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Angular Phenozaxine Ethers as Potent Multi-microbial Targets Inhibitors: Design, Synthesis, and Molecular Docking Studies
The reaction of diaza-5H-benzo[a]phenoxazin-5-one and 5H-benzo[a]phenoxazin-5-one with various phenols catalyzed by Pd/t-BuXPhos/K PO system gave previously unknown ether derivatives ( and ) in good yields. UV-visible, FTIR, and H NMR data were used to confirm structures of the synthesized compounds...
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Published in: | Frontiers in chemistry 2017-11, Vol.5, p.107-107 |
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creator | Ezeokonkwo, Mercy A Ogbonna, Onyinyechi N Okafor, Sunday N Godwin-Nwakwasi, Evelyn U Ibeanu, Fidelia N Okoro, Uchechukwu C |
description | The reaction of diaza-5H-benzo[a]phenoxazin-5-one and 5H-benzo[a]phenoxazin-5-one with various phenols catalyzed by Pd/t-BuXPhos/K
PO
system gave previously unknown ether derivatives (
and
) in good yields. UV-visible, FTIR, and
H NMR data were used to confirm structures of the synthesized compounds. The parent compounds and the derivatives were screened
for their drug-likeness and binding affinities to the microbial targets through molecular docking. Molinspiration software and AutoDock were used for the drug-likeness and docking studies, respectively. All the synthesized compounds showed strong drug-likeness. They also showed excellent binding affinities with glucosamine-6-phosphate synthase (2VF5), AmpC beta-lactamase (1KE4), and Lanosterol-14α-demethylase (3JUV), with compound 7e having the highest binding energies -9.5, -9.3, and -9.3 kcal/mol, respectively. These were found to be higher than the binding energies of the standard drugs. The binding energies of ciprofloxacin with 2VF5 and 1KE4 were -7.8 and -7.5 kcal/mol, respectively, while that of ketoconazole with 3JUV was -8.6 kcal/mol. The study showed that the synthesized compounds have multi-target inhibitory effects and can be very useful in multi-drug resistance cases. A 2D quantitative structural activity relationship (QSAR) model against target Glucosamine-6-phosphate synthase (2VF5) was developed using partial least squares regression (PLS) with good internal prediction (
= 0.7400) and external prediction (
_ predicted = 0.5475) via Molecular Operating Environment (2014). |
doi_str_mv | 10.3389/fchem.2017.00107 |
format | article |
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PO
system gave previously unknown ether derivatives (
and
) in good yields. UV-visible, FTIR, and
H NMR data were used to confirm structures of the synthesized compounds. The parent compounds and the derivatives were screened
for their drug-likeness and binding affinities to the microbial targets through molecular docking. Molinspiration software and AutoDock were used for the drug-likeness and docking studies, respectively. All the synthesized compounds showed strong drug-likeness. They also showed excellent binding affinities with glucosamine-6-phosphate synthase (2VF5), AmpC beta-lactamase (1KE4), and Lanosterol-14α-demethylase (3JUV), with compound 7e having the highest binding energies -9.5, -9.3, and -9.3 kcal/mol, respectively. These were found to be higher than the binding energies of the standard drugs. The binding energies of ciprofloxacin with 2VF5 and 1KE4 were -7.8 and -7.5 kcal/mol, respectively, while that of ketoconazole with 3JUV was -8.6 kcal/mol. The study showed that the synthesized compounds have multi-target inhibitory effects and can be very useful in multi-drug resistance cases. A 2D quantitative structural activity relationship (QSAR) model against target Glucosamine-6-phosphate synthase (2VF5) was developed using partial least squares regression (PLS) with good internal prediction (
= 0.7400) and external prediction (
