Surveying soil-borne disease development on wild rocket salad crop by proximal sensing based on high-resolution hyperspectral features

• Published in: Scientific reports 2022-03, Vol.12 (1), p.5098-5098, Article 5098
• Main Authors: Galieni, Angelica, Nicastro, Nicola, Pentangelo, Alfonso, Platani, Cristiano, Cardi, Teodoro, Pane, Catello
• Format: Article
• Language: English
• Subjects: 631/449; 639/624; Agricultural research; Brassicaceae - chemistry; Canopies; Chlorophyll; Crop diseases; Crops; Datasets; Decay; Disease management; Economics; Experiments; Functional foods & nutraceuticals; Fungicides; Humanities and Social Sciences; Laboratories; Leaves; Machine learning; multidisciplinary; Pathogens; Pesticides; Pigments; Plant diseases; Plant Leaves - chemistry; Research centers; Salads; Science; Science (multidisciplinary); Sensors; Soil; Soil surveys; Soil-borne diseases; Spectroscopy; Spectrum analysis; Sustainable use; Turgor; Vegetables; Vegetation; Water content
• ISSN: 2045-2322; 2045-2322
• DOI: 10.1038/s41598-022-08969-5

Wild rocket ( Diplotaxis tenuifolia , Brassicaceae) is a baby-leaf vegetable crop of high economic interest, used in ready-to-eat minimally processed salads, with an appreciated taste and nutraceutical features. Disease management is key to achieving the sustainability of the entire production chain in intensive systems, where synthetic fungicides are limited or not permitted. In this context, soil-borne pathologies, much feared by growers, are becoming a real emergency. Digital screening of green beds can be implemented in order to optimize the use of sustainable means. The current study used a high-resolution hyperspectral array (spectroscopy at 350–2500 nm) to attempt to follow the progression of symptoms of Rhizoctonia, Sclerotinia, and Sclerotium disease across four different severity levels. A Random Forest machine learning model reduced dimensions of the training big dataset allowing to compute de novo vegetation indices specifically informative about canopy decay caused by all basal pathogenic attacks. Their transferability was also tested on the canopy dataset, which was useful for assessing the health status of wild rocket plants. Indeed, the progression of symptoms associated with soil-borne pathogens is closely related to the reduction of leaf absorbance of the canopy in certain ranges of visible and shortwave infrared spectral regions sensitive to reduction of chlorophyll and other pigments as well as to modifications of water content and turgor.