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Signals of adaptation to agricultural stress in the genomes of two European bumblebees
Human-induced environmental impacts on wildlife are widespread, causing major biodiversity losses. One major threat is agricultural intensification, typically characterised by large areas of monoculture, mechanical tillage, and the use of agrochemicals. Intensification leads to the fragmentation and...
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Published in: | Frontiers in genetics 2022-10, Vol.13, p.993416-993416 |
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creator | Hart, Alex F. Verbeeck, Jaro Ariza, Daniel Cejas, Diego Ghisbain, Guillaume Honchar, Hanna Radchenko, Vladimir G. Straka, Jakub Ljubomirov, Toshko Lecocq, Thomas Dániel-Ferreira, Juliana Flaminio, Simone Bortolotti, Laura Karise, Reet Meeus, Ivan Smagghe, Guy Vereecken, Nicolas Vandamme, Peter Michez, Denis Maebe, Kevin |
description | Human-induced environmental impacts on wildlife are widespread, causing major biodiversity losses. One major threat is agricultural intensification, typically characterised by large areas of monoculture, mechanical tillage, and the use of agrochemicals. Intensification leads to the fragmentation and loss of natural habitats, native vegetation, and nesting and breeding sites. Understanding the adaptability of insects to these changing environmental conditions is critical to predicting their survival. Bumblebees, key pollinators of wild and cultivated plants, are used as model species to assess insect adaptation to anthropogenic stressors. We investigated the effects of agricultural pressures on two common European bumblebees,
Bombus pascuorum
and
B. lapidarius
. Restriction-site Associated DNA Sequencing was used to identify loci under selective pressure across agricultural-natural gradients over 97 locations in Europe. 191 unique loci in
B. pascuorum
and 260 in
B. lapidarius
were identified as under selective pressure, and associated with agricultural stressors. Further investigation suggested several candidate proteins including several neurodevelopment, muscle, and detoxification proteins, but these have yet to be validated. These results provide insights into agriculture as a stressor for bumblebees, and signal for conservation action in light of ongoing anthropogenic changes. |
doi_str_mv | 10.3389/fgene.2022.993416 |
format | article |
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Bombus pascuorum
and
B. lapidarius
. Restriction-site Associated DNA Sequencing was used to identify loci under selective pressure across agricultural-natural gradients over 97 locations in Europe. 191 unique loci in
B. pascuorum
and 260 in
B. lapidarius
were identified as under selective pressure, and associated with agricultural stressors. Further investigation suggested several candidate proteins including several neurodevelopment, muscle, and detoxification proteins, but these have yet to be validated. These results provide insights into agriculture as a stressor for bumblebees, and signal for conservation action in light of ongoing anthropogenic changes.</description><identifier>ISSN: 1664-8021</identifier><identifier>EISSN: 1664-8021</identifier><identifier>DOI: 10.3389/fgene.2022.993416</identifier><language>eng</language><publisher>Frontiers Media S.A</publisher><subject>agricultural intensification ; Animal and Dairy Science ; bee decline ; Bombus ; Climate Research ; Genetics ; global change ; Husdjursvetenskap ; Klimatforskning ; population genomics ; RADseq ; Zoologi ; Zoology</subject><ispartof>Frontiers in genetics, 2022-10, Vol.13, p.993416-993416</ispartof><rights>Copyright © 2022 Hart, Verbeeck, Ariza, Cejas, Ghisbain, Honchar, Radchenko, Straka, Ljubomirov, Lecocq, Dániel-Ferreira, Flaminio, Bortolotti, Karise, Meeus, Smagghe, Vereecken, Vandamme, Michez and Maebe. 