_ predicted = 0.5475) via Molecular Operating Environment (2014).</description><identifier>ISSN: 2296-2646</identifier><identifier>EISSN: 2296-2646</identifier><identifier>DOI: 10.3389/fchem.2017.00107</identifier><identifier>PMID: 29238706</identifier><language>eng</language><publisher>Switzerland: Frontiers Media S.A</publisher><subject>benzo[a]phenoxazin-5-one ; Chemistry ; diazabenzo[a]phenoxazin-5-one ; ether ; molecular docking ; multi-drug target ; phenols</subject><ispartof>Frontiers in chemistry, 2017-11, Vol.5, p.107-107</ispartof><rights>Copyright © 2017 Ezeokonkwo, Ogbonna, Okafor, Godwin-Nwakwasi, Ibeanu and Okoro. 2017 Ezeokonkwo, Ogbonna, Okafor, Godwin-Nwakwasi, Ibeanu and Okoro</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c462t-bad0e50ae0e2340ff11f0413ab25fb7ecab1e51e7c55313e16e16533e6c3b26c3</citedby><cites>FETCH-LOGICAL-c462t-bad0e50ae0e2340ff11f0413ab25fb7ecab1e51e7c55313e16e16533e6c3b26c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5712349/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC5712349/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29238706$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ezeokonkwo, Mercy A</creatorcontrib><creatorcontrib>Ogbonna, Onyinyechi N</creatorcontrib><creatorcontrib>Okafor, Sunday N</creatorcontrib><creatorcontrib>Godwin-Nwakwasi, Evelyn U</creatorcontrib><creatorcontrib>Ibeanu, Fidelia N</creatorcontrib><creatorcontrib>Okoro, Uchechukwu C</creatorcontrib><title>Angular Phenozaxine Ethers as Potent Multi-microbial Targets Inhibitors: Design, Synthesis, and Molecular Docking Studies</title><title>Frontiers in chemistry</title><addtitle>Front Chem</addtitle><description>The reaction of diaza-5H-benzo[a]phenoxazin-5-one and 5H-benzo[a]phenoxazin-5-one with various phenols catalyzed by Pd/t-BuXPhos/K
PO
system gave previously unknown ether derivatives (
and
) in good yields. UV-visible, FTIR, and
H NMR data were used to confirm structures of the synthesized compounds. The parent compounds and the derivatives were screened
for their drug-likeness and binding affinities to the microbial targets through molecular docking. Molinspiration software and AutoDock were used for the drug-likeness and docking studies, respectively. All the synthesized compounds showed strong drug-likeness. They also showed excellent binding affinities with glucosamine-6-phosphate synthase (2VF5), AmpC beta-lactamase (1KE4), and Lanosterol-14α-demethylase (3JUV), with compound 7e having the highest binding energies -9.5, -9.3, and -9.3 kcal/mol, respectively. These were found to be higher than the binding energies of the standard drugs. The binding energies of ciprofloxacin with 2VF5 and 1KE4 were -7.8 and -7.5 kcal/mol, respectively, while that of ketoconazole with 3JUV was -8.6 kcal/mol. The study showed that the synthesized compounds have multi-target inhibitory effects and can be very useful in multi-drug resistance cases. A 2D quantitative structural activity relationship (QSAR) model against target Glucosamine-6-phosphate synthase (2VF5) was developed using partial least squares regression (PLS) with good internal prediction (
= 0.7400) and external prediction (
_ predicted = 0.5475) via Molecular Operating Environment (2014).</description><subject>benzo[a]phenoxazin-5-one</subject><subject>Chemistry</subject><subject>diazabenzo[a]phenoxazin-5-one</subject><subject>ether</subject><subject>molecular docking</subject><subject>multi-drug target</subject><subject>phenols</subject><issn>2296-2646</issn><issn>2296-2646</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2017</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNpVUktv1DAQjhCIVqV3TshHDs3iR2LHHJCqtsBKrajUcrYcZ5y4JHaxnYrl15PdLVUrWfbI_h6j8VcU7wleMdbIT9YMMK0oJmKFMcHiVXFIqeQl5RV__aw-KI5TusMLhhJWUfy2OKCSskZgflhsTn0_jzqi6wF8-Kv_OA_oIg8QE9IJXYcMPqOrecyunJyJoXV6RLc69pATWvvBtS6HmD6jc0iu9yfoZuMXenLpBGnfoaswgtk5nAfzy_ke3eS5c5DeFW-sHhMcP55Hxc-vF7dn38vLH9_WZ6eXpak4zWWrOww11oCBsgpbS4jFFWG6pbVtBRjdEqgJCFPXjDAgfFk1Y8ANa-myHRXrvW4X9J26j27ScaOCdmp3EWKvdMzOjKBaaTpqJRey0RWlpME15dIK0lSs4VYuWl_2WvdzO0FnltlEPb4Qffni3aD68KBqQZbutwIfHwVi-D1DympyycA4ag9hTopIsXXDUixQvIcuQ08pgn2yIVhtA6B2AVDbAKhdABbKh-ftPRH-fzf7B5wDrl0</recordid><startdate>20171128</startdate><enddate>20171128</enddate><creator>Ezeokonkwo, Mercy A</creator><creator>Ogbonna, Onyinyechi