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Bioimage informatics approach to automated meibomian gland analysis in infrared images of meibography
Abstract Background Infrared (IR) meibography is an imaging technique to capture the Meibomian glands in the eyelids. These ocular surface structures are responsible for producing the lipid layer of the tear film which helps to reduce tear evaporation. In a normal healthy eye, the glands have simila...
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Published in: | Journal of optometry 2013-10, Vol.6 (4), p.194-204 |
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description | Abstract Background Infrared (IR) meibography is an imaging technique to capture the Meibomian glands in the eyelids. These ocular surface structures are responsible for producing the lipid layer of the tear film which helps to reduce tear evaporation. In a normal healthy eye, the glands have similar morphological features in terms of spatial width, in-plane elongation, length. On the other hand, eyes with Meibomian gland dysfunction show visible structural irregularities that help in the diagnosis and prognosis of the disease. However, currently there is no universally accepted algorithm for detection of these image features which will be clinically useful. We aim to develop a method of automated gland segmentation which allows images to be classified. Methods A set of 131 meibography images were acquired from patients from the Singapore National Eye Center. We used a method of automated gland segmentation using Gabor wavelets. Features of the imaged glands including orientation, width, length and curvature were extracted and the IR images enhanced. The images were classified as ‘healthy’, ‘intermediate’ or ‘unhealthy’, through the use of a support vector machine classifier (SVM). Half the images were used for training the SVM and the other half for validation. Independently of this procedure, the meibographs were classified by an expert clinician into the same 3 grades. Results The algorithm correctly detected 94% and 98% of mid-line pixels of gland and inter-gland regions, respectively, on healthy images. On intermediate images, correct detection rates of 92% and 97% of mid-line pixels of gland and inter-gland regions were achieved respectively. The true positive rate of detecting healthy images was 86%, and for intermediate images, 74%. The corresponding false positive rates were 15% and 31% respectively. Using the SVM, the proposed method has 88% accuracy in classifying images into the 3 classes. The classification of images into healthy and unhealthy classes achieved a 100% accuracy, but 7/38 intermediate images were incorrectly classified. Conclusions This technique of image analysis in meibography can help clinicians to interpret the degree of gland destruction in patients with dry eye and meibomian gland dysfunction. |
doi_str_mv | 10.1016/j.optom.2013.09.001 |
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fullrecord | <record><control><sourceid>elsevier_doaj_</sourceid><recordid>TN_cdi_doaj_primary_oai_doaj_org_article_bc14f58520604801b5d91131f481f91f</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1888429613000629</els_id><doaj_id>oai_doaj_org_article_bc14f58520604801b5d91131f481f91f</doaj_id><sourcerecordid>S1888429613000629</sourcerecordid><originalsourceid>FETCH-LOGICAL-c394t-48b71d05dd62263fcb7c1f3feb4b42df7c7d194d8ee5e4d5dc28015e05de42183</originalsourceid><addsrcrecordid>eNqFks-O1SAUhxujiePVJ3DTF2jlAG1h4SQ68c8kk7hQ14TCoZdrWxroneS-vXRqJhk3s4IA38eB3ymK90BqINB-ONVhWcNUUwKsJrImBF4UVyCFrIBx-jLPhRAVp7J9XbxJ6URIS6GTVwV-9sFPesDSzy7ESa_epFIvSwzaHMs1lPqczXpFW07o-zB5PZfDqGdb6lmPl-RTRjc66pgPPchSGdx-fIh6OV7eFq-cHhO--zceit9fv_y6-V7d_fh2e_PprjJM8rXiou_AksbaltKWOdN3Bhxz2POeU-s601mQ3ArEBrltrKGCQIOZQE5BsENxu3tt0Ce1xFxMvKigvXpYCHFQOuYXjqh6A9w1oqGkJTxb-sZKAAaOC3Ay33oornfXcu4ntAbnNerxifTpzuyPagj3iglBeMOygO0CE0NKEd0jC0Rtsalc0Rab2mJTRKocW6Y-7hTmf7r3GFUyHmeD1kc0a36If4a__o83o5-90eMfvGA6hXPMsSUFKlFF1M-tMba-AEa2ppDsL1TFugs</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype></control><display><type>article</type><title>Bioimage informatics approach to automated meibomian gland analysis in infrared images of meibography</title><source>PubMed</source><creator>Celik, Turgay ; Lee, Hwee Kuan ; Petznick, Andrea ; Tong, Louis</creator><creatorcontrib>Celik, Turgay ; Lee, Hwee Kuan ; Petznick, Andrea ; Tong, Louis</creatorcontrib><description>Abstract Background Infrared (IR) meibography is an imaging technique to capture the Meibomian glands in the eyelids. These ocular surface structures are responsible for producing the lipid layer of the tear film which helps to reduce tear evaporation. In a normal healthy eye, the glands have similar morphological features in terms of spatial width, in-plane elongation, length. On the other hand, eyes with Meibomian gland dysfunction show visible structural irregularities that help in the diagnosis and prognosis of the disease. However, currently there is no universally accepted algorithm for detection of these image features which will be clinically useful. We aim to develop a method of automated gland segmentation which allows images to be classified. Methods A set of 131 meibography images were acquired from patients from the Singapore National Eye Center. We used a method of automated gland segmentation using Gabor wavelets. Features of the imaged glands including orientation, width, length and curvature were extracted and the IR images enhanced. The images were classified as ‘healthy’, ‘intermediate’ or ‘unhealthy’, through the use of a support vector machine classifier (SVM). Half the images were used for training the SVM and the other half for validation. Independently of this procedure, the meibographs were classified by an expert clinician into the same 3 grades. Results The algorithm correctly detected 94% and 98% of mid-line pixels of gland and inter-gland regions, respectively, on healthy images. On intermediate images, correct detection rates of 92% and 97% of mid-line pixels of gland and inter-gland regions were achieved respectively. The true positive rate of detecting healthy images was 86%, and for intermediate images, 74%. The corresponding false positive rates were 15% and 31% respectively. Using the SVM, the proposed method has 88% accuracy in classifying images into the 3 classes. The classification of images into healthy and unhealthy classes achieved a 100% accuracy, but 7/38 intermediate images were incorrectly classified. Conclusions This technique of image analysis in meibography can help clinicians to interpret the degree of gland destruction in patients with dry eye and meibomian gland dysfunction.</description><identifier>ISSN: 1888-4296</identifier><identifier>EISSN: 1989-1342</identifier><identifier>DOI: 10.1016/j.optom.2013.09.001</identifier><language>eng</language><publisher>Elsevier Espana</publisher><subject>Computer vision ; Diagnosis ; Dry eye syndrome ; Edge detection ; Exudación ; Gabor filtering ; Hemorragia retiniana ; Hipertensión ; Image processing ; Machine learning ; Macroaneurisma de la arteria retiniana ; Meibography ; Meibomian gland segmentation ; Ophthalmology ; Original ; Pérdida súbita de visión ; Ridge detection ; Valley detection</subject><ispartof>Journal of optometry, 2013-10, Vol.6 (4), p.194-204</ispartof><rights>Spanish General Council of Optometry</rights><rights>2013 Spanish General Council of Optometry</rights><rights>2013 Published by Elsevier España, S.L. on behalf of Spanish General Council of Optometry. 2013 Spanish General Council of Optometry</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c394t-48b71d05dd62263fcb7c1f3feb4b42df7c7d194d8ee5e4d5dc28015e05de42183</citedby><cites>FETCH-LOGICAL-c394t-48b71d05dd62263fcb7c1f3feb4b42df7c7d194d8ee5e4d5dc28015e05de42183</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3880453/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC3880453/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,314,723,776,780,881,27901,27902,53766,53768</link.rule.ids></links><search><creatorcontrib>Celik, Turgay</creatorcontrib><creatorcontrib>Lee, Hwee Kuan</creatorcontrib><creatorcontrib>Petznick, Andrea</creatorcontrib><creatorcontrib>Tong, Louis</creatorcontrib><title>Bioimage informatics approach to automated meibomian gland analysis in infrared images of meibography</title><title>Journal of optometry</title><description>Abstract Background Infrared (IR) meibography is an imaging technique to