2022 Hart, Verbeeck, Ariza, Cejas, Ghisbain, Honchar, Radchenko, Straka, Ljubomirov, Lecocq, Dániel-Ferreira, Flaminio, Bortolotti, Karise, Meeus, Smagghe, Vereecken, Vandamme, Michez and Maebe</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c481t-72d9b447fe30e088c9c568517bdf99cbcfee37ca3445effe0ba7b1388a33f4c3</citedby><cites>FETCH-LOGICAL-c481t-72d9b447fe30e088c9c568517bdf99cbcfee37ca3445effe0ba7b1388a33f4c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579324/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC9579324/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,881,27903,27904,53770,53772</link.rule.ids><backlink>$$Uhttps://res.slu.se/id/publ/119749$$DView record from Swedish Publication Index$$Hfree_for_read</backlink></links><search><creatorcontrib>Hart, Alex F.</creatorcontrib><creatorcontrib>Verbeeck, Jaro</creatorcontrib><creatorcontrib>Ariza, Daniel</creatorcontrib><creatorcontrib>Cejas, Diego</creatorcontrib><creatorcontrib>Ghisbain, Guillaume</creatorcontrib><creatorcontrib>Honchar, Hanna</creatorcontrib><creatorcontrib>Radchenko, Vladimir G.</creatorcontrib><creatorcontrib>Straka, Jakub</creatorcontrib><creatorcontrib>Ljubomirov, Toshko</creatorcontrib><creatorcontrib>Lecocq, Thomas</creatorcontrib><creatorcontrib>Dániel-Ferreira, Juliana</creatorcontrib><creatorcontrib>Flaminio, Simone</creatorcontrib><creatorcontrib>Bortolotti, Laura</creatorcontrib><creatorcontrib>Karise, Reet</creatorcontrib><creatorcontrib>Meeus, Ivan</creatorcontrib><creatorcontrib>Smagghe, Guy</creatorcontrib><creatorcontrib>Vereecken, Nicolas</creatorcontrib><creatorcontrib>Vandamme, Peter</creatorcontrib><creatorcontrib>Michez, Denis</creatorcontrib><creatorcontrib>Maebe, Kevin</creatorcontrib><creatorcontrib>Sveriges lantbruksuniversitet</creatorcontrib><title>Signals of adaptation to agricultural stress in the genomes of two European bumblebees</title><title>Frontiers in genetics</title><description>Human-induced environmental impacts on wildlife are widespread, causing major biodiversity losses. One major threat is agricultural intensification, typically characterised by large areas of monoculture, mechanical tillage, and the use of agrochemicals. Intensification leads to the fragmentation and loss of natural habitats, native vegetation, and nesting and breeding sites. Understanding the adaptability of insects to these changing environmental conditions is critical to predicting their survival. Bumblebees, key pollinators of wild and cultivated plants, are used as model species to assess insect adaptation to anthropogenic stressors. We investigated the effects of agricultural pressures on two common European bumblebees,
Bombus pascuorum
and
B. lapidarius
. Restriction-site Associated DNA Sequencing was used to identify loci under selective pressure across agricultural-natural gradients over 97 locations in Europe. 191 unique loci in
B. pascuorum
and 260 in
B. lapidarius