N</creator><creator>Okafor, Sunday N</creator><creator>Godwin-Nwakwasi, Evelyn U</creator><creator>Ibeanu, Fidelia N</creator><creator>Okoro, Uchechukwu C</creator><general>Frontiers Media S.A</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20171128</creationdate><title>Angular Phenozaxine Ethers as Potent Multi-microbial Targets Inhibitors: Design, Synthesis, and Molecular Docking Studies</title><author>Ezeokonkwo, Mercy A ; Ogbonna, Onyinyechi N ; Okafor, Sunday N ; Godwin-Nwakwasi, Evelyn U ; Ibeanu, Fidelia N ; Okoro, Uchechukwu C</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c462t-bad0e50ae0e2340ff11f0413ab25fb7ecab1e51e7c55313e16e16533e6c3b26c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2017</creationdate><topic>benzo[a]phenoxazin-5-one</topic><topic>Chemistry</topic><topic>diazabenzo[a]phenoxazin-5-one</topic><topic>ether</topic><topic>molecular docking</topic><topic>multi-drug target</topic><topic>phenols</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ezeokonkwo, Mercy A</creatorcontrib><creatorcontrib>Ogbonna, Onyinyechi N</creatorcontrib><creatorcontrib>Okafor, Sunday N</creatorcontrib><creatorcontrib>Godwin-Nwakwasi, Evelyn U</creatorcontrib><creatorcontrib>Ibeanu, Fidelia N</creatorcontrib><creatorcontrib>Okoro, Uchechukwu C</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Frontiers in chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ezeokonkwo, Mercy A</au><au>Ogbonna, Onyinyechi N</au><au>Okafor, Sunday N</au><au>Godwin-Nwakwasi, Evelyn U</au><au>Ibeanu, Fidelia N</au><au>Okoro, Uchechukwu C</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Angular Phenozaxine Ethers as Potent Multi-microbial Targets Inhibitors: Design, Synthesis, and Molecular Docking Studies</atitle><jtitle>Frontiers in chemistry</jtitle><addtitle>Front Chem</addtitle><date>2017-11-28</date><risdate>2017</risdate><volume>5</volume><spage>107</spage><epage>107</epage><pages>107-107</pages><issn>2296-2646</issn><eissn>2296-2646</eissn><abstract>The reaction of diaza-5H-benzo[a]phenoxazin-5-one and 5H-benzo[a]phenoxazin-5-one with various phenols catalyzed by Pd/t-BuXPhos/K
PO
system gave previously unknown ether derivatives (
and
) in good yields. UV-visible, FTIR, and
H NMR data were used to confirm structures of the synthesized compounds. The parent compounds and the derivatives were screened
for their drug-likeness and binding affinities to the microbial targets through molecular docking. Molinspiration software and AutoDock were used for the drug-likeness and docking studies, respectively. All the synthesized compounds showed strong drug-likeness. They also showed excellent binding affinities with glucosamine-6-phosphate synthase (2VF5), AmpC beta-lactamase (1KE4), and Lanosterol-14α-demethylase (3JUV), with compound 7e having the highest binding energies -9.5, -9.3, and -9.3 kcal/mol, respectively. These were found to be higher than the binding energies of the standard drugs. The binding energies of ciprofloxacin with 2VF5 and 1KE4 were -7.8 and -7.5 kcal/mol, respectively, while that of ketoconazole with 3JUV was -8.6 kcal/mol. The study showed that the synthesized compounds have multi-target inhibitory effects and can be very useful in multi-drug resistance cases. A 2D quantitative structural activity relationship (QSAR) model against target Glucosamine-6-phosphate synthase (2VF5) was developed using partial least squares regression (PLS) with good internal prediction (
= 0.7400) and external prediction (
_ predicted = 0.5475) via Molecular Operating Environment (2014).</abstract><cop>Switzerland</cop><pub>Frontiers Media S.A</pub><pmid>29238706</pmid><doi>10.3389/fchem.2017.00107</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
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subjects | benzo[a]phenoxazin-5-one Chemistry diazabenzo[a]phenoxazin-5-one ether molecular docking multi-drug target phenols |
title | Angular Phenozaxine Ethers as Potent Multi-microbial Targets Inhibitors: Design, Synthesis, and Molecular Docking Studies |
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