capture the Meibomian glands in the eyelids. These ocular surface structures are responsible for producing the lipid layer of the tear film which helps to reduce tear evaporation. In a normal healthy eye, the glands have similar morphological features in terms of spatial width, in-plane elongation, length. On the other hand, eyes with Meibomian gland dysfunction show visible structural irregularities that help in the diagnosis and prognosis of the disease. However, currently there is no universally accepted algorithm for detection of these image features which will be clinically useful. We aim to develop a method of automated gland segmentation which allows images to be classified. Methods A set of 131 meibography images were acquired from patients from the Singapore National Eye Center. We used a method of automated gland segmentation using Gabor wavelets. Features of the imaged glands including orientation, width, length and curvature were extracted and the IR images enhanced. The images were classified as ‘healthy’, ‘intermediate’ or ‘unhealthy’, through the use of a support vector machine classifier (SVM). Half the images were used for training the SVM and the other half for validation. Independently of this procedure, the meibographs were classified by an expert clinician into the same 3 grades. Results The algorithm correctly detected 94% and 98% of mid-line pixels of gland and inter-gland regions, respectively, on healthy images. On intermediate images, correct detection rates of 92% and 97% of mid-line pixels of gland and inter-gland regions were achieved respectively. The true positive rate of detecting healthy images was 86%, and for intermediate images, 74%. The corresponding false positive rates were 15% and 31% respectively. Using the SVM, the proposed method has 88% accuracy in classifying images into the 3 classes. The classification of images into healthy and unhealthy classes achieved a 100% accuracy, but 7/38 intermediate images were incorrectly classified. Conclusions This technique of image analysis in meibography can help clinicians to interpret the degree of gland destruction in patients with dry eye and meibomian gland dysfunction.</description><subject>Computer vision</subject><subject>Diagnosis</subject><subject>Dry eye syndrome</subject><subject>Edge detection</subject><subject>Exudación</subject><subject>Gabor filtering</subject><subject>Hemorragia retiniana</subject><subject>Hipertensión</subject><subject>Image processing</subject><subject>Machine learning</subject><subject>Macroaneurisma de la arteria retiniana</subject><subject>Meibography</subject><subject>Meibomian gland segmentation</subject><subject>Ophthalmology</subject><subject>Original</subject><subject>Pérdida súbita de visión</subject><subject>Ridge detection</subject><subject>Valley detection</subject><issn>1888-4296</issn><issn>1989-1342</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>DOA</sourceid><recordid>eNqFks-O1SAUhxujiePVJ3DTF2jlAG1h4SQ68c8kk7hQ14TCoZdrWxroneS-vXRqJhk3s4IA38eB3ymK90BqINB-ONVhWcNUUwKsJrImBF4UVyCFrIBx-jLPhRAVp7J9XbxJ6URIS6GTVwV-9sFPesDSzy7ESa_epFIvSwzaHMs1lPqczXpFW07o-zB5PZfDqGdb6lmPl-RTRjc66pgPPchSGdx-fIh6OV7eFq-cHhO--zceit9fv_y6-V7d_fh2e_PprjJM8rXiou_AksbaltKWOdN3Bhxz2POeU-s601mQ3ArEBrltrKGCQIOZQE5BsENxu3tt0Ce1xFxMvKigvXpYCHFQOuYXjqh6A9w1oqGkJTxb-sZKAAaOC3Ay33oornfXcu4ntAbnNerxifTpzuyPagj3iglBeMOygO0CE0NKEd0jC0Rtsalc0Rab2mJTRKocW6Y-7hTmf7r3GFUyHmeD1kc0a36If4a__o83o5-90eMfvGA6hXPMsSUFKlFF1M-tMba-AEa2ppDsL1TFugs</recordid><startdate>201310</startdate><enddate>201310</enddate><creator>Celik, Turgay</creator><creator>Lee, Hwee Kuan</creator><creator>Petznick, Andrea</creator><creator>Tong, Louis</creator><general>Elsevier Espana</general><general>Elsevier</general><scope>6I.