New Quinolinone O-GlcNAc Transferase Inhibitors Based on Fragment Growth

• Published in: Frontiers in chemistry 2021-04, Vol.9, p.666122-666122
• Main Authors: Weiss, Matjaž, Loi, Elena M, Sterle, Maša, Balsollier, Cyril, Tomašič, Tihomir, Pieters, Roland J, Gobec, Martina, Anderluh, Marko
• Format: Article
• Language: English
• Subjects: Chemistry; fragments growth; molecular docking; O-GlcNAc; O-GlcNAc transferase; protein glycosylation
• ISSN: 2296-2646; 2296-2646
• DOI: 10.3389/fchem.2021.666122

O-GlcNAcylation is an important post-translational and metabolic process in cells that must be carefully regulated. O-GlcNAc transferase (OGT) is ubiquitously present in cells and is the only enzyme that catalyzes the transfer of O-GlcNAc to proteins. OGT is a promising target in various pathologies such as cancer, immune system diseases, or nervous impairment. In our previous work we identified the 2-oxo-1,2-dihydroquinoline-4-carboxamide derivatives as promising compounds by a fragment-based drug design approach. Herein, we report the extension of this first series with several new fragments. As the most potent fragment, we identified with an IC value of 116.0 μM. If compared with the most potent inhibitor of the first series, (IC = 117.6 μM), we can conclude that the new fragments did not improve OGT inhibition remarkably. Therefore, was used as the basis for the design of a series of compounds with the elongation toward the O-GlcNAc binding pocket as the free carboxylate allows easy conjugation. Compound with an IC value of 144.5 μM showed the most potent OGT inhibition among the elongated compounds, but it loses inhibition potency when compared to the UDP mimetic . We therefore assume that the binding of the compounds in the O-GlcNAc binding pocket is likely not crucial for OGT inhibition. Furthermore, evaluation of the compounds with two different assays revealed that some inhibitors most likely interfere with the commercially available UDP-Glo™ glycosyltransferase assay, leading to false positive results. This observation calls for caution, when evaluating UDP mimetic as OGT inhibitors with the UDP-Glo™ glycosyltransferase assay, as misinterpretations can occur.