were identified as under selective pressure, and associated with agricultural stressors. Further investigation suggested several candidate proteins including several neurodevelopment, muscle, and detoxification proteins, but these have yet to be validated. These results provide insights into agriculture as a stressor for bumblebees, and signal for conservation action in light of ongoing anthropogenic changes.</description><subject>agricultural intensification</subject><subject>Animal and Dairy Science</subject><subject>bee decline</subject><subject>Bombus</subject><subject>Climate Research</subject><subject>Genetics</subject><subject>global change</subject><subject>Husdjursvetenskap</subject><subject>Klimatforskning</subject><subject>population genomics</subject><subject>RADseq</subject><subject>Zoologi</subject><subject>Zoology</subject><issn>1664-8021</issn><issn>1664-8021</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2022</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVkk9r3DAQxU1ooWGbD9Cbjrns1vqzlnQphJC2gUAPDb2KkTxyFGxrK8kJ_fbVrkPp6jJC895vxPCa5hNtd5wr_dkPOOOOtYzttOaCdhfNJe06sVUto-_-u39ornJ-busRmnMuLptfP8Mww5hJ9AR6OBQoIc6kRAJDCm4Zy5JgJLkkzJmE2nlCUsfFCU-e8hrJ3ZLiAWEmdpnsiBYxf2ze-0rFq7e6aR6_3j3eft8-_Ph2f3vzsHVC0bKVrNdWCOmRt9gq5bTbd2pPpe291s46j8ilAy7EHr3H1oK0lCsFnHvh-Ka5X7F9hGdzSGGC9MdECOb0ENNgIJXgRjSWC8a08hIlFeAlUA8A1omOgaW-razdysqveFjsGS2Pi4V0LCajoVTLur9N82U1VPWEvcO51FWd-c47c3gyQ3wxei81Z6ICrt8AKf5eMBczhexwHGHGuGTDJFO0_ro7SukqdSnmnND_G0Nbc8yAOWXAHDNg1gzwv701qXo</recordid><startdate>20221005</startdate><enddate>20221005</enddate><creator>Hart, Alex F.</creator><creator>Verbeeck, Jaro</creator><creator>Ariza, Daniel</creator><creator>Cejas, Diego</creator><creator>Ghisbain, Guillaume</creator><creator>Honchar, Hanna</creator><creator>Radchenko, Vladimir G.</creator><creator>Straka, Jakub</creator><creator>Ljubomirov, Toshko</creator><creator>Lecocq, Thomas</creator><creator>Dániel-Ferreira, Juliana</creator><creator>Flaminio, Simone</creator><creator>Bortolotti, Laura</creator><creator>Karise, Reet</creator><creator>Meeus, Ivan</creator><creator>Smagghe, Guy</creator><creator>Vereecken, Nicolas</creator><creator>Vandamme, Peter</creator><creator>Michez, Denis</creator><creator>Maebe, Kevin</creator><general>Frontiers Media S.A</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>ADTPV</scope><scope>AOWAS</scope><scope>D8T</scope><scope>ZZAVC</scope><scope>DOA</scope></search><sort><creationdate>20221005</creationdate><title>Signals of adaptation to agricultural stress in the genomes of two European bumblebees</title><author>Hart, Alex F. ; Verbeeck, Jaro ; Ariza, Daniel ; Cejas, Diego ; Ghisbain, Guillaume ; Honchar, Hanna ; Radchenko, Vladimir G. ; Straka, Jakub ; Ljubomirov, Toshko ; Lecocq, Thomas ; Dániel-Ferreira, Juliana ; Flaminio, Simone ; Bortolotti, Laura ; Karise, Reet ; Meeus, Ivan ; Smagghe, Guy ; Vereecken, Nicolas ; Vandamme, Peter ; Michez, Denis ; Maebe, Kevin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c481t-72d9b447fe30e088c9c568517bdf99cbcfee37ca3445effe0ba7b1388a33f4c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2022</creationdate><topic>agricultural intensification</topic><topic>Animal and Dairy Science</topic><topic>bee decline</topic><topic>Bombus</topic><topic>Climate Research</topic><topic>Genetics</topic><topic>global change</topic><topic>Husdjursvetenskap</topic><topic>Klimatforskning</topic><topic>population genomics</topic><topic>RADseq</topic><topic>Zoologi</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hart, Alex F.</creatorcontrib><creatorcontrib>Verbeeck, Jaro</creatorcontrib><creatorcontrib>Ariza, Daniel</creatorcontrib><creatorcontrib>Cejas, Diego</creatorcontrib><creatorcontrib>Ghisbain, Guillaume</creatorcontrib><creatorcontrib>Honchar, Hanna</creatorcontrib><creatorcontrib>Radchenko, Vladimir G.