</scope><scope>AAFTH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>201310</creationdate><title>Bioimage informatics approach to automated meibomian gland analysis in infrared images of meibography</title><author>Celik, Turgay ; Lee, Hwee Kuan ; Petznick, Andrea ; Tong, Louis</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c394t-48b71d05dd62263fcb7c1f3feb4b42df7c7d194d8ee5e4d5dc28015e05de42183</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Computer vision</topic><topic>Diagnosis</topic><topic>Dry eye syndrome</topic><topic>Edge detection</topic><topic>Exudación</topic><topic>Gabor filtering</topic><topic>Hemorragia retiniana</topic><topic>Hipertensión</topic><topic>Image processing</topic><topic>Machine learning</topic><topic>Macroaneurisma de la arteria retiniana</topic><topic>Meibography</topic><topic>Meibomian gland segmentation</topic><topic>Ophthalmology</topic><topic>Original</topic><topic>Pérdida súbita de visión</topic><topic>Ridge detection</topic><topic>Valley detection</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Celik, Turgay</creatorcontrib><creatorcontrib>Lee, Hwee Kuan</creatorcontrib><creatorcontrib>Petznick, Andrea</creatorcontrib><creatorcontrib>Tong, Louis</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>CrossRef</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Journal of optometry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Celik, Turgay</au><au>Lee, Hwee Kuan</au><au>Petznick, Andrea</au><au>Tong, Louis</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Bioimage informatics approach to automated meibomian gland analysis in infrared images of meibography</atitle><jtitle>Journal of optometry</jtitle><date>2013-10</date><risdate>2013</risdate><volume>6</volume><issue>4</issue><spage>194</spage><epage>204</epage><pages>194-204</pages><issn>1888-4296</issn><eissn>1989-1342</eissn><abstract>Abstract Background Infrared (IR) meibography is an imaging technique to capture the Meibomian glands in the eyelids. These ocular surface structures are responsible for producing the lipid layer of the tear film which helps to reduce tear evaporation. In a normal healthy eye, the glands have similar morphological features in terms of spatial width, in-plane elongation, length. On the other hand, eyes with Meibomian gland dysfunction show visible structural irregularities that help in the diagnosis and prognosis of the disease. However, currently there is no universally accepted algorithm for detection of these image features which will be clinically useful. We aim to develop a method of automated gland segmentation which allows images to be classified. Methods A set of 131 meibography images were acquired from patients from the Singapore National Eye Center. We used a method of automated gland segmentation using Gabor wavelets. Features of the imaged glands including orientation, width, length and curvature were extracted and the IR images enhanced. The images were classified as ‘healthy’, ‘intermediate’ or ‘unhealthy’, through the use of a support vector machine classifier (SVM). Half the images were used for training the SVM and the other half for validation. Independently of this procedure, the meibographs were classified by an expert clinician into the same 3 grades. Results The algorithm correctly detected 94% and 98% of mid-line pixels of gland and inter-gland regions, respectively, on healthy images. On intermediate images, correct detection rates of 92% and 97% of mid-line pixels of gland and inter-gland regions were achieved respectively. The true positive rate of detecting healthy images was 86%, and for intermediate images, 74%. The corresponding false positive rates were 15% and 31% respectively. Using the SVM, the proposed method has 88% accuracy in classifying images into the 3 classes. The classification of images into healthy and unhealthy classes achieved a 100% accuracy, but 7/38 intermediate images were incorrectly classified. Conclusions This technique of image analysis in meibography can help clinicians to interpret the degree of gland destruction in patients with dry eye and meibomian gland dysfunction.</abstract><pub>Elsevier Espana</pub><doi>10.1016/j.optom.2013.09.001</doi><tpages>11</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Computer vision Diagnosis Dry eye syndrome Edge detection Exudación Gabor filtering Hemorragia retiniana Hipertensión Image processing Machine learning Macroaneurisma de la arteria retiniana Meibography Meibomian gland segmentation Ophthalmology Original Pérdida súbita de visión Ridge detection Valley detection |
title | Bioimage informatics approach to automated meibomian gland analysis in infrared images of meibography |
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