EndoNuke: Nuclei Detection Dataset for Estrogen and Progesterone Stained IHC Endometrium Scans

We present EndoNuke, an open dataset consisting of tiles from endometrium immunohistochemistry slides with the nuclei annotated as keypoints. Several experts with various experience have annotated the dataset. Apart from gathering the data and creating the annotation, we have performed an agreement...

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Published in:Data (Basel) 2022-06, Vol.7 (6), p.75
Main Authors: Naumov, Anton, Ushakov, Egor, Ivanov, Andrey, Midiber, Konstantin, Khovanskaya, Tatyana, Konyukova, Alexandra, Vishnyakova, Polina, Nora, Sergei, Mikhaleva, Liudmila, Fatkhudinov, Timur, Karpulevich, Evgeny
Format: Article
Language:English
Subjects:
Annotations
Automation
Biopsy
Cysts
Datasets
digital pathology
Endometrium
Estrogen
Estrogens
Immunohistochemistry
Infertility
Labeling
Medical informatics
Medical research
Metastasis
Methods
Nuclei
nuclei detection dataset
Ovarian cancer
Progesterone
Prostate
whole-slide imaging
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container_issue 6
container_start_page 75
container_title Data (Basel)
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creator Naumov, Anton
Ushakov, Egor
Ivanov, Andrey
Midiber, Konstantin
Khovanskaya, Tatyana
Konyukova, Alexandra
Vishnyakova, Polina
Nora, Sergei
Mikhaleva, Liudmila
Fatkhudinov, Timur
Karpulevich, Evgeny
description We present EndoNuke, an open dataset consisting of tiles from endometrium immunohistochemistry slides with the nuclei annotated as keypoints. Several experts with various experience have annotated the dataset. Apart from gathering the data and creating the annotation, we have performed an agreement study and analyzed the distribution of nuclei staining intensity.
doi_str_mv 10.3390/data7060075
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ispartof Data (Basel), 2022-06, Vol.7 (6), p.75
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subjects Annotations
Automation
Biopsy
Cysts
Datasets
digital pathology
Endometrium
Estrogen
Estrogens
Immunohistochemistry
Infertility
Labeling
Medical informatics
Medical research
Metastasis
Methods
Nuclei
nuclei detection dataset
Ovarian cancer
Progesterone
Prostate
whole-slide imaging
title EndoNuke: Nuclei Detection Dataset for Estrogen and Progesterone Stained IHC Endometrium Scans
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