic><topic>pKa</topic><topic>Predictions</topic><topic>Software</topic><topic>Solvents</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Walton-Raaby, Max</creatorcontrib><creatorcontrib>Floen, Tyler</creatorcontrib><creatorcontrib>García-Díez, Guillermo</creatorcontrib><creatorcontrib>Mora-Diez, Nelaine</creatorcontrib><collection>CrossRef</collection><collection>Chemoreception Abstracts</collection><collection>Immunology Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Antioxidants</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Walton-Raaby, Max</au><au>Floen, Tyler</au><au>García-Díez, Guillermo</au><au>Mora-Diez, Nelaine</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Calculating the Aqueous pKa of Phenols: Predictions for Antioxidants and Cannabinoids</atitle><jtitle>Antioxidants</jtitle><date>2023-07-13</date><risdate>2023</risdate><volume>12</volume><issue>7</issue><spage>1420</spage><pages>1420-</pages><issn>2076-3921</issn><eissn>2076-3921</eissn><abstract>We aim to develop a theoretical methodology for the accurate aqueous pKa prediction of structurally complex phenolic antioxidants and cannabinoids. 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The average range of predictions for the potential antioxidants (cannabinoids) was 0.15 (0.25) pKa units, which indicates good agreement between our methodologies. The new correlation equations could be used to make pKa predictions for other phenols in water and potentially in other solvents where they might be more soluble.</abstract><cop>Basel</cop><pub>MDPI AG</pub><pmid>37507958</pmid><doi>10.3390/antiox12071420</doi><orcidid>https://orcid.org/0000-0002-1648-2222</orcidid><orcidid>https://orcid.org/0009-0008-7252-9348</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | acid dissociation constant Acids Antioxidants Cannabinoids Equilibrium Phenolic compounds Phenols pKa Predictions Software Solvents |
title | Calculating the Aqueous pKa of Phenols: Predictions for Antioxidants and Cannabinoids |
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