</creatorcontrib><creatorcontrib>Straka, Jakub</creatorcontrib><creatorcontrib>Ljubomirov, Toshko</creatorcontrib><creatorcontrib>Lecocq, Thomas</creatorcontrib><creatorcontrib>Dániel-Ferreira, Juliana</creatorcontrib><creatorcontrib>Flaminio, Simone</creatorcontrib><creatorcontrib>Bortolotti, Laura</creatorcontrib><creatorcontrib>Karise, Reet</creatorcontrib><creatorcontrib>Meeus, Ivan</creatorcontrib><creatorcontrib>Smagghe, Guy</creatorcontrib><creatorcontrib>Vereecken, Nicolas</creatorcontrib><creatorcontrib>Vandamme, Peter</creatorcontrib><creatorcontrib>Michez, Denis</creatorcontrib><creatorcontrib>Maebe, Kevin</creatorcontrib><creatorcontrib>Sveriges lantbruksuniversitet</creatorcontrib><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>SwePub</collection><collection>SwePub Articles</collection><collection>SWEPUB Freely available online</collection><collection>SwePub Articles full text</collection><collection>Directory of Open Access Journals</collection><jtitle>Frontiers in genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hart, Alex F.</au><au>Verbeeck, Jaro</au><au>Ariza, Daniel</au><au>Cejas, Diego</au><au>Ghisbain, Guillaume</au><au>Honchar, Hanna</au><au>Radchenko, Vladimir G.</au><au>Straka, Jakub</au><au>Ljubomirov, Toshko</au><au>Lecocq, Thomas</au><au>Dániel-Ferreira, Juliana</au><au>Flaminio, Simone</au><au>Bortolotti, Laura</au><au>Karise, Reet</au><au>Meeus, Ivan</au><au>Smagghe, Guy</au><au>Vereecken, Nicolas</au><au>Vandamme, Peter</au><au>Michez, Denis</au><au>Maebe, Kevin</au><aucorp>Sveriges lantbruksuniversitet</aucorp><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Signals of adaptation to agricultural stress in the genomes of two European bumblebees</atitle><jtitle>Frontiers in genetics</jtitle><date>2022-10-05</date><risdate>2022</risdate><volume>13</volume><spage>993416</spage><epage>993416</epage><pages>993416-993416</pages><issn>1664-8021</issn><eissn>1664-8021</eissn><abstract>Human-induced environmental impacts on wildlife are widespread, causing major biodiversity losses. One major threat is agricultural intensification, typically characterised by large areas of monoculture, mechanical tillage, and the use of agrochemicals. Intensification leads to the fragmentation and loss of natural habitats, native vegetation, and nesting and breeding sites. Understanding the adaptability of insects to these changing environmental conditions is critical to predicting their survival. Bumblebees, key pollinators of wild and cultivated plants, are used as model species to assess insect adaptation to anthropogenic stressors. We investigated the effects of agricultural pressures on two common European bumblebees,
Bombus pascuorum
and
B. lapidarius
. Restriction-site Associated DNA Sequencing was used to identify loci under selective pressure across agricultural-natural gradients over 97 locations in Europe. 191 unique loci in
B. pascuorum
and 260 in
B. lapidarius
were identified as under selective pressure, and associated with agricultural stressors. Further investigation suggested several candidate proteins including several neurodevelopment, muscle, and detoxification proteins, but these have yet to be validated. These results provide insights into agriculture as a stressor for bumblebees, and signal for conservation action in light of ongoing anthropogenic changes.</abstract><pub>Frontiers Media S.A</pub><doi>10.3389/fgene.2022.993416</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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source | PubMed Central |
subjects | agricultural intensification Animal and Dairy Science bee decline Bombus Climate Research Genetics global change Husdjursvetenskap Klimatforskning population genomics RADseq Zoologi Zoology |
title | Signals of adaptation to agricultural stress in the genomes of two European bumblebees |
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