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Chromatin state changes during neural development revealed by in vivo cell-type specific profiling
A key question in developmental biology is how cellular differentiation is controlled during development. While transitions between trithorax-group (TrxG) and polycomb-group (PcG) chromatin states are vital for the differentiation of ES cells to multipotent stem cells, little is known regarding the...
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Published in: | Nature communications 2017-12, Vol.8 (1), p.2271-2271, Article 2271 |
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description | A key question in developmental biology is how cellular differentiation is controlled during development. While transitions between trithorax-group (TrxG) and polycomb-group (PcG) chromatin states are vital for the differentiation of ES cells to multipotent stem cells, little is known regarding the role of chromatin states during development of the brain. Here we show that large-scale chromatin remodelling occurs during
Drosophila
neural development. We demonstrate that the majority of genes activated during neuronal differentiation are silent in neural stem cells (NSCs) and occupy black chromatin and a TrxG-repressive state. In neurons, almost all key NSC genes are switched off via HP1-mediated repression. PcG-mediated repression does not play a significant role in regulating these genes, but instead regulates lineage-specific transcription factors that control spatial and temporal patterning in the brain. Combined, our data suggest that forms of chromatin other than canonical PcG/TrxG transitions take over key roles during neural development.
While transitions between active and repressive chromatin states are essential for differentiation, little is known regarding their role during development of the brain in
Drosophila
. Here, the authors investigate the large scale chromatin remodelling taking place during fly neural development. |
doi_str_mv | 10.1038/s41467-017-02385-4 |
format | article |
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Drosophila
neural development. We demonstrate that the majority of genes activated during neuronal differentiation are silent in neural stem cells (NSCs) and occupy black chromatin and a TrxG-repressive state. In neurons, almost all key NSC genes are switched off via HP1-mediated repression. PcG-mediated repression does not play a significant role in regulating these genes, but instead regulates lineage-specific transcription factors that control spatial and temporal patterning in the brain. Combined, our data suggest that forms of chromatin other than canonical PcG/TrxG transitions take over key roles during neural development.
While transitions between active and repressive chromatin states are essential for differentiation, little is known regarding their role during development of the brain in
Drosophila
. Here, the authors investigate the large scale chromatin remodelling taking place during fly neural development.</description><identifier>ISSN: 2041-1723</identifier><identifier>EISSN: 2041-1723</identifier><identifier>DOI: 10.1038/s41467-017-02385-4</identifier><identifier>PMID: 29273756</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>13/100 ; 38 ; 38/23 ; 38/39 ; 631/208/176 ; 631/337/100 ; 631/532 ; 631/532/2182 ; 64/24 ; Animals ; Brain ; Cell Differentiation - genetics ; Chromatin - metabolism ; Chromatin Assembly and Disassembly - genetics ; Chromatin remodeling ; Developmental biology ; Differentiation (biology) ; Drosophila ; Fruit flies ; Gene Expression Regulation, Developmental ; Genes ; Humanities and Social Sciences ; multidisciplinary ; Neural stem cells ; Neural Stem Cells - metabolism ; Neurogenesis - genetics ; Neurons - metabolism ; Pattern formation ; Polycomb group proteins ; Science ; Science (multidisciplinary) ; Stem cells ; Transcription factors</subject><ispartof>Nature communications, 2017-12, Vol.8 (1), p.2271-2271, Article 2271</ispartof><rights>The Author(s) 2017</rights><rights>2017. This work is published under http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c606t-dd1c629b896eb5ed58c4025fa6dad430342a2f7de393268133c6fbab33b4475a3</citedby><cites>FETCH-LOGICAL-c606t-dd1c629b896eb5ed58c4025fa6dad430342a2f7de393268133c6fbab33b4475a3</cites><orcidid>0000-0003-1605-3871 ; 0000-0002-2089-6954</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.proquest.com/docview/1983423151/fulltextPDF?pq-origsite=primo$$EPDF$$P50$$Gproquest$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.proquest.com/docview/1983423151?pq-origsite=primo$$EHTML$$P50$$Gproquest$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,885,25753,27924,27925,37012,37013,44590,53791,53793,75126</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29273756$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Marshall, Owen J.</creatorcontrib><creatorcontrib>Brand, Andrea H.</creatorcontrib><title>Chromatin state changes during neural development revealed by in vivo cell-type specific profiling</title><title>Nature communications</title><addtitle>Nat Commun</addtitle><addtitle>Nat Commun</addtitle><description>A key question in developmental biology is how cellular differentiation is controlled during development. While transitions between trithorax-group (TrxG) and polycomb-group (PcG) chromatin states are vital for the differentiation of ES cells to multipotent stem cells, little is known regarding the role of chromatin states during development of the brain. Here we show that large-scale chromatin remodelling occurs during
Drosophila
neural development. We demonstrate that the majority of genes activated during neuronal differentiation are silent in neural stem cells (NSCs) and occupy black chromatin and a TrxG-repressive state. In neurons, almost all key NSC genes are switched off via HP1-mediated repression. PcG-mediated repression does not play a significant role in regulating these genes, but instead regulates lineage-specific transcription factors that control spatial and temporal patterning in the brain. Combined, our data suggest that forms of chromatin other than canonical PcG/TrxG transitions take over key roles during neural development.
While transitions between active and repressive chromatin states are essential for differentiation, little is known regarding their role during development of the brain in
Drosophila
. 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Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Nature communications</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Marshall, Owen J.</au><au>Brand, Andrea H.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Chromatin state changes during neural development revealed by in vivo cell-type specific profiling</atitle><jtitle>Nature communications</jtitle><stitle>Nat Commun</stitle><addtitle>Nat Commun</addtitle><date>2017-12-22</date><risdate>2017</risdate><volume>8</volume><issue>1</issue><spage>2271</spage><epage>2271</epage><pages>2271-2271</pages><artnum>2271</artnum><issn>2041-1723</issn><eissn>2041-1723</eissn><abstract>A key question in developmental biology is how cellular differentiation is controlled during development. While transitions between trithorax-group (TrxG) and polycomb-group (PcG) chromatin states are vital for the differentiation of ES cells to multipotent stem cells, little is known regarding the role of chromatin states during development of the brain. Here we show that large-scale chromatin remodelling occurs during
Drosophila
neural development. We demonstrate that the majority of genes activated during neuronal differentiation are silent in neural stem cells (NSCs) and occupy black chromatin and a TrxG-repressive state. In neurons, almost all key NSC genes are switched off via HP1-mediated repression. PcG-mediated repression does not play a significant role in regulating these genes, but instead regulates lineage-specific transcription factors that control spatial and temporal patterning in the brain. Combined, our data suggest that forms of chromatin other than canonical PcG/TrxG transitions take over key roles during neural development.
While transitions between active and repressive chromatin states are essential for differentiation, little is known regarding their role during development of the brain in
Drosophila
. Here, the authors investigate the large scale chromatin remodelling taking place during fly neural development.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>29273756</pmid><doi>10.1038/s41467-017-02385-4</doi><tpages>1</tpages><orcidid>https://orcid.org/0000-0003-1605-3871</orcidid><orcidid>https://orcid.org/0000-0002-2089-6954</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | 13/100 38 38/23 38/39 631/208/176 631/337/100 631/532 631/532/2182 64/24 Animals Brain Cell Differentiation - genetics Chromatin - metabolism Chromatin Assembly and Disassembly - genetics Chromatin remodeling Developmental biology Differentiation (biology) Drosophila Fruit flies Gene Expression Regulation, Developmental Genes Humanities and Social Sciences multidisciplinary Neural stem cells Neural Stem Cells - metabolism Neurogenesis - genetics Neurons - metabolism Pattern formation Polycomb group proteins Science Science (multidisciplinary) Stem cells Transcription factors |
title | Chromatin state changes during neural development revealed by in vivo cell-type specific